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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
211 A_BomaMSG_c10280_g1_i1
663bp
chromatin_modification-related_protein_EAF7_[Bombyx_mori]
FPKM:1.05 TPM:0.47
212 A_BomaMSG_c10282_g1_i1
290bp
CWF19-like_protein_2_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0008152 P metabolic process
FPKM:4.79 TPM:2.14
213 A_BomaMSG_c10283_g1_i1
448bp
PREDICTED:_uncharacterized_protein_LOC105396489_[Plutella_xylostella]
FPKM:8.82 TPM:3.94
214 A_BomaMSG_c10284_g1_i1
565bp
uncharacterized_protein_LOC110384740_[Bombyx_mori]
FPKM:2.76 TPM:1.23
215 A_BomaMSG_c10285_g1_i1
535bp
Disco-interacting_protein_2_[Papilio_xuthus]
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0070062 C extracellular exosome
FPKM:3.85 TPM:1.72
216 A_BomaMSG_c10286_g1_i1
659bp
transcription_factor_cwo_isoform_X6_[Bombyx_mori]
FPKM:7.41 TPM:3.31
217 A_BomaMSG_c10288_g1_i1
241bp
uncharacterized_protein_LOC101746965_[Bombyx_mori]
FPKM:2.92 TPM:1.30
218 A_BomaMSG_c10289_g1_i1
1107bp
PREDICTED:_uncharacterized_protein_LOC106717559_[Papilio_machaon]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019012 C virion component
GO:0019031 C viral envelope
GO:0020002 C host cell plasma membrane
GO:0033644 C host cell membrane
GO:0039654 P fusion of virus membrane with host endosome membrane
GO:0039663 P membrane fusion involved in viral entry into host cell
GO:0046718 P viral entry into host cell
GO:0055036 C virion membrane
FPKM:2.11 TPM:0.94
219 A_BomaMSG_c10290_g1_i1
895bp
sex-specific_storage-protein_2_precursor_[Bombyx_mori]
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0045735 F nutrient reservoir activity
FPKM:2.08 TPM:0.93
220 A_BomaMSG_c10291_g1_i1
572bp
Sodium/hydrogen_exchanger_[Operophtera_brumata]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006814 P sodium ion transport
GO:0006885 P regulation of pH
GO:0015297 F antiporter activity
GO:0015299 F solute:proton antiporter activity
GO:0015385 F sodium:proton antiporter activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035725 P sodium ion transmembrane transport
GO:0055085 P transmembrane transport
GO:1902600 P proton transmembrane transport
FPKM:2.07 TPM:0.93
221 A_BomaMSG_c10293_g1_i1
579bp
uncharacterized_protein_LOC101746086_[Bombyx_mori]
FPKM:3.92 TPM:1.75
222 A_BomaMSG_c10294_g1_i1
2404bp
ubiquitin_carboxyl-terminal_hydrolase_14_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016020 C membrane
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0070628 F proteasome binding
FPKM:34.24 TPM:15.30
223 A_BomaMSG_c10295_g1_i1
524bp
autophagy-related_protein_9A_[Bombyx_mori]
GO:0000421 C autophagosome membrane
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006914 P autophagy
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
FPKM:4.86 TPM:2.17
224 A_BomaMSG_c10296_g1_i1
864bp
ATP-binding_cassette_sub-family_B_member_8,_mitochondrial_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006810 P transport
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0042626 F ATPase-coupled transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:2.45 TPM:1.10
225 A_BomaMSG_c10297_g1_i1
325bp
uncharacterized_protein_LOC101738297_[Bombyx_mori]
GO:0046872 F metal ion binding
FPKM:4.99 TPM:2.23
226 A_BomaMSG_c10297_g2_i1
685bp
uncharacterized_protein_LOC101738297_[Bombyx_mori]
GO:0046872 F metal ion binding
FPKM:2.39 TPM:1.07
227 A_BomaMSG_c10298_g1_i1
1346bp
26S_proteasome_non-ATPase_regulatory_subunit_6_[Bombyx_mori]
GO:0000165 P MAPK cascade
GO:0000209 P protein polyubiquitination
GO:0000502 C proteasome complex
GO:0002223 P stimulatory C-type lectin receptor signaling pathway
GO:0002479 P antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005829 C cytosol
GO:0005838 C proteasome regulatory particle
GO:0006508 P proteolysis
GO:0006521 P regulation of cellular amino acid metabolic process
GO:0016887 F ATP hydrolysis activity
GO:0022624 C proteasome accessory complex
GO:0031145 P anaphase-promoting complex-dependent catabolic process
GO:0033209 P tumor necrosis factor-mediated signaling pathway
GO:0038061 P NIK/NF-kappaB signaling
GO:0038095 P Fc-epsilon receptor signaling pathway
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0043488 P regulation of mRNA stability
GO:0050852 P T cell receptor signaling pathway
GO:0051436 P obsolete negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
GO:0051437 P obsolete positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
GO:0060071 P Wnt signaling pathway, planar cell polarity pathway
GO:0070062 C extracellular exosome
GO:0090090 P negative regulation of canonical Wnt signaling pathway
GO:0090263 P positive regulation of canonical Wnt signaling pathway
FPKM:43.18 TPM:19.30
228 A_BomaMSG_c10299_g1_i1
575bp
FPKM:2.38 TPM:1.06
229 A_BomaMSG_c1029_g1_i1
216bp
FPKM:7.87 TPM:3.52
230 A_BomaMSG_c10302_g1_i1
650bp
autophagy_related_protein_Atg8_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000139 C Golgi membrane
GO:0000226 P microtubule cytoskeleton organization
GO:0000421 C autophagosome membrane
