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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2671 A_BomaMSG_c12888_g1_i1
761bp
phosphatidylinositol_3,4,5-trisphosphate_3-phosphatase_and_dual-specificity_protein_phosphatase_PTEN_isoform_X2_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0001525 P angiogenesis
GO:0001933 P negative regulation of protein phosphorylation
GO:0002902 P regulation of B cell apoptotic process
GO:0004438 F phosphatidylinositol-3-phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005161 F platelet-derived growth factor receptor binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0006629 P lipid metabolic process
GO:0006915 P apoptotic process
GO:0007092 P positive regulation of ubiquitin protein ligase activity
GO:0007270 P neuron-neuron synaptic transmission
GO:0007399 P nervous system development
GO:0007416 P synapse assembly
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0007568 P aging
GO:0007584 P response to nutrient
GO:0007611 P learning or memory
GO:0007613 P memory
GO:0007626 P locomotory behavior
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008284 P positive regulation of cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0009749 P response to glucose
GO:0009898 C cytoplasmic side of plasma membrane
GO:0010033 P response to organic substance
GO:0010035 P response to inorganic substance
GO:0010043 P response to zinc ion
GO:0010975 P regulation of neuron projection development
GO:0010997 F anaphase-promoting complex binding
GO:0014070 P response to organic cyclic compound
GO:0016311 P dephosphorylation
GO:0016314 F phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity
GO:0016324 C apical plasma membrane
GO:0016477 P cell migration
GO:0016605 C PML body
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0019899 F enzyme binding
GO:0019901 F protein kinase binding
GO:0021542 P dentate gyrus development
GO:0021955 P central nervous system neuron axonogenesis
GO:0030165 F PDZ domain binding
GO:0030336 P negative regulation of cell migration
GO:0030534 P adult behavior
GO:0031175 P neuron projection development
GO:0031642 P negative regulation of myelination
GO:0031647 P regulation of protein stability
GO:0031658 P obsolete negative regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle
GO:0032228 P regulation of synaptic transmission, GABAergic
GO:0032286 P central nervous system myelin maintenance
GO:0032355 P response to estradiol
GO:0032535 P regulation of cellular component size
GO:0033032 P regulation of myeloid cell apoptotic process
GO:0033198 P response to ATP
GO:0033555 P multicellular organismal response to stress
GO:0035176 P social behavior
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0035749 C myelin sheath adaxonal region
GO:0036294 P cellular response to decreased oxygen levels
GO:0042493 P response to xenobiotic stimulus
GO:0042711 P maternal behavior
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043005 C neuron projection
GO:0043065 P positive regulation of apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043197 C dendritic spine
GO:0043220 C Schmidt-Lanterman incisure
GO:0043491 P protein kinase B signaling
GO:0043542 P endothelial cell migration
GO:0045211 C postsynaptic membrane
GO:0045471 P response to ethanol
GO:0045475 P locomotor rhythm
GO:0045792 P negative regulation of cell size
GO:0046621 P negative regulation of organ growth
GO:0046685 P response to arsenic-containing substance
GO:0046855 P inositol phosphate dephosphorylation
GO:0046856 P phosphatidylinositol dephosphorylation
GO:0048008 P platelet-derived growth factor receptor signaling pathway
GO:0048679 P regulation of axon regeneration
GO:0048681 P negative regulation of axon regeneration
GO:0048738 P cardiac muscle tissue development
GO:0048853 P forebrain morphogenesis
GO:0048854 P brain morphogenesis
GO:0050680 P negative regulation of epithelial cell proliferation
GO:0050765 P negative regulation of phagocytosis
GO:0050771 P negative regulation of axonogenesis
GO:0050821 P protein stabilization
GO:0051091 P positive regulation of DNA-binding transcription factor activity
GO:0051717 F inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity
GO:0051726 P regulation of cell cycle
GO:0051800 F phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity
GO:0051895 P negative regulation of focal adhesion assembly
GO:0051898 P negative regulation of protein kinase B signaling
GO:0060024 P rhythmic synaptic transmission
GO:0060044 P negative regulation of cardiac muscle cell proliferation
GO:0060070 P canonical Wnt signaling pathway
