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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2221 A_BomaMSG_c12385_g1_i1
345bp
SH3_domain-containing_kinase-binding_protein_1_isoform_X3_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0006915 P apoptotic process
GO:0007010 P cytoskeleton organization
GO:0008360 P regulation of cell shape
GO:0016020 C membrane
GO:0016477 P cell migration
GO:0017124 F SH3 domain binding
GO:0030054 C cell junction
GO:0030139 C endocytic vesicle
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0042981 P regulation of apoptotic process
GO:0043005 C neuron projection
GO:0045202 C synapse
FPKM:3.79 TPM:1.69
2222 A_BomaMSG_c12386_g1_i1
571bp
cycle-like_factor_BmCyc_[Bombyx_mori]
FPKM:2.24 TPM:1.00
2223 A_BomaMSG_c12387_g1_i1
392bp
recQ-mediated_genome_instability_protein_2-like_[Bombyx_mori]
FPKM:1.56 TPM:0.70
2224 A_BomaMSG_c12387_g1_i2
613bp
recQ-mediated_genome_instability_protein_2-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006260 P DNA replication
GO:0008150 P biological_process
FPKM:3.11 TPM:1.39
2225 A_BomaMSG_c12389_g1_i1
339bp
diphthine_methyltransferase_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0016787 F hydrolase activity
GO:0017183 P peptidyl-diphthamide biosynthetic process from peptidyl-histidine
GO:0061685 F diphthine methylesterase activity
FPKM:1.07 TPM:0.48
2226 A_BomaMSG_c12390_g1_i1
364bp
LOW_QUALITY_PROTEIN:_tyrosine-protein_kinase_transmembrane_receptor_Ror_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005030 F neurotrophin receptor activity
GO:0005524 F ATP binding
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0007417 P central nervous system development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0038179 P neurotrophin signaling pathway
FPKM:5.65 TPM:2.53
2227 A_BomaMSG_c12391_g1_i1
211bp
FPKM:11.61 TPM:5.19
2228 A_BomaMSG_c12392_g1_i1
374bp
FPKM:4.41 TPM:1.97
2229 A_BomaMSG_c12393_g1_i1
412bp
FPKM:1.80 TPM:0.80
2230 A_BomaMSG_c12394_g1_i1
305bp
unknown_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2231 A_BomaMSG_c12394_g1_i2
396bp
unknown_[Bombyx_mori]
FPKM:3.28 TPM:1.47
2232 A_BomaMSG_c12395_g1_i1
489bp
FPKM:4.96 TPM:2.22
2233 A_BomaMSG_c12396_g1_i1
257bp
FPKM:5.62 TPM:2.51
2234 A_BomaMSG_c12398_g1_i1
330bp
FPKM:3.73 TPM:1.67
2235 A_BomaMSG_c12399_g1_i1
498bp
AN1-type_zinc_finger_protein_6_isoform_X1_[Bombyx_mori]
FPKM:3.29 TPM:1.47
2236 A_BomaMSG_c1239_g1_i1
280bp
FPKM:6.18 TPM:2.76
2237 A_BomaMSG_c12400_g1_i1
281bp
SH2_domain-containing_protein_4B_[Bombyx_mori]
FPKM:2.05 TPM:0.91
2238 A_BomaMSG_c12401_g1_i1
448bp
armadillo_repeat-containing_protein_5_[Bombyx_mori]
FPKM:2.71 TPM:1.21
2239 A_BomaMSG_c12402_g1_i1
303bp
uncharacterized_protein_LOC101743023_[Bombyx_mori]
FPKM:3.51 TPM:1.57
2240 A_BomaMSG_c12403_g1_i1
563bp
transmembrane_protein_170A_[Bombyx_mori]
GO:0005635 C nuclear envelope
GO:0005789 C endoplasmic reticulum membrane
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0071786 P endoplasmic reticulum tubular network organization
FPKM:2.77 TPM:1.24
2241 A_BomaMSG_c12404_g1_i1
288bp
FPKM:4.86 TPM:2.17
2242 A_BomaMSG_c12406_g1_i1
304bp
FPKM:5.23 TPM:2.34
2243 A_BomaMSG_c12407_g1_i1
535bp
Muscarinic_acetylcholine_receptor_DM1_[Papilio_xuthus]
GO:0004871 F obsolete signal transducer activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0007197 P adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway
GO:0007200 P phospholipase C-activating G protein-coupled receptor signaling pathway
GO:0007207 P phospholipase C-activating G protein-coupled acetylcholine receptor signaling pathway
GO:0007213 P G protein-coupled acetylcholine receptor signaling pathway
GO:0007271 P synaptic transmission, cholinergic
GO:0008227 F G protein-coupled amine receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016907 F G protein-coupled acetylcholine receptor activity
GO:0030054 C cell junction
GO:0045202 C synapse
GO:0045211 C postsynaptic membrane
FPKM:2.80 TPM:1.25
2244 A_BomaMSG_c12409_g1_i1
413bp
FPKM:3.07 TPM:1.37
2245 A_BomaMSG_c1240_g1_i1
277bp
FPKM:2.64 TPM:1.18
2246 A_BomaMSG_c12411_g1_i1
283bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.92 TPM:0.86
2247 A_BomaMSG_c12411_g1_i2
210bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:0.20 TPM:0.09
2248 A_BomaMSG_c12413_g1_i1
320bp
FPKM:7.11 TPM:3.18
2249 A_BomaMSG_c12414_g1_i1
232bp
FPKM:0.80 TPM:0.36
2250 A_BomaMSG_c12415_g1_i1
233bp
FPKM:3.18 TPM:1.42
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