SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/104180
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8221 O_BomoIG13637_complete:A_BomoIG_DN29620_c0_g1_i1
342bp
 ribose-phosphate_pyrophosphokinase_2_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0002189 C ribose phosphate diphosphokinase complex
GO:0004749 F ribose phosphate diphosphokinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0006015 P 5-phosphoribose 1-diphosphate biosynthetic process
GO:0006144 P purine nucleobase metabolic process
GO:0006164 P purine nucleotide biosynthetic process
GO:0006167 P AMP biosynthetic process
GO:0007399 P nervous system development
GO:0009156 P ribonucleoside monophosphate biosynthetic process
GO:0009165 P nucleotide biosynthetic process
GO:0016208 F AMP binding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019003 F GDP binding
GO:0019693 P ribose phosphate metabolic process
GO:0030246 F carbohydrate binding
GO:0031100 P animal organ regeneration
GO:0034418 P urate biosynthetic process
GO:0042803 F protein homodimerization activity
GO:0043234 C protein-containing complex
GO:0043531 F ADP binding
GO:0044249 P cellular biosynthetic process
GO:0046101 P hypoxanthine biosynthetic process
GO:0046872 F metal ion binding
8222 O_BomoIG13638_complete:A_BomoIG_DN29680_c0_g1_i1
591bp
 sodium-independent_sulfate_anion_transporter_isoform_X3_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
8223 O_BomoIG13639_complete:A_BomoIG_DN29680_c0_g1_i2
183bp
 sodium-independent_sulfate_anion_transporter_isoform_X3_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
8224 O_BomoIG1363_internal:A_BomoIG_DN30253_c4_g3_i3
99bp
 ubiquilin-1_isoform_X1_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0016235 C aggresome
GO:0016241 P regulation of macroautophagy
GO:0019904 F protein domain specific binding
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031396 P regulation of protein ubiquitination
GO:0031398 P positive regulation of protein ubiquitination
GO:0031410 C cytoplasmic vesicle
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0035973 P aggrephagy
GO:0048471 C perinuclear region of cytoplasm
GO:0071456 P cellular response to hypoxia
GO:1901340 P negative regulation of store-operated calcium channel activity
GO:1902175 P regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
GO:1903071 P positive regulation of ER-associated ubiquitin-dependent protein catabolic process
GO:2000785 P regulation of autophagosome assembly
8225 O_BomoIG13640_internal:A_BomoIG_DN29680_c0_g2_i1
101bp
 TRAS4,_partial_[Bombyx_mori]
8226 O_BomoIG13641_complete:A_BomoIG_DN29680_c0_g1_i3
453bp
 sodium-independent_sulfate_anion_transporter_isoform_X3_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
8227 O_BomoIG13642_complete:A_BomoIG_DN29680_c0_g1_i5
449bp
 sodium-independent_sulfate_anion_transporter_isoform_X4_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
8228 O_BomoIG13643_complete:A_BomoIG_DN29680_c0_g1_i6
222bp
 sodium-independent_sulfate_anion_transporter_isoform_X3_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
8229 O_BomoIG13644_complete:A_BomoIG_DN29680_c0_g1_i9
587bp
 sodium-independent_sulfate_anion_transporter_isoform_X4_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
8230 O_BomoIG13645_3prime_partial:A_BomoIG_DN29680_c0_g1_i10
231bp
 sodium-independent_sulfate_anion_transporter_isoform_X5_[Bombyx_mori]
GO:0005254 F chloride channel activity
GO:0005654 C nucleoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008509 F anion transmembrane transporter activity
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0042391 P regulation of membrane potential
GO:0043231 C intracellular membrane-bounded organelle
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0070062 C extracellular exosome
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
8231 O_BomoIG13646_complete:A_BomoIG_DN29607_c0_g2_i1
255bp
 uncharacterized_protein_LOC101740855_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
8232 O_BomoIG13647_complete:A_BomoIG_DN29607_c0_g2_i1
127bp
8233 O_BomoIG13648_3prime_partial:A_BomoIG_DN29607_c0_g2_i2
375bp
 uncharacterized_protein_LOC101740855_[Bombyx_mori]
