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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2641 A_BomaMSG_c12859_g1_i2
226bp
FPKM:0.00 TPM:0.00
2642 A_BomaMSG_c1285_g1_i1
225bp
uncharacterized_protein_LOC101746986_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0006400 P tRNA modification
GO:0008033 P tRNA processing
GO:0016740 F transferase activity
GO:0052381 F tRNA dimethylallyltransferase activity
FPKM:4.37 TPM:1.95
2643 A_BomaMSG_c12860_g1_i1
545bp
tensin_isoform_X5_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005912 C adherens junction
GO:0009986 C cell surface
GO:0030054 C cell junction
FPKM:3.75 TPM:1.68
2644 A_BomaMSG_c12861_g1_i1
573bp
FPKM:3.66 TPM:1.64
2645 A_BomaMSG_c12862_g1_i1
1076bp
vacuolar_ATP_synthase_21_kDa_proteolipid_subunit_[Bombyx_mori]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0005768 C endosome
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007035 P vacuolar acidification
GO:0015078 F proton transmembrane transporter activity
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033177 C proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
FPKM:29.59 TPM:13.22
2646 A_BomaMSG_c12864_g1_i1
325bp
FPKM:4.99 TPM:2.23
2647 A_BomaMSG_c12865_g1_i1
613bp
hypothetical_protein_RR46_07074_[Papilio_xuthus]
FPKM:3.49 TPM:1.56
2648 A_BomaMSG_c12866_g1_i1
889bp
RAD50-interacting_protein_1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0048193 P Golgi vesicle transport
GO:0060628 P regulation of ER to Golgi vesicle-mediated transport
GO:0070939 C Dsl1/NZR complex
GO:1902504 P mitotic G2 DNA damage checkpoint signaling
FPKM:3.01 TPM:1.34
2649 A_BomaMSG_c12866_g2_i1
299bp
RAD50-interacting_protein_1_[Bombyx_mori]
FPKM:6.30 TPM:2.82
2650 A_BomaMSG_c12867_g1_i1
208bp
FPKM:6.62 TPM:2.96
2651 A_BomaMSG_c12868_g1_i1
330bp
FPKM:0.00 TPM:0.00
2652 A_BomaMSG_c12868_g1_i2
472bp
FPKM:6.27 TPM:2.80
2653 A_BomaMSG_c12869_g1_i1
221bp
FPKM:9.20 TPM:4.11
2654 A_BomaMSG_c1286_g1_i1
574bp
LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]
FPKM:2.22 TPM:0.99
2655 A_BomaMSG_c12870_g1_i1
215bp
FPKM:10.97 TPM:4.90
2656 A_BomaMSG_c12871_g1_i1
462bp
uncharacterized_protein_LOC109861940_[Pseudomyrmex_gracilis]
FPKM:2.37 TPM:1.06
2657 A_BomaMSG_c12871_g2_i1
315bp
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC100878911_[Megachile_rotundata]
FPKM:1.22 TPM:0.55
2658 A_BomaMSG_c12872_g1_i1
466bp
von_Willebrand_factor_C_and_EGF_domain-containing_protein_isoform_X1_[Bombyx_mori]
FPKM:3.62 TPM:1.62
2659 A_BomaMSG_c12874_g1_i1
777bp
cullin-2_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0016567 P protein ubiquitination
GO:0030163 P protein catabolic process
GO:0030891 C VCB complex
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031462 C Cul2-RING ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0032403 F protein-containing complex binding
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
FPKM:3.33 TPM:1.49
2660 A_BomaMSG_c12875_g1_i1
516bp
uncharacterized_protein_LOC101738149_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0005794 C Golgi apparatus
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0007507 P heart development
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0046872 F metal ion binding
FPKM:2.76 TPM:1.23
2661 A_BomaMSG_c12876_g1_i1
553bp
FPKM:23.75 TPM:10.61
2662 A_BomaMSG_c12877_g1_i1
465bp
activin_receptor_type-1_isoform_X2_[Bombyx_mori]
FPKM:3.20 TPM:1.43
2663 A_BomaMSG_c12878_g1_i1
331bp
rho_GTPase-activating_protein_7_isoform_X1_[Bombyx_mori]
FPKM:2.23 TPM:1.00
2664 A_BomaMSG_c12879_g1_i1
426bp
ran-binding_protein_3_[Bombyx_mori]
FPKM:6.09 TPM:2.72
2665 A_BomaMSG_c12880_g1_i1
621bp
Copia_protein_[Cyphomyrmex_costatus]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
FPKM:6.43 TPM:2.87
2666 A_BomaMSG_c12881_g1_i1
271bp
FPKM:1.11 TPM:0.49
2667 A_BomaMSG_c12882_g1_i1
695bp
p23-like_protein_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005783 C endoplasmic reticulum
GO:0007030 P Golgi organization
GO:0031965 C nuclear membrane
FPKM:53.16 TPM:23.76
2668 A_BomaMSG_c12885_g1_i1
554bp
FPKM:2.17 TPM:0.97
2669 A_BomaMSG_c12886_g1_i1
301bp
PREDICTED:_uncharacterized_protein_LOC105571233_[Vollenhovia_emeryi]
FPKM:2.22 TPM:0.99
2670 A_BomaMSG_c12887_g1_i1
881bp
heterogeneous_nuclear_ribonucleoprotein_87F_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0030529 C ribonucleoprotein complex
FPKM:79.45 TPM:35.50
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