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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2161 A_BomaMSG_c12330_g1_i2
333bp
uncharacterized_protein_LOC101746806_[Bombyx_mori]
FPKM:3.34 TPM:1.49
2162 A_BomaMSG_c12331_g1_i1
501bp
FPKM:6.33 TPM:2.83
2163 A_BomaMSG_c12333_g1_i1
358bp
FPKM:7.76 TPM:3.47
2164 A_BomaMSG_c12334_g1_i1
423bp
uncharacterized_protein_LOC101741811_[Bombyx_mori]
FPKM:4.68 TPM:2.09
2165 A_BomaMSG_c12335_g1_i1
691bp
carboxylesterase_clade_H,_member_1_precursor_[Bombyx_mori]
FPKM:3.98 TPM:1.78
2166 A_BomaMSG_c12336_g1_i1
402bp
FPKM:4.27 TPM:1.91
2167 A_BomaMSG_c12337_g1_i1
340bp
39S_ribosomal_protein_L33,_mitochondrial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0005840 C ribosome
GO:0006412 P translation
GO:0008150 P biological_process
GO:0030529 C ribonucleoprotein complex
FPKM:7.43 TPM:3.32
2168 A_BomaMSG_c12338_g1_i1
436bp
autophagy-related_protein_2_homolog_A_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000407 C phagophore assembly site
GO:0000422 P autophagy of mitochondrion
GO:0005515 F protein binding
GO:0005811 C lipid droplet
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0034045 C phagophore assembly site membrane
GO:0044804 P autophagy of nucleus
FPKM:2.82 TPM:1.26
2169 A_BomaMSG_c12339_g1_i1
286bp
FPKM:4.44 TPM:1.98
2170 A_BomaMSG_c1233_g1_i1
218bp
FPKM:6.70 TPM:2.99
2171 A_BomaMSG_c12340_g1_i1
653bp
FPKM:4.15 TPM:1.85
2172 A_BomaMSG_c12341_g1_i1
648bp
PREDICTED:_uncharacterized_protein_LOC105395769,_partial_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:0.00 TPM:0.00
2173 A_BomaMSG_c12341_g1_i2
723bp
PREDICTED:_uncharacterized_protein_LOC105395769,_partial_[Plutella_xylostella]
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
FPKM:1.53 TPM:0.68
2174 A_BomaMSG_c12342_g1_i1
243bp
FPKM:0.71 TPM:0.32
2175 A_BomaMSG_c12343_g1_i1
626bp
mediator_of_RNA_polymerase_II_transcription_subunit_12_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0001105 F transcription coactivator activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007275 P multicellular organism development
GO:0007406 P negative regulation of neuroblast proliferation
GO:0016592 C mediator complex
GO:0022416 P chaeta development
GO:0030177 P positive regulation of Wnt signaling pathway
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0036011 P imaginal disc-derived leg segmentation
GO:0045498 P sex comb development
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048749 P compound eye development
GO:0070847 C core mediator complex
FPKM:3.96 TPM:1.77
2176 A_BomaMSG_c12344_g1_i1
352bp
FPKM:2.66 TPM:1.19
2177 A_BomaMSG_c12345_g1_i1
236bp
FPKM:6.15 TPM:2.75
2178 A_BomaMSG_c12346_g1_i1
396bp
mediator_of_RNA_polymerase_II_transcription_subunit_1_[Bombyx_mori]
FPKM:3.01 TPM:1.34
2179 A_BomaMSG_c12348_g1_i1
386bp
hypothetical_protein_OCBIM_22002867mg_[Octopus_bimaculoides]
FPKM:1.71 TPM:0.76
2180 A_BomaMSG_c12349_g1_i1
502bp
FPKM:3.25 TPM:1.45
2181 A_BomaMSG_c12350_g1_i1
506bp
guanine_nucleotide-releasing_factor_2_isoform_X16_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0007264 P small GTPase mediated signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007275 P multicellular organism development
GO:0007525 P somatic muscle development
GO:0016203 P muscle attachment
GO:0017034 F guanyl-nucleotide exchange factor activity
GO:0017124 F SH3 domain binding
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045214 P sarcomere organization
FPKM:4.91 TPM:2.20
2182 A_BomaMSG_c12350_g1_i2
358bp
guanine_nucleotide-releasing_factor_2_isoform_X16_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005088 F guanyl-nucleotide exchange factor activity
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0007264 P small GTPase mediated signal transduction
GO:0007265 P Ras protein signal transduction
GO:0007275 P multicellular organism development
GO:0007525 P somatic muscle development
GO:0016203 P muscle attachment
GO:0017034 F guanyl-nucleotide exchange factor activity
GO:0017124 F SH3 domain binding
GO:0043087 P regulation of GTPase activity
GO:0043547 P positive regulation of GTPase activity
GO:0045214 P sarcomere organization
FPKM:0.00 TPM:0.00
2183 A_BomaMSG_c12351_g1_i1
339bp
FPKM:1.78 TPM:0.79
2184 A_BomaMSG_c12352_g1_i1
312bp
FPKM:2.49 TPM:1.11
2185 A_BomaMSG_c12353_g1_i1
281bp
FPKM:5.63 TPM:2.51
2186 A_BomaMSG_c12354_g1_i1
647bp
RNA-binding_protein_42_[Bombyx_mori]
FPKM:1.39 TPM:0.62
2187 A_BomaMSG_c12354_g1_i2
601bp
RNA-binding_protein_42_[Bombyx_mori]
FPKM:3.39 TPM:1.51
2188 A_BomaMSG_c12355_g1_i1
236bp
hypothetical_protein_VO64_2080_[Pseudomonas_fluorescens]
FPKM:6.15 TPM:2.75
2189 A_BomaMSG_c12356_g1_i1
456bp
PI-PLC_X_domain-containing_protein_3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006629 P lipid metabolic process
GO:0008081 F phosphoric diester hydrolase activity
FPKM:2.42 TPM:1.08
2190 A_BomaMSG_c12356_g2_i1
252bp
PI-PLC_X_domain-containing_protein_3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0004871 F obsolete signal transducer activity
GO:0005575 C cellular_component
GO:0006629 P lipid metabolic process
GO:0007165 P signal transduction
GO:0008081 F phosphoric diester hydrolase activity
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
FPKM:1.96 TPM:0.88
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