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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7261 O_BomoIG12773_complete:A_BomoIG_DN31306_c1_g1_i8
134bp
 E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
7262 O_BomoIG12774_3prime_partial:A_BomoIG_DN31306_c1_g1_i9
1085bp
 E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
7263 O_BomoIG12775_complete:A_BomoIG_DN31306_c1_g1_i9
223bp
7264 O_BomoIG12776_complete:A_BomoIG_DN31306_c1_g1_i9
216bp
7265 O_BomoIG12777_complete:A_BomoIG_DN31306_c1_g1_i9
112bp
7266 O_BomoIG12778_3prime_partial:A_BomoIG_DN31306_c1_g1_i11
723bp
 E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0003146 P heart jogging
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006412 P translation
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0009303 P rRNA transcription
GO:0010468 P regulation of gene expression
GO:0035118 P embryonic pectoral fin morphogenesis
GO:0048565 P digestive tract development
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
7267 O_BomoIG12779_complete:A_BomoIG_DN31306_c1_g1_i11
223bp
7268 O_BomoIG1277_3prime_partial:A_BomoIG_DN30254_c3_g1_i1
106bp
7269 O_BomoIG12780_complete:A_BomoIG_DN31306_c1_g1_i11
216bp
7270 O_BomoIG12781_complete:A_BomoIG_DN31306_c1_g1_i11
112bp
7271 O_BomoIG12782_internal:A_BomoIG_DN31306_c1_g1_i12
469bp
 E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0003146 P heart jogging
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006412 P translation
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0009303 P rRNA transcription
GO:0010468 P regulation of gene expression
GO:0035118 P embryonic pectoral fin morphogenesis
GO:0048565 P digestive tract development
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
7272 O_BomoIG12783_complete:A_BomoIG_DN31306_c1_g1_i12
223bp
7273 O_BomoIG12784_complete:A_BomoIG_DN31306_c1_g1_i12
112bp
7274 O_BomoIG12785_complete:A_BomoIG_DN31306_c1_g1_i13
152bp
 E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
7275 O_BomoIG12786_3prime_partial:A_BomoIG_DN31306_c1_g1_i14
515bp
 E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0003146 P heart jogging
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006412 P translation
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0009303 P rRNA transcription
GO:0010468 P regulation of gene expression
GO:0035118 P embryonic pectoral fin morphogenesis
GO:0048565 P digestive tract development
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
7276 O_BomoIG12787_complete:A_BomoIG_DN31306_c1_g1_i14
223bp
7277 O_BomoIG12788_complete:A_BomoIG_DN31306_c1_g1_i14
131bp
 DUF3300_domain-containing_protein_[Bradyrhizobium_sp._CCBAU_15635]
GO:0001731 P formation of translation preinitiation complex
GO:0003743 F translation initiation factor activity
GO:0005737 C cytoplasm
GO:0005852 C eukaryotic translation initiation factor 3 complex
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006446 P regulation of translational initiation
GO:0016282 C eukaryotic 43S preinitiation complex
GO:0033290 C eukaryotic 48S preinitiation complex
7278 O_BomoIG12789_complete:A_BomoIG_DN31306_c1_g1_i14
112bp
7279 O_BomoIG1278_complete:A_BomoIG_DN30254_c3_g1_i1
101bp
7280 O_BomoIG12790_3prime_partial:A_BomoIG_DN31306_c1_g1_i15
934bp
 E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
7281 O_BomoIG12791_complete:A_BomoIG_DN31306_c1_g1_i15
223bp
7282 O_BomoIG12792_complete:A_BomoIG_DN31306_c1_g1_i15
216bp
7283 O_BomoIG12793_complete:A_BomoIG_DN31306_c1_g1_i15
176bp
 E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
7284 O_BomoIG12794_complete:A_BomoIG_DN31306_c1_g1_i15
123bp
7285 O_BomoIG12795_complete:A_BomoIG_DN31306_c1_g1_i15
112bp
7286 O_BomoIG12796_5prime_partial:A_BomoIG_DN31310_c6_g1_i1
274bp
 hypothetical_protein_KGM_214563_[Danaus_plexippus_plexippus]
7287 O_BomoIG12797_5prime_partial:A_BomoIG_DN31310_c6_g1_i2
274bp
 hypothetical_protein_KGM_214563_[Danaus_plexippus_plexippus]
7288 O_BomoIG12798_complete:A_BomoIG_DN31310_c6_g1_i3
199bp
 hypothetical_protein_KGM_214563_[Danaus_plexippus_plexippus]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
7289 O_BomoIG12799_complete:A_BomoIG_DN31310_c9_g3_i1
115bp
7290 O_BomoIG1279_5prime_partial:A_BomoIG_DN30254_c4_g1_i1
172bp
 DNA_polymerase_subunit_gamma-1,_mitochondrial_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003887 F DNA-directed DNA polymerase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005760 C gamma DNA polymerase complex
GO:0006260 P DNA replication
GO:0006261 P DNA-dependent DNA replication
GO:0006264 P mitochondrial DNA replication
GO:0007562 P eclosion
GO:0008296 F 3'-5'-exodeoxyribonuclease activity
GO:0008340 P determination of adult lifespan
GO:0008408 F 3'-5' exonuclease activity
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
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