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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2581 A_BomaMSG_c12808_g1_i1
247bp
FPKM:6.17 TPM:2.76
2582 A_BomaMSG_c12809_g1_i1
344bp
uncharacterized_protein_LOC101740831_isoform_X2_[Bombyx_mori]
FPKM:3.46 TPM:1.55
2583 A_BomaMSG_c12809_g2_i1
251bp
FPKM:3.96 TPM:1.77
2584 A_BomaMSG_c1280_g1_i1
333bp
FPKM:1.84 TPM:0.82
2585 A_BomaMSG_c12810_g1_i1
513bp
FPKM:3.71 TPM:1.66
2586 A_BomaMSG_c12811_g1_i1
647bp
FPKM:2.84 TPM:1.27
2587 A_BomaMSG_c12812_g1_i1
246bp
very_long-chain_specific_acyl-CoA_dehydrogenase,_mitochondrial_[Bombyx_mori]
FPKM:4.85 TPM:2.17
2588 A_BomaMSG_c12813_g1_i1
1841bp
microtubule-associated_protein_RP/EB_family_member_3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005881 C cytoplasmic microtubule
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008017 F microtubule binding
GO:0015630 C microtubule cytoskeleton
GO:0030496 C midbody
GO:0035371 C microtubule plus-end
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048471 C perinuclear region of cytoplasm
GO:0051301 P cell division
GO:1903033 P positive regulation of microtubule plus-end binding
FPKM:50.17 TPM:22.42
2589 A_BomaMSG_c12813_g1_i2
1208bp
microtubule-associated_protein_RP/EB_family_member_3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005881 C cytoplasmic microtubule
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008017 F microtubule binding
GO:0015630 C microtubule cytoskeleton
GO:0030496 C midbody
GO:0035371 C microtubule plus-end
GO:0045737 P positive regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0048471 C perinuclear region of cytoplasm
GO:0051301 P cell division
GO:1903033 P positive regulation of microtubule plus-end binding
FPKM:6.50 TPM:2.91
2590 A_BomaMSG_c12814_g1_i1
946bp
zinc_finger_protein_677_[Bombyx_mori]
FPKM:4.14 TPM:1.85
2591 A_BomaMSG_c12815_g1_i1
593bp
PREDICTED:_uncharacterized_protein_LOC103573760_[Microplitis_demolitor]
FPKM:2.89 TPM:1.29
2592 A_BomaMSG_c12817_g1_i1
1004bp
FPKM:2.60 TPM:1.16
2593 A_BomaMSG_c12818_g1_i1
305bp
FPKM:9.09 TPM:4.06
2594 A_BomaMSG_c12819_g1_i1
333bp
FPKM:17.25 TPM:7.71
2595 A_BomaMSG_c12821_g1_i1
218bp
RNA-directed_DNA_polymerase_from_mobile_element_jockey_[Danaus_plexippus_plexippus]
FPKM:3.83 TPM:1.71
2596 A_BomaMSG_c12823_g1_i1
258bp
FPKM:1.24 TPM:0.55
2597 A_BomaMSG_c12826_g1_i1
448bp
WASH_complex_subunit_3_[Bombyx_mori]
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0006810 P transport
GO:0015031 P protein transport
GO:0071203 C WASH complex
FPKM:2.93 TPM:1.31
2598 A_BomaMSG_c12827_g1_i1
350bp
LOW_QUALITY_PROTEIN:_integrator_complex_subunit_8_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0016180 P snRNA processing
GO:0032039 C integrator complex
FPKM:4.70 TPM:2.10
2599 A_BomaMSG_c12828_g1_i1
312bp
FPKM:2.49 TPM:1.11
2600 A_BomaMSG_c12828_g1_i2
219bp
FPKM:0.00 TPM:0.00
2601 A_BomaMSG_c12829_g1_i1
706bp
disintegrin_and_metalloproteinase_domain-containing_protein_10_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0004222 F metalloendopeptidase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005802 C trans-Golgi network
GO:0006468 P protein phosphorylation
GO:0006508 P proteolysis
GO:0006509 P membrane protein ectodomain proteolysis
GO:0007162 P negative regulation of cell adhesion
GO:0007219 P Notch signaling pathway
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0009986 C cell surface
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0017124 F SH3 domain binding
GO:0019901 F protein kinase binding
GO:0042803 F protein homodimerization activity
GO:0045670 P regulation of osteoclast differentiation
GO:0046872 F metal ion binding
FPKM:3.63 TPM:1.62
2602 A_BomaMSG_c1282_g1_i1
303bp
E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
FPKM:0.86 TPM:0.38
2603 A_BomaMSG_c1282_g1_i2
267bp
E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
FPKM:1.74 TPM:0.78
2604 A_BomaMSG_c12830_g1_i1
832bp
PREDICTED:_WD_repeat-containing_protein_35_isoform_X2_[Papilio_xuthus]
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0005929 C cilium
GO:0005930 C axoneme
GO:0030030 P cell projection organization
GO:0030991 C intraciliary transport particle A
GO:0035091 F phosphatidylinositol binding
GO:0035721 P intraciliary retrograde transport
GO:0036064 C ciliary basal body
GO:0042384 P cilium assembly
GO:0042995 C cell projection
GO:0061512 P protein localization to cilium
GO:0072372 C cilium
GO:0097542 C ciliary tip
FPKM:1.88 TPM:0.84
2605 A_BomaMSG_c12831_g1_i1
312bp
LOW_QUALITY_PROTEIN:_liprin-alpha-1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007269 P neurotransmitter secretion
GO:0009986 C cell surface
GO:0048172 P regulation of short-term neuronal synaptic plasticity
GO:0048786 C presynaptic active zone
FPKM:2.49 TPM:1.11
2606 A_BomaMSG_c12831_g2_i1
238bp
LOW_QUALITY_PROTEIN:_liprin-alpha-1_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0007160 P cell-matrix adhesion
GO:0007165 P signal transduction
GO:0007269 P neurotransmitter secretion
GO:0014047 P glutamate secretion
GO:0048786 C presynaptic active zone
GO:0051497 P negative regulation of stress fiber assembly
GO:0090005 P negative regulation of protein localization to plasma membrane
FPKM:2.74 TPM:1.22
2607 A_BomaMSG_c12831_g2_i2
253bp
LOW_QUALITY_PROTEIN:_liprin-alpha-1_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005925 C focal adhesion
GO:0007160 P cell-matrix adhesion
GO:0007165 P signal transduction
GO:0007269 P neurotransmitter secretion
GO:0014047 P glutamate secretion
GO:0048786 C presynaptic active zone
GO:0051497 P negative regulation of stress fiber assembly
GO:0090005 P negative regulation of protein localization to plasma membrane
FPKM:1.53 TPM:0.68
2608 A_BomaMSG_c12832_g1_i1
499bp
formin-like_protein_CG32138_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003779 F actin binding
GO:0005575 C cellular_component
GO:0016043 P cellular component organization
GO:0017048 F small GTPase binding
GO:0030036 P actin cytoskeleton organization
GO:0048812 P neuron projection morphogenesis
FPKM:2.31 TPM:1.03
2609 A_BomaMSG_c12833_g1_i1
250bp
atherin-like_[Bombyx_mori]
FPKM:3.33 TPM:1.49
2610 A_BomaMSG_c12834_g1_i1
309bp
FPKM:1.69 TPM:0.75
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