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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
8191 O_BomoIG1360_complete:A_BomoIG_DN30221_c0_g1_i3
130bp
8192 O_BomoIG13610_complete:A_BomoIG_DN29672_c0_g1_i5
1001bp
 guanine_nucleotide_exchange_factor_DBS_isoform_X6_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0035091 F phosphatidylinositol binding
GO:0035556 P intracellular signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
8193 O_BomoIG13611_complete:A_BomoIG_DN29672_c0_g1_i6
1002bp
 guanine_nucleotide_exchange_factor_DBS_isoform_X4_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0035091 F phosphatidylinositol binding
GO:0035556 P intracellular signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
8194 O_BomoIG13612_complete:A_BomoIG_DN29672_c0_g1_i7
1001bp
 guanine_nucleotide_exchange_factor_DBS_isoform_X5_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0035091 F phosphatidylinositol binding
GO:0035556 P intracellular signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
8195 O_BomoIG13613_complete:A_BomoIG_DN29672_c0_g1_i8
960bp
 guanine_nucleotide_exchange_factor_DBS_isoform_X4_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0035091 F phosphatidylinositol binding
GO:0035556 P intracellular signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
8196 O_BomoIG13614_complete:A_BomoIG_DN29672_c0_g1_i8
119bp
8197 O_BomoIG13615_complete:A_BomoIG_DN29672_c0_g1_i9
960bp
 guanine_nucleotide_exchange_factor_DBS_isoform_X4_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0035091 F phosphatidylinositol binding
GO:0035556 P intracellular signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
8198 O_BomoIG13616_complete:A_BomoIG_DN29672_c0_g1_i10
1043bp
 guanine_nucleotide_exchange_factor_DBS_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0035091 F phosphatidylinositol binding
GO:0035556 P intracellular signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
8199 O_BomoIG13617_complete:A_BomoIG_DN29672_c0_g1_i11
960bp
 guanine_nucleotide_exchange_factor_DBS_isoform_X4_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0035091 F phosphatidylinositol binding
GO:0035556 P intracellular signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
8200 O_BomoIG13618_5prime_partial:A_BomoIG_DN29677_c2_g1_i1
122bp
8201 O_BomoIG13619_3prime_partial:A_BomoIG_DN29683_c0_g1_i1
523bp
 gastrula_zinc_finger_protein_xFG20-1_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008150 P biological_process
GO:0046872 F metal ion binding
8202 O_BomoIG1361_complete:A_BomoIG_DN30221_c0_g1_i4
130bp
8203 O_BomoIG13620_5prime_partial:A_BomoIG_DN29683_c0_g2_i1
104bp
 gastrula_zinc_finger_protein_xFG20-1_[Bombyx_mori]
8204 O_BomoIG13621_5prime_partial:A_BomoIG_DN29678_c0_g1_i1
299bp
 band_7_protein_AGAP004871_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
8205 O_BomoIG13622_complete:A_BomoIG_DN29678_c0_g1_i1
134bp
8206 O_BomoIG13623_complete:A_BomoIG_DN29678_c0_g1_i1
120bp
 hypothetical_protein_FF38_06748_[Lucilia_cuprina]
8207 O_BomoIG13624_3prime_partial:A_BomoIG_DN29613_c0_g1_i2
371bp
 RNA_polymerase_II_elongation_factor_Ell_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0015979 P photosynthesis
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035327 C euchromatin
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0043620 P regulation of DNA-templated transcription in response to stress
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0070063 F RNA polymerase binding
8208 O_BomoIG13625_complete:A_BomoIG_DN29613_c0_g1_i2
139bp
8209 O_BomoIG13626_3prime_partial:A_BomoIG_DN29613_c0_g1_i3
254bp
 RNA_polymerase_II_elongation_factor_Ell_[Bombyx_mori]
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005703 C polytene chromosome puff
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006368 P transcription elongation from RNA polymerase II promoter
GO:0008023 C transcription elongation factor complex
GO:0015979 P photosynthesis
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035327 C euchromatin
GO:0042795 P snRNA transcription by RNA polymerase II
GO:0043620 P regulation of DNA-templated transcription in response to stress
GO:0048190 P wing disc dorsal/ventral pattern formation
GO:0070063 F RNA polymerase binding
8210 O_BomoIG13627_3prime_partial:A_BomoIG_DN29649_c0_g1_i1
269bp
 43_kDa_receptor-associated_protein_of_the_synapse_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0007268 P chemical synaptic transmission
GO:0008270 F zinc ion binding
GO:0033130 F acetylcholine receptor binding
GO:0043495 F protein-membrane adaptor activity
GO:0045202 C synapse
GO:0046872 F metal ion binding
8211 O_BomoIG13628_complete:A_BomoIG_DN29649_c0_g1_i1
