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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2071 A_BomaMSG_c12230_g1_i1
378bp
FPKM:2.06 TPM:0.92
2072 A_BomaMSG_c12231_g1_i1
347bp
FPKM:5.80 TPM:2.59
2073 A_BomaMSG_c12232_g1_i1
394bp
FPKM:4.96 TPM:2.22
2074 A_BomaMSG_c12233_g1_i1
318bp
FPKM:4.00 TPM:1.79
2075 A_BomaMSG_c12234_g1_i1
313bp
lysosomal_thioesterase_PPT2_homolog_isoform_X1_[Bombyx_mori]
GO:0005764 C lysosome
GO:0008474 F palmitoyl-(protein) hydrolase activity
GO:0016787 F hydrolase activity
GO:0016790 F thiolester hydrolase activity
GO:0098599 F palmitoyl hydrolase activity
GO:0098734 P macromolecule depalmitoylation
FPKM:6.18 TPM:2.76
2076 A_BomaMSG_c12235_g1_i1
308bp
FPKM:7.22 TPM:3.23
2077 A_BomaMSG_c12236_g1_i1
282bp
FPKM:4.06 TPM:1.81
2078 A_BomaMSG_c12236_g1_i2
228bp
FPKM:0.00 TPM:0.00
2079 A_BomaMSG_c12237_g1_i1
210bp
FPKM:2.14 TPM:0.96
2080 A_BomaMSG_c1223_g1_i1
329bp
FPKM:4.13 TPM:1.84
2081 A_BomaMSG_c12240_g1_i1
250bp
FPKM:10.65 TPM:4.76
2082 A_BomaMSG_c12241_g1_i1
289bp
microtubule-actin_cross-linking_factor_1,_isoforms_1/2/3/5_[Bombyx_mori]
FPKM:1.93 TPM:0.86
2083 A_BomaMSG_c12242_g1_i1
214bp
origin_recognition_complex_subunit_3_isoform_X1_[Bombyx_mori]
FPKM:5.05 TPM:2.26
2084 A_BomaMSG_c12243_g1_i1
209bp
FPKM:8.69 TPM:3.88
2085 A_BomaMSG_c12245_g1_i1
307bp
FPKM:2.73 TPM:1.22
2086 A_BomaMSG_c12246_g1_i1
377bp
FPKM:3.26 TPM:1.46
2087 A_BomaMSG_c12247_g1_i1
294bp
acetyl-coenzyme_A_transporter_1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0007417 P central nervous system development
GO:0008521 F acetyl-CoA transmembrane transporter activity
GO:0015295 F solute:proton symporter activity
GO:0015876 P acetyl-CoA transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030509 P BMP signaling pathway
GO:0060395 P SMAD protein signal transduction
FPKM:0.60 TPM:0.27
2088 A_BomaMSG_c12247_g1_i2
313bp
acetyl-coenzyme_A_transporter_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0008521 F acetyl-CoA transmembrane transporter activity
GO:0015295 F solute:proton symporter activity
GO:0015876 P acetyl-CoA transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030509 P BMP signaling pathway
GO:0055085 P transmembrane transport
GO:0060395 P SMAD protein signal transduction
FPKM:5.65 TPM:2.53
2089 A_BomaMSG_c12248_g1_i1
202bp
FPKM:0.00 TPM:0.00
2090 A_BomaMSG_c12249_g1_i1
290bp
protein_dispatched_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0006887 P exocytosis
GO:0007224 P smoothened signaling pathway
GO:0007275 P multicellular organism development
GO:0007280 P pole cell migration
GO:0008158 F hedgehog receptor activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
FPKM:4.31 TPM:1.93
2091 A_BomaMSG_c1224_g1_i1
246bp
FPKM:4.16 TPM:1.86
2092 A_BomaMSG_c12250_g1_i1
321bp
FPKM:1.96 TPM:0.88
2093 A_BomaMSG_c12253_g1_i1
510bp
FPKM:2.62 TPM:1.17
2094 A_BomaMSG_c12254_g1_i1
382bp
E3_ubiquitin-protein_ligase_TRIM9_isoform_X3_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0008021 C synaptic vesicle
GO:0008270 F zinc ion binding
GO:0016079 P synaptic vesicle exocytosis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0035544 P negative regulation of SNARE complex assembly
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045202 C synapse
GO:0045955 P negative regulation of calcium ion-dependent exocytosis
GO:0046872 F metal ion binding
FPKM:4.16 TPM:1.86
2095 A_BomaMSG_c12254_g1_i2
276bp
E3_ubiquitin-protein_ligase_TRIM9_isoform_X3_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0008021 C synaptic vesicle
GO:0008270 F zinc ion binding
GO:0016079 P synaptic vesicle exocytosis
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030054 C cell junction
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0035544 P negative regulation of SNARE complex assembly
GO:0042803 F protein homodimerization activity
GO:0042995 C cell projection
GO:0043161 P proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045202 C synapse
GO:0045955 P negative regulation of calcium ion-dependent exocytosis
GO:0046872 F metal ion binding
FPKM:1.41 TPM:0.63
2096 A_BomaMSG_c12256_g1_i1
247bp
hypothetical_protein_[Bactrocera_tryoni]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
FPKM:2.74 TPM:1.23
2097 A_BomaMSG_c12257_g1_i1
362bp
transmembrane_protein_11_homolog,_mitochondrial_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0007005 P mitochondrion organization
GO:0007007 P inner mitochondrial membrane organization
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031305 C integral component of mitochondrial inner membrane
GO:0042775 P mitochondrial ATP synthesis coupled electron transport
GO:0070584 P mitochondrion morphogenesis
FPKM:15.54 TPM:6.94
2098 A_BomaMSG_c12258_g1_i1
255bp
FPKM:9.53 TPM:4.26
2099 A_BomaMSG_c12259_g1_i1
494bp
FPKM:5.48 TPM:2.45
2100 A_BomaMSG_c1225_g1_i1
538bp
CCR4-NOT_transcription_complex_subunit_11_[Bombyx_mori]
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0008283 P cell population proliferation
GO:0030014 C CCR4-NOT complex
GO:0031047 P gene silencing by RNA
FPKM:1.91 TPM:0.85
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