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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2911 A_BomaMSG_c13128_g1_i1
206bp
FPKM:21.59 TPM:9.65
2912 A_BomaMSG_c13129_g1_i1
210bp
FPKM:0.00 TPM:0.00
2913 A_BomaMSG_c1312_g1_i1
634bp
ankyrin_repeat_domain-containing_protein_17_[Bombyx_mori]
FPKM:3.06 TPM:1.37
2914 A_BomaMSG_c13131_g1_i1
437bp
FPKM:7.73 TPM:3.46
2915 A_BomaMSG_c13132_g1_i1
266bp
uncharacterized_protein_LOC101742736_[Bombyx_mori]
FPKM:3.46 TPM:1.55
2916 A_BomaMSG_c13133_g1_i1
287bp
FPKM:7.34 TPM:3.28
2917 A_BomaMSG_c13134_g1_i1
560bp
PREDICTED:_uncharacterized_protein_LOC107398133_[Tribolium_castaneum]
FPKM:1.48 TPM:0.66
2918 A_BomaMSG_c13136_g1_i1
840bp
USP6_N-terminal-like_protein_isoform_X3_[Bombyx_mori]
GO:0005096 F GTPase activator activity
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0007030 P Golgi organization
GO:0012505 C endomembrane system
GO:0016023 C cytoplasmic vesicle
GO:0017137 F small GTPase binding
GO:0019068 P virion assembly
GO:0031338 P regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0032588 C trans-Golgi network membrane
GO:0035526 P retrograde transport, plasma membrane to Golgi
GO:0048227 P plasma membrane to endosome transport
GO:0090630 P activation of GTPase activity
GO:1902017 P regulation of cilium assembly
GO:1903358 P regulation of Golgi organization
FPKM:4.88 TPM:2.18
2919 A_BomaMSG_c13137_g1_i1
370bp
FPKM:3.06 TPM:1.37
2920 A_BomaMSG_c13138_g1_i1
463bp
TATA-binding_protein-associated_factor_172_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0035562 P negative regulation of chromatin binding
GO:0043231 C intracellular membrane-bounded organelle
GO:0045892 P negative regulation of transcription, DNA-templated
FPKM:3.22 TPM:1.44
2921 A_BomaMSG_c13139_g1_i1
287bp
FPKM:2.94 TPM:1.31
2922 A_BomaMSG_c13140_g1_i1
272bp
FPKM:2.74 TPM:1.23
2923 A_BomaMSG_c13141_g1_i1
207bp
reverse_transcriptase-like_protein_-_silkworm
FPKM:2.24 TPM:1.00
2924 A_BomaMSG_c13142_g1_i1
346bp
uncharacterized_protein_LOC101742357_isoform_X2_[Bombyx_mori]
FPKM:3.43 TPM:1.53
2925 A_BomaMSG_c13143_g1_i1
286bp
PREDICTED:_uncharacterized_protein_LOC105389351_[Plutella_xylostella]
FPKM:1.97 TPM:0.88
2926 A_BomaMSG_c13144_g1_i1
271bp
uncharacterized_protein_LOC110373176_[Helicoverpa_armigera]
FPKM:4.42 TPM:1.98
2927 A_BomaMSG_c13145_g1_i1
418bp
midasin_isoform_X1_[Bombyx_mori]
GO:0000027 P ribosomal large subunit assembly
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006461 P protein-containing complex assembly
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0045111 C intermediate filament cytoskeleton
GO:0051082 F unfolded protein binding
FPKM:2.26 TPM:1.01
2928 A_BomaMSG_c13145_g2_i1
475bp
midasin_isoform_X1_[Bombyx_mori]
GO:0000027 P ribosomal large subunit assembly
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006461 P protein-containing complex assembly
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016887 F ATP hydrolysis activity
GO:0045111 C intermediate filament cytoskeleton
GO:0051082 F unfolded protein binding
FPKM:1.45 TPM:0.65
2929 A_BomaMSG_c13147_g1_i1
531bp
HIG1_domain_family_member_1A,_mitochondrial_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031966 C mitochondrial membrane
GO:0042149 P cellular response to glucose starvation
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
GO:0071456 P cellular response to hypoxia
GO:0071902 P positive regulation of protein serine/threonine kinase activity
GO:0090201 P negative regulation of release of cytochrome c from mitochondria
FPKM:31.62 TPM:14.13
2930 A_BomaMSG_c13148_g1_i1
612bp
NUAK_family_SNF1-like_kinase_1_isoform_X3_[Bombyx_mori]
FPKM:2.48 TPM:1.11
2931 A_BomaMSG_c13149_g1_i1
439bp
microtubule-associated_serine/threonine-protein_kinase_3_isoform_X7_[Bombyx_mori]
FPKM:3.49 TPM:1.56
2932 A_BomaMSG_c13152_g1_i1
389bp
PREDICTED:_dual_specificity_mitogen-activated_protein_kinase_kinase_4-like_[Amyelois_transitella]
FPKM:3.94 TPM:1.76
2933 A_BomaMSG_c13153_g1_i1
213bp
FPKM:4.10 TPM:1.83
2934 A_BomaMSG_c13154_g1_i1
792bp
FPKM:8.49 TPM:3.80
2935 A_BomaMSG_c13155_g1_i1
228bp
peptidyl-prolyl_cis-trans_isomerase_G-like_[Bombyx_mori]
FPKM:10.12 TPM:4.52
2936 A_BomaMSG_c13156_g1_i1
374bp
FPKM:3.60 TPM:1.61
2937 A_BomaMSG_c13157_g1_i1
522bp
uncharacterized_protein_LOC105841508_[Bombyx_mori]
FPKM:3.62 TPM:1.62
2938 A_BomaMSG_c13158_g1_i1
430bp
deoxynucleoside_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004797 F thymidine kinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0006139 P nucleobase-containing compound metabolic process
GO:0006165 P nucleoside diphosphate phosphorylation
GO:0006230 P TMP biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019136 F deoxynucleoside kinase activity
GO:0019206 F nucleoside kinase activity
GO:0046939 P nucleotide phosphorylation
GO:0071897 P DNA biosynthetic process
FPKM:2.16 TPM:0.97
2939 A_BomaMSG_c13159_g1_i1
357bp
FPKM:2.60 TPM:1.16
2940 A_BomaMSG_c13160_g1_i1
921bp
FPKM:2.97 TPM:1.33
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