GO:0060074 P synapse maturation
GO:0060134 P prepulse inhibition
GO:0060179 P male mating behavior
GO:0060291 P long-term synaptic potentiation
GO:0060292 P long-term synaptic depression
GO:0060341 P regulation of cellular localization
GO:0060736 P prostate gland growth
GO:0060997 P dendritic spine morphogenesis
GO:0061002 P negative regulation of dendritic spine morphogenesis
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
GO:0070374 P positive regulation of ERK1 and ERK2 cascade
GO:0071456 P cellular response to hypoxia
GO:0090071 P negative regulation of ribosome biogenesis
GO:0090344 P negative regulation of cell aging
GO:0090394 P negative regulation of excitatory postsynaptic potential
GO:0097105 P presynaptic membrane assembly
GO:0097107 P postsynaptic density assembly
GO:1903984 P positive regulation of TRAIL-activated apoptotic signaling pathway
GO:2000060 P positive regulation of ubiquitin-dependent protein catabolic process
GO:2000134 P negative regulation of G1/S transition of mitotic cell cycle
GO:2000463 P positive regulation of excitatory postsynaptic potential
GO:2000808 P negative regulation of synaptic vesicle clustering
GO:2001235 P positive regulation of apoptotic signaling pathway
FPKM:3.01 TPM:1.35
2672 A_BomaMSG_c12888_g1_i2
421bp
phosphatidylinositol_3,4,5-trisphosphate_3-phosphatase_and_dual-specificity_protein_phosphatase_PTEN_isoform_X2_[Bombyx_mori]
FPKM:2.39 TPM:1.07
2673 A_BomaMSG_c12889_g1_i1
515bp
FPKM:3.87 TPM:1.73
2674 A_BomaMSG_c1288_g1_i1
326bp
FPKM:9.54 TPM:4.26
2675 A_BomaMSG_c12890_g1_i1
467bp
trimethylguanosine_synthase_[Bombyx_mori]
FPKM:3.18 TPM:1.42
2676 A_BomaMSG_c12891_g1_i1
298bp
uncharacterized_protein_LOC101746539_[Bombyx_mori]
FPKM:4.53 TPM:2.03
2677 A_BomaMSG_c12892_g1_i1
2076bp
FPKM:21.05 TPM:9.41
2678 A_BomaMSG_c12893_g1_i1
412bp
mitogen-activated_protein_kinase_kinase_kinase_4_[Bombyx_mori]
FPKM:9.24 TPM:4.13
2679 A_BomaMSG_c12894_g1_i1
643bp
uncharacterized_protein_LOC101738751_[Bombyx_mori]
FPKM:6.01 TPM:2.68
2680 A_BomaMSG_c12895_g1_i1
1127bp
LARGE_xylosyl-_and_glucuronyltransferase_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0003824 F catalytic activity
GO:0005794 C Golgi apparatus
GO:0006486 P protein glycosylation
GO:0008152 P metabolic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0035269 P protein O-linked mannosylation
GO:0042285 F xylosyltransferase activity
GO:0046872 F metal ion binding
FPKM:5.58 TPM:2.49
2681 A_BomaMSG_c12896_g1_i1
477bp
methylcrotonoyl-CoA_carboxylase_subunit_alpha,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0004075 F biotin carboxylase activity
GO:0004485 F methylcrotonoyl-CoA carboxylase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005759 C mitochondrial matrix
GO:0005829 C cytosol
GO:0006552 P leucine catabolic process
GO:0006768 P biotin metabolic process
GO:0009083 P branched-chain amino acid catabolic process
GO:0009374 F biotin binding
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
FPKM:2.68 TPM:1.20
2682 A_BomaMSG_c12897_g1_i1
480bp
THAP_domain-containing_protein_1_[Bombyx_mori]
FPKM:3.13 TPM:1.40
2683 A_BomaMSG_c12897_g1_i2
335bp
THAP_domain-containing_protein_1_[Bombyx_mori]
FPKM:4.96 TPM:2.22
2684 A_BomaMSG_c12898_g1_i1
1043bp
titin_isoform_X2_[Bombyx_mori]
FPKM:4.60 TPM:2.06
2685 A_BomaMSG_c12899_g1_i1
373bp
uncharacterized_protein_LOC101746806_[Bombyx_mori]
FPKM:3.92 TPM:1.75
2686 A_BomaMSG_c1289_g1_i1
603bp
helicase_domino_[Bombyx_mori]
GO:0000123 C histone acetyltransferase complex
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0002165 P instar larval or pupal development
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0007275 P multicellular organism development
GO:0008094 F ATP-dependent activity, acting on DNA
GO:0008283 P cell population proliferation
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016787 F hydrolase activity
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0030097 P hemopoiesis
GO:0030154 P cell differentiation
GO:0035019 P somatic stem cell population maintenance
GO:0035207 P negative regulation of hemocyte proliferation
GO:0035222 P wing disc pattern formation
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0036098 P male germ-line stem cell population maintenance
GO:0043486 P histone exchange
GO:0045747 P positive regulation of Notch signaling pathway
GO:0048477 P oogenesis
GO:0048813 P dendrite morphogenesis
GO:0070983 P dendrite guidance
GO:2000637 P positive regulation of gene silencing by miRNA
FPKM:2.53 TPM:1.13
2687 A_BomaMSG_c12900_g1_i1
215bp
FPKM:5.98 TPM:2.67
2688 A_BomaMSG_c12901_g1_i1
556bp