GO:0000422 P autophagy of mitochondrion
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005776 C autophagosome
GO:0005790 C smooth endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005930 C axoneme
GO:0006810 P transport
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0006995 P cellular response to nitrogen starvation
GO:0008017 F microtubule binding
GO:0008625 P extrinsic apoptotic signaling pathway via death domain receptors
GO:0012505 C endomembrane system
GO:0015031 P protein transport
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0044297 C cell body
GO:0048471 C perinuclear region of cytoplasm
GO:0048487 F beta-tubulin binding
GO:0050811 F GABA receptor binding
GO:0097225 C sperm midpiece
FPKM:0.00 TPM:0.00
231 A_BomaMSG_c10302_g1_i2
738bp
autophagy_related_protein_Atg8_[Bombyx_mori]
GO:0000045 P autophagosome assembly
GO:0000139 C Golgi membrane
GO:0000226 P microtubule cytoskeleton organization
GO:0000421 C autophagosome membrane
GO:0000422 P autophagy of mitochondrion
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005776 C autophagosome
GO:0005790 C smooth endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005875 C microtubule associated complex
GO:0005886 C plasma membrane
GO:0005930 C axoneme
GO:0006810 P transport
GO:0006914 P autophagy
GO:0006915 P apoptotic process
GO:0006995 P cellular response to nitrogen starvation
GO:0008017 F microtubule binding
GO:0008625 P extrinsic apoptotic signaling pathway via death domain receptors
GO:0012505 C endomembrane system
GO:0015031 P protein transport
GO:0015629 C actin cytoskeleton
GO:0016020 C membrane
GO:0031410 C cytoplasmic vesicle
GO:0031625 F ubiquitin protein ligase binding
GO:0044297 C cell body
GO:0048471 C perinuclear region of cytoplasm
GO:0048487 F beta-tubulin binding
GO:0050811 F GABA receptor binding
GO:0097225 C sperm midpiece
FPKM:1088.45 TPM:486.40
232 A_BomaMSG_c10303_g1_i1
1661bp
1-acyl-sn-glycerol-3-phosphate_acyltransferase_alpha-like_[Bombyx_mori]
GO:0001819 P positive regulation of cytokine production
GO:0003841 F 1-acylglycerol-3-phosphate O-acyltransferase activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006654 P phosphatidic acid biosynthetic process
GO:0008152 P metabolic process
GO:0008544 P epidermis development
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016024 P CDP-diacylglycerol biosynthetic process
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0036276 P response to antidepressant
GO:0046474 P glycerophospholipid biosynthetic process
FPKM:37.16 TPM:16.61
233 A_BomaMSG_c10304_g1_i1
870bp
LOW_QUALITY_PROTEIN:_uncharacterized_protein_KIAA1109_[Bombyx_mori]
FPKM:2.62 TPM:1.17
234 A_BomaMSG_c10305_g1_i1
450bp
zinc_finger_protein_436_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:4.26 TPM:1.90
235 A_BomaMSG_c10306_g1_i1
495bp
huntingtin-interacting_protein_K_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008150 P biological_process
GO:0015630 C microtubule cytoskeleton
FPKM:42.72 TPM:19.09
236 A_BomaMSG_c10307_g1_i1
415bp
protein_IWS1_homolog_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006397 P mRNA processing
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0010793 P regulation of mRNA export from nucleus
GO:0050684 P regulation of mRNA processing
GO:0051028 P mRNA transport
GO:0090239 P regulation of histone H4 acetylation
GO:2001253 P regulation of histone H3-K36 trimethylation
FPKM:5.33 TPM:2.38
237 A_BomaMSG_c10308_g1_i1
486bp
leucine-rich_repeat_protein_soc-2_homolog_[Bombyx_mori]
FPKM:3.40 TPM:1.52
238 A_BomaMSG_c10309_g1_i1
536bp
hypothetical_protein_4_[Lonomia_obliqua]
GO:0003713 F transcription coactivator activity
GO:0005634 C nucleus
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006646 P phosphatidylethanolamine biosynthetic process
GO:0006656 P phosphatidylcholine biosynthetic process
GO:0008195 F phosphatidate phosphatase activity
GO:0009062 P fatty acid catabolic process
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0019432 P triglyceride biosynthetic process
GO:0045944 P positive regulation of transcription by RNA polymerase II
FPKM:5.06 TPM:2.26
239 A_BomaMSG_c1030_g1_i1
302bp
protein_Daple_[Bombyx_mori]
GO:0001932 P regulation of protein phosphorylation
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016055 P Wnt signaling pathway
GO:0030165 F PDZ domain binding
GO:0031098 P stress-activated protein kinase signaling cascade
GO:0031648 P protein destabilization
GO:0043621 F protein self-association
GO:0051260 P protein homooligomerization
FPKM:2.65 TPM:1.18
240 A_BomaMSG_c10310_g1_i1
1224bp
vesicle-trafficking_protein_SEC22b-B_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000149 F SNARE binding
GO:0005484 F SNAP receptor activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0006887 P exocytosis
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0031201 C SNARE complex
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0048280 P vesicle fusion with Golgi apparatus
FPKM:75.67 TPM:33.81
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