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Search Assembled RNA-Seq

No.

Name
Length

Chromosome No./Scaffold Id
Scaffold Length

BLAST (vs nr)

Gene ontology

Transcript
Level

2011

A_BomaMSG_c12176_g1_i1

467bp

NUAK_family_SNF1-like_kinase_1_isoform_X3_[Bombyx_mori]

FPKM:2.55 TPM:1.14

2012

A_BomaMSG_c12177_g1_i1

307bp

FPKM:4.90 TPM:2.19

2013

A_BomaMSG_c12177_g1_i2

365bp

FPKM:1.73 TPM:0.77

2014

A_BomaMSG_c12178_g1_i1

278bp

LOW_QUALITY_PROTEIN:_notch-like_protein_isoform_X1_[Bombyx_mori]

FPKM:4.71 TPM:2.10

2015

A_BomaMSG_c12179_g1_i1

291bp

hypothetical_protein_RR48_05184_[Papilio_machaon]

FPKM:2.85 TPM:1.28

2016

A_BomaMSG_c1217_g1_i1

303bp

tyrosine-protein_phosphatase_non-receptor_type_23_[Bombyx_mori]

FPKM:2.63 TPM:1.18

2017

A_BomaMSG_c12180_g1_i1

216bp

FPKM:1.97 TPM:0.88

2018

A_BomaMSG_c12181_g1_i1

1181bp

dynein_assembly_factor_5,_axonemal_[Bombyx_mori]

GO:0003341	P	cilium movement
GO:0005737	C	cytoplasm
GO:0030030	P	cell projection organization
GO:0031514	C	motile cilium
GO:0036158	P	outer dynein arm assembly
GO:0036159	P	inner dynein arm assembly
GO:0045505	F	dynein intermediate chain binding

FPKM:2.29 TPM:1.02

2019

A_BomaMSG_c12182_g1_i1

610bp

uncharacterized_protein_LOC101738032_[Bombyx_mori]

GO:0000287	F	magnesium ion binding
GO:0003676	F	nucleic acid binding
GO:0004518	F	nuclease activity
GO:0004527	F	exonuclease activity
GO:0005634	C	nucleus
GO:0006259	P	DNA metabolic process
GO:0006281	P	DNA repair
GO:0006974	P	cellular response to DNA damage stimulus
GO:0008296	F	3'-5'-exodeoxyribonuclease activity
GO:0008853	F	exodeoxyribonuclease III activity
GO:0016787	F	hydrolase activity
GO:0042803	F	protein homodimerization activity
GO:0046872	F	metal ion binding
GO:0090305	P	nucleic acid phosphodiester bond hydrolysis

FPKM:3.80 TPM:1.70

2020

A_BomaMSG_c12183_g1_i1

275bp

FPKM:12.32 TPM:5.51

2021

A_BomaMSG_c12184_g1_i1

442bp

FPKM:1.61 TPM:0.72

2022

A_BomaMSG_c12185_g1_i1

446bp

prolyl_3-hydroxylase_sudestada1_[Bombyx_mori]

FPKM:4.54 TPM:2.03

2023

A_BomaMSG_c12186_g1_i1

397bp

FPKM:5.44 TPM:2.43

2024

A_BomaMSG_c12187_g1_i1

381bp

FPKM:3.78 TPM:1.69

2025

A_BomaMSG_c12188_g1_i1

846bp

multiple_epidermal_growth_factor-like_domains_protein_8_[Bombyx_mori]

GO:0003143	P	embryonic heart tube morphogenesis
GO:0005509	F	calcium ion binding
GO:0005634	C	nucleus
GO:0010468	P	regulation of gene expression
GO:0016020	C	membrane
GO:0016021	C	integral component of membrane
GO:0030326	P	embryonic limb morphogenesis
GO:0030509	P	BMP signaling pathway
GO:0048704	P	embryonic skeletal system morphogenesis
GO:0048842	P	positive regulation of axon extension involved in axon guidance
GO:0060971	P	embryonic heart tube left/right pattern formation
GO:0060972	P	left/right pattern formation
GO:0061371	P	determination of heart left/right asymmetry
GO:0071907	P	determination of digestive tract left/right asymmetry
GO:0097155	P	fasciculation of sensory neuron axon

FPKM:4.55 TPM:2.03

2026

A_BomaMSG_c12189_g1_i1

451bp

FPKM:2.46 TPM:1.10

2027

A_BomaMSG_c1218_g1_i1

351bp

FPKM:5.35 TPM:2.39

2028

A_BomaMSG_c12190_g1_i1

619bp

LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101740701_[Bombyx_mori]

GO:0005515	F	protein binding
GO:0005737	C	cytoplasm
GO:0005886	C	plasma membrane
GO:0005923	C	bicellular tight junction
GO:0016020	C	membrane
GO:0016324	C	apical plasma membrane
GO:0030054	C	cell junction
GO:0035556	P	intracellular signal transduction
GO:0043234	C	protein-containing complex
GO:0045177	C	apical part of cell
GO:0048471	C	perinuclear region of cytoplasm
GO:0070062	C	extracellular exosome
GO:0070830	P	bicellular tight junction assembly

FPKM:3.30 TPM:1.48

2029

A_BomaMSG_c12192_g1_i1

296bp

FPKM:14.70 TPM:6.57

2030

A_BomaMSG_c12193_g1_i1

258bp

FPKM:0.62 TPM:0.28

2031

A_BomaMSG_c12193_g2_i1

288bp

FPKM:10.69 TPM:4.78

2032

A_BomaMSG_c12194_g1_i1

338bp

FPKM:1.54 TPM:0.69

2033

A_BomaMSG_c12194_g1_i2

249bp

FPKM:0.31 TPM:0.14

2034

A_BomaMSG_c12195_g1_i1

308bp

FPKM:3.82 TPM:1.71

2035

A_BomaMSG_c12198_g1_i1

467bp

uncharacterized_protein_LOC101740309_isoform_X2_[Bombyx_mori]

GO:0000977	F	RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003674	F	molecular_function
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	DNA-binding transcription factor activity
GO:0005515	F	protein binding
GO:0005622	C	intracellular anatomical structure
GO:0005634	C	nucleus
GO:0006351	P	transcription, DNA-templated
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008150	P	biological_process
GO:0046872	F	metal ion binding