NADH_dehydrogenase_subunit_1_(mitochondrion)_[Bombyx_mandarina]
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0008137 F NADH dehydrogenase (ubiquinone) activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070469 C respirasome
FPKM:482.63 TPM:215.68
2689 A_BomaMSG_c12902_g1_i1
418bp
Y+L_amino_acid_transporter_2_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005791 C rough endoplasmic reticulum
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0006979 P response to oxidative stress
GO:0007420 P brain development
GO:0009636 P response to toxic substance
GO:0009986 C cell surface
GO:0015171 F amino acid transmembrane transporter activity
GO:0015327 F cystine:glutamate antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035094 P response to nicotine
GO:0043231 C intracellular membrane-bounded organelle
GO:0070306 P lens fiber cell differentiation
GO:0070527 P platelet aggregation
GO:0089711 P L-glutamate transmembrane transport
FPKM:0.65 TPM:0.29
2690 A_BomaMSG_c12902_g1_i2
555bp
Y+L_amino_acid_transporter_2_[Bombyx_mori]
GO:0003333 P amino acid transmembrane transport
GO:0005791 C rough endoplasmic reticulum
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006865 P amino acid transport
GO:0006979 P response to oxidative stress
GO:0007420 P brain development
GO:0009636 P response to toxic substance
GO:0009986 C cell surface
GO:0015171 F amino acid transmembrane transporter activity
GO:0015327 F cystine:glutamate antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035094 P response to nicotine
GO:0043231 C intracellular membrane-bounded organelle
GO:0070306 P lens fiber cell differentiation
GO:0070527 P platelet aggregation
GO:0089711 P L-glutamate transmembrane transport
FPKM:1.40 TPM:0.62
2691 A_BomaMSG_c12903_g1_i1
575bp
mitogen-activated_protein_kinase_kinase_kinase_10_[Bombyx_mori]
FPKM:2.22 TPM:0.99
2692 A_BomaMSG_c12904_g1_i1
1220bp
ornithine_decarboxylase_antizyme_[Bombyx_mori]
GO:0004857 F enzyme inhibitor activity
GO:0008073 F ornithine decarboxylase inhibitor activity
GO:0043086 P negative regulation of catalytic activity
FPKM:155.63 TPM:69.55
2693 A_BomaMSG_c12905_g1_i1
201bp
lethal_protein-like_protein_[Bombyx_mori]
GO:0004368 F glycerol-3-phosphate dehydrogenase (quinone) activity
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0006094 P gluconeogenesis
GO:0009331 C glycerol-3-phosphate dehydrogenase complex
GO:0016491 F oxidoreductase activity
GO:0019563 P glycerol catabolic process
GO:0035264 P multicellular organism growth
GO:0043010 P camera-type eye development
GO:0046872 F metal ion binding
GO:0052590 F sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity
GO:0052591 F sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:11.07 TPM:4.94
2694 A_BomaMSG_c12905_g2_i1
756bp
glycerol-3-phosphate_dehydrogenase_isoform_2_[Bombyx_mori]
GO:0004368 F glycerol-3-phosphate dehydrogenase (quinone) activity
GO:0005509 F calcium ion binding
GO:0005739 C mitochondrion
GO:0006072 P glycerol-3-phosphate metabolic process
GO:0009331 C glycerol-3-phosphate dehydrogenase complex
GO:0016491 F oxidoreductase activity
GO:0019563 P glycerol catabolic process
GO:0046872 F metal ion binding
GO:0052590 F sn-glycerol-3-phosphate:ubiquinone oxidoreductase activity
GO:0052591 F sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
FPKM:2.89 TPM:1.29
2695 A_BomaMSG_c12906_g1_i1
923bp
FPKM:5.40 TPM:2.41
2696 A_BomaMSG_c12907_g1_i1
228bp
FPKM:2.96 TPM:1.32
2697 A_BomaMSG_c12907_g1_i2
288bp
FPKM:7.04 TPM:3.15
2698 A_BomaMSG_c12908_g1_i1
232bp
ankyrin_repeat_domain-containing_protein_29_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
FPKM:8.05 TPM:3.60
2699 A_BomaMSG_c12909_g1_i1
842bp
protein_phosphatase_methylesterase_1_isoform_X4_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0006482 P protein demethylation
GO:0016787 F hydrolase activity
GO:0019901 F protein kinase binding
GO:0019903 F protein phosphatase binding
GO:0051721 F protein phosphatase 2A binding
GO:0051722 F protein C-terminal methylesterase activity
GO:0052689 F carboxylic ester hydrolase activity
FPKM:0.00 TPM:0.00
2700 A_BomaMSG_c12909_g1_i2
910bp
protein_phosphatase_methylesterase_1_isoform_X4_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0006482 P protein demethylation
GO:0016787 F hydrolase activity
GO:0019901 F protein kinase binding
GO:0019903 F protein phosphatase binding
GO:0051721 F protein phosphatase 2A binding
GO:0051722 F protein C-terminal methylesterase activity
GO:0052689 F carboxylic ester hydrolase activity
FPKM:3.37 TPM:1.50
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