GO:0001104 F transcription coregulator activity
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0016592 C mediator complex
8234 O_BomoIG13649_5prime_partial:A_BomoIG_DN29607_c0_g2_i2
122bp
8235 O_BomoIG1364_complete:A_BomoIG_DN30253_c4_g3_i4
168bp
 ubiquilin-1_isoform_X2_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0016235 C aggresome
GO:0016241 P regulation of macroautophagy
GO:0019904 F protein domain specific binding
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031396 P regulation of protein ubiquitination
GO:0031398 P positive regulation of protein ubiquitination
GO:0031410 C cytoplasmic vesicle
GO:0031593 F polyubiquitin modification-dependent protein binding
GO:0035973 P aggrephagy
GO:0048471 C perinuclear region of cytoplasm
GO:0071456 P cellular response to hypoxia
GO:1901340 P negative regulation of store-operated calcium channel activity
GO:1902175 P regulation of oxidative stress-induced intrinsic apoptotic signaling pathway
GO:1903071 P positive regulation of ER-associated ubiquitin-dependent protein catabolic process
GO:2000785 P regulation of autophagosome assembly
8236 O_BomoIG13650_5prime_partial:A_BomoIG_DN29624_c0_g1_i1
444bp
 condensin_complex_subunit_3_isoform_X2_[Bombyx_mori]
GO:0000796 C condensin complex
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0030261 P chromosome condensation
GO:0051301 P cell division
8237 O_BomoIG13651_complete:A_BomoIG_DN29624_c0_g1_i2
1229bp
 condensin_complex_subunit_3_isoform_X1_[Bombyx_mori]
GO:0000796 C condensin complex
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0030261 P chromosome condensation
GO:0051301 P cell division
8238 O_BomoIG13652_complete:A_BomoIG_DN29624_c0_g1_i2
136bp
8239 O_BomoIG13653_complete:A_BomoIG_DN29624_c0_g1_i3
266bp
 condensin_complex_subunit_3_isoform_X2_[Bombyx_mori]
8240 O_BomoIG13654_complete:A_BomoIG_DN29624_c0_g1_i3
126bp
8241 O_BomoIG13655_complete:A_BomoIG_DN29624_c0_g1_i6
1078bp
 condensin_complex_subunit_3_isoform_X1_[Bombyx_mori]
GO:0000796 C condensin complex
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0030261 P chromosome condensation
GO:0051301 P cell division
8242 O_BomoIG13656_complete:A_BomoIG_DN29624_c0_g1_i6
136bp
8243 O_BomoIG13657_complete:A_BomoIG_DN29624_c0_g1_i7
580bp
 condensin_complex_subunit_3_isoform_X2_[Bombyx_mori]
GO:0000796 C condensin complex
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0007076 P mitotic chromosome condensation
GO:0030261 P chromosome condensation
GO:0051301 P cell division
8244 O_BomoIG13658_complete:A_BomoIG_DN29650_c0_g1_i1
420bp
 lipoyltransferase_1,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0006464 P cellular protein modification process
GO:0008150 P biological_process
GO:0009249 P protein lipoylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
8245 O_BomoIG13659_complete:A_BomoIG_DN29650_c0_g1_i2
416bp
 lipoyltransferase_1,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0006464 P cellular protein modification process
GO:0008150 P biological_process
GO:0009249 P protein lipoylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
8246 O_BomoIG1365_complete:A_BomoIG_DN30253_c4_g4_i1
512bp
 protein_halfway_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0035073 P pupariation
GO:0035075 P response to ecdysone
GO:0035556 P intracellular signal transduction
8247 O_BomoIG13660_complete:A_BomoIG_DN29650_c0_g1_i3
112bp
 lipoyltransferase_1,_mitochondrial_isoform_X2_[Bombyx_mori]
8248 O_BomoIG13661_complete:A_BomoIG_DN29650_c0_g1_i4
416bp
 lipoyltransferase_1,_mitochondrial_isoform_X2_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005739 C mitochondrion
GO:0006464 P cellular protein modification process
GO:0008150 P biological_process
GO:0009249 P protein lipoylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
8249 O_BomoIG13662_complete:A_BomoIG_DN29650_c1_g1_i1
464bp
 transmembrane_9_superfamily_member_4_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
8250 O_BomoIG13663_complete:A_BomoIG_DN29650_c1_g1_i2
282bp
 transmembrane_9_superfamily_member_4_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
previous next from show/104180

- SilkBase 1999-2023 -