141bp
8212 O_BomoIG13629_3prime_partial:A_BomoIG_DN29649_c0_g1_i2
269bp
 43_kDa_receptor-associated_protein_of_the_synapse_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0007268 P chemical synaptic transmission
GO:0008270 F zinc ion binding
GO:0033130 F acetylcholine receptor binding
GO:0043495 F protein-membrane adaptor activity
GO:0045202 C synapse
GO:0046872 F metal ion binding
8213 O_BomoIG1362_complete:A_BomoIG_DN30253_c4_g3_i2
139bp
 ubiquilin-1_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0005886 C plasma membrane
GO:0006914 P autophagy
GO:0016020 C membrane
GO:0016241 P regulation of macroautophagy
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031410 C cytoplasmic vesicle
GO:1900186 P negative regulation of clathrin-dependent endocytosis
GO:1903071 P positive regulation of ER-associated ubiquitin-dependent protein catabolic process
GO:1904021 P negative regulation of G protein-coupled receptor internalization
GO:2000785 P regulation of autophagosome assembly
8214 O_BomoIG13630_5prime_partial:A_BomoIG_DN29649_c0_g1_i2
184bp
8215 O_BomoIG13631_complete:A_BomoIG_DN29649_c0_g1_i2
141bp
8216 O_BomoIG13632_3prime_partial:A_BomoIG_DN29649_c0_g1_i3
269bp
 43_kDa_receptor-associated_protein_of_the_synapse_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0007268 P chemical synaptic transmission
GO:0008270 F zinc ion binding
GO:0033130 F acetylcholine receptor binding
GO:0043495 F protein-membrane adaptor activity
GO:0045202 C synapse
GO:0046872 F metal ion binding
8217 O_BomoIG13633_complete:A_BomoIG_DN29649_c0_g1_i3
141bp
8218 O_BomoIG13634_complete:A_BomoIG_DN29674_c0_g1_i1
465bp
 broad-complex_core_protein_isoforms_1/2/3/4/5_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007552 P metamorphosis
GO:0007562 P eclosion
GO:0008219 P cell death
GO:0009608 P response to symbiont
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0030707 P ovarian follicle cell development
GO:0035070 P salivary gland histolysis
GO:0035071 P salivary gland cell autophagic cell death
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0035075 P response to ecdysone
GO:0035193 P larval central nervous system remodeling
GO:0040034 P regulation of development, heterochronic
GO:0042332 P gravitaxis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0048747 P muscle cell development
GO:0048808 P male genitalia morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0071390 P cellular response to ecdysone
8219 O_BomoIG13635_complete:A_BomoIG_DN29674_c0_g1_i2
465bp
 broad-complex_core_protein_isoforms_1/2/3/4/5_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007552 P metamorphosis
GO:0007562 P eclosion
GO:0008219 P cell death
GO:0009608 P response to symbiont
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0030707 P ovarian follicle cell development
GO:0035070 P salivary gland histolysis
GO:0035071 P salivary gland cell autophagic cell death
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0035075 P response to ecdysone
GO:0035193 P larval central nervous system remodeling
GO:0040034 P regulation of development, heterochronic
GO:0042332 P gravitaxis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0048747 P muscle cell development
GO:0048808 P male genitalia morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0071390 P cellular response to ecdysone
8220 O_BomoIG13636_complete:A_BomoIG_DN29674_c0_g1_i3
291bp
 broad-complex_core_protein_isoforms_1/2/3/4/5_[Bombyx_mori]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0001752 P compound eye photoreceptor fate commitment
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0006914 P autophagy
GO:0007275 P multicellular organism development
GO:0007458 P progression of morphogenetic furrow involved in compound eye morphogenesis
GO:0007552 P metamorphosis
GO:0007562 P eclosion
GO:0008219 P cell death
GO:0009608 P response to symbiont
GO:0010629 P negative regulation of gene expression
GO:0010906 P regulation of glucose metabolic process
GO:0030707 P ovarian follicle cell development
GO:0035070 P salivary gland histolysis
GO:0035071 P salivary gland cell autophagic cell death
GO:0035072 P ecdysone-mediated induction of salivary gland cell autophagic cell death
GO:0035075 P response to ecdysone
GO:0035193 P larval central nervous system remodeling
GO:0040034 P regulation of development, heterochronic
GO:0042332 P gravitaxis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048477 P oogenesis
GO:0048747 P muscle cell development
GO:0048808 P male genitalia morphogenesis
GO:0048813 P dendrite morphogenesis
GO:0071390 P cellular response to ecdysone
previous next from show/104180

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