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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7231 O_BomoIG12746_3prime_partial:A_BomoIG_DN31377_c0_g1_i16
1184bp
 PREDICTED:_collagen_alpha-5(IV)_chain_isoform_X1_[Trachymyrmex_zeteki]
GO:0002119 P nematode larval development
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005604 C basement membrane
GO:0007517 P muscle organ development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0030198 P extracellular matrix organization
GO:0050714 P positive regulation of protein secretion
7232 O_BomoIG12747_complete:A_BomoIG_DN31377_c0_g1_i16
289bp
7233 O_BomoIG12748_5prime_partial:A_BomoIG_DN31377_c0_g1_i16
208bp
 PREDICTED:_uncharacterized_protein_LOC106961309_isoform_X5_[Poecilia_latipinna]
7234 O_BomoIG12749_complete:A_BomoIG_DN31377_c0_g1_i16
169bp
7235 O_BomoIG1274_complete:A_BomoIG_DN30213_c4_g1_i1
110bp
7236 O_BomoIG12750_internal:A_BomoIG_DN31377_c0_g1_i17
483bp
 Collagen_alpha-2(IV)_chain_[Trachymyrmex_cornetzi]
GO:0002119 P nematode larval development
GO:0005201 F extracellular matrix structural constituent
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005581 C collagen trimer
GO:0005604 C basement membrane
GO:0007517 P muscle organ development
GO:0009792 P embryo development ending in birth or egg hatching
GO:0030198 P extracellular matrix organization
GO:0050714 P positive regulation of protein secretion
7237 O_BomoIG12751_3prime_partial:A_BomoIG_DN31377_c0_g1_i17
213bp
 PREDICTED:_cerebellar_degeneration-related_antigen_1,_partial_[Bison_bison_bison]
7238 O_BomoIG12752_5prime_partial:A_BomoIG_DN31377_c0_g1_i17
150bp
 Uncharacterised_protein_[Streptococcus_pneumoniae]
7239 O_BomoIG12753_5prime_partial:A_BomoIG_DN31377_c0_g1_i17
106bp
 putative_peptidoglycan_bound_protein_[Acinetobacter_gerneri_MTCC_9824]
7240 O_BomoIG12754_3prime_partial:A_BomoIG_DN31306_c1_g1_i1
1120bp
 E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
7241 O_BomoIG12755_complete:A_BomoIG_DN31306_c1_g1_i1
223bp
7242 O_BomoIG12756_complete:A_BomoIG_DN31306_c1_g1_i1
216bp
7243 O_BomoIG12757_complete:A_BomoIG_DN31306_c1_g1_i1
123bp
7244 O_BomoIG12758_complete:A_BomoIG_DN31306_c1_g1_i1
112bp
7245 O_BomoIG12759_3prime_partial:A_BomoIG_DN31306_c1_g1_i2
874bp
 E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
7246 O_BomoIG1275_complete:A_BomoIG_DN30213_c4_g1_i2
151bp
 uncharacterized_protein_LOC101742884_[Bombyx_mori]
7247 O_BomoIG12760_complete:A_BomoIG_DN31306_c1_g1_i2
223bp
7248 O_BomoIG12761_complete:A_BomoIG_DN31306_c1_g1_i2
216bp
7249 O_BomoIG12762_complete:A_BomoIG_DN31306_c1_g1_i2
112bp
7250 O_BomoIG12763_5prime_partial:A_BomoIG_DN31306_c1_g1_i4
200bp
 E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0000209 P protein polyubiquitination
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
7251 O_BomoIG12764_3prime_partial:A_BomoIG_DN31306_c1_g1_i5
743bp
 E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0003146 P heart jogging
GO:0003682 F chromatin binding
GO:0005