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Last updated: 2022/11/18

Search Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology Transcript
Level
2041 A_BomaMSG_c12202_g1_i1
249bp
FPKM:0.67 TPM:0.30
2042 A_BomaMSG_c12203_g1_i1
677bp
glycosyltransferase_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0001744 P insect visual primordium formation
GO:0005576 C extracellular region
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0006486 P protein glycosylation
GO:0006688 P glycosphingolipid biosynthetic process
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007293 P germarium-derived egg chamber formation
GO:0007298 P border follicle cell migration
GO:0007299 P ovarian follicle cell-cell adhesion
GO:0008375 F acetylglucosaminyltransferase activity
GO:0008378 F galactosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016333 P morphogenesis of follicular epithelium
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030707 P ovarian follicle cell development
GO:0042248 P maintenance of polarity of follicular epithelium
GO:0046981 F beta-1,4-mannosylglycolipid beta-1,3-N-acetylglucosaminyltransferase activity
GO:0047915 F ganglioside galactosyltransferase activity
GO:0048477 P oogenesis
FPKM:3.70 TPM:1.66
2043 A_BomaMSG_c12204_g1_i1
225bp
RNA_binding_protein_fox-1_homolog_1-like_isoform_X7_[Bombyx_mori]
FPKM:4.37 TPM:1.95
2044 A_BomaMSG_c12204_g2_i1
376bp
FPKM:2.38 TPM:1.06
2045 A_BomaMSG_c12205_g1_i1
404bp
mothers_against_decapentaplegic_homolog_4_isoform_X2_[Bombyx_mori]
FPKM:1.85 TPM:0.83
2046 A_BomaMSG_c12206_g1_i1
634bp
uncharacterized_protein_LOC101739155_isoform_X1_[Bombyx_mori]
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0006364 P rRNA processing
FPKM:9.74 TPM:4.35
2047 A_BomaMSG_c12207_g1_i1
396bp
FPKM:2.19 TPM:0.98
2048 A_BomaMSG_c12208_g1_i1
259bp
FPKM:3.06 TPM:1.37
2049 A_BomaMSG_c12208_g1_i2
289bp
RNA_exonuclease_4_[Bombyx_mori]
FPKM:2.89 TPM:1.29
2050 A_BomaMSG_c1220_g1_i1
220bp
plasma_membrane_calcium-transporting_ATPase_3_isoform_X9_[Bombyx_mori]
FPKM:3.73 TPM:1.67
2051 A_BomaMSG_c12210_g1_i1
661bp
FPKM:7.38 TPM:3.30
2052 A_BomaMSG_c12211_g1_i1
416bp
zinc_finger_protein_59-like_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001227 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008150 P biological_process
GO:0008327 F methyl-CpG binding
GO:0010428 F methyl-CpNpG binding
GO:0019901 F protein kinase binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
FPKM:6.83 TPM:3.05
2053 A_BomaMSG_c12212_g1_i1
305bp
peptidyl-prolyl_cis-trans_isomerase_sig-7_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000413 P protein peptidyl-prolyl isomerization
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003755 F peptidyl-prolyl cis-trans isomerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006457 P protein folding
GO:0016853 F isomerase activity
GO:0044822 F RNA binding
FPKM:7.79 TPM:3.48
2054 A_BomaMSG_c12214_g1_i1
215bp
N-acetylgalactosamine_kinase_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004335 F galactokinase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006012 P galactose metabolic process
GO:0008152 P metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0033858 F N-acetylgalactosamine kinase activity
GO:0046835 P carbohydrate phosphorylation
FPKM:5.98 TPM:2.67
2055 A_BomaMSG_c12215_g1_i1
225bp
FPKM:4.37 TPM:1.95
2056 A_BomaMSG_c12216_g1_i1
256bp
FPKM:2.52 TPM:1.12
2057 A_BomaMSG_c12217_g1_i1
271bp
FPKM:6.64 TPM:2.97
2058 A_BomaMSG_c12218_g1_i1
216bp
FPKM:5.90 TPM:2.64
2059 A_BomaMSG_c12219_g1_i1
663bp
phosphatidylserine_synthase_1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006659 P phosphatidylserine biosynthetic process
GO:0008654 P phospholipid biosynthetic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
FPKM:3.54 TPM:1.58
2060 A_BomaMSG_c12220_g1_i1
424bp
FPKM:3.68 TPM:1.65
2061 A_BomaMSG_c12221_g1_i1
437bp
PREDICTED:_protein_CutA_homolog_[Papilio_xuthus]
GO:0010038 P response to metal ion
FPKM:14.06 TPM:6.28
2062 A_BomaMSG_c12222_g1_i1
205bp
endonuclease-reverse_transcriptase_[Bombyx_mori]
FPKM:1.15 TPM:0.52
2063 A_BomaMSG_c12223_g1_i1
315bp
FPKM:2.03 TPM:0.91
2064 A_BomaMSG_c12224_g1_i1
514bp
FPKM:2.40 TPM:1.07
2065 A_BomaMSG_c12225_g1_i1
203bp
zonadhesin_isoform_X2_[Bombyx_mori]
FPKM:9.53 TPM:4.26
2066 A_BomaMSG_c12227_g1_i1
417bp
mismatch_repair_endonuclease_PMS2_isoform_X4_[Bombyx_mori]
FPKM:5.29 TPM:2.36
2067 A_BomaMSG_c12227_g1_i2
271bp
mismatch_repair_endonuclease_PMS2_isoform_X4_[Bombyx_mori]
FPKM:0.00 TPM:0.00
2068 A_BomaMSG_c12228_g1_i1
436bp
facilitated_trehalose_transporter_Tret1-like_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015574 F trehalose transmembrane transporter activity
GO:0015767 P lactose transport
GO:0015768 P maltose transport
GO:0015770 P sucrose transport
GO:0015771 P trehalose transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0022857 F transmembrane transporter activity
GO:0022891 F transmembrane transporter activity
GO:0055085 P transmembrane transport
FPKM:4.00 TPM:1.79
2069 A_BomaMSG_c12229_g1_i1
246bp
FPKM:2.08 TPM:0.93
2070 A_BomaMSG_c1222_g1_i1
423bp
MAU2_chromatid_cohesion_factor_protein_[Danaus_plexippus_plexippus]
GO:0000785 C chromatin
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0032116 C SMC loading complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0051301 P cell division
FPKM:3.70 TPM:1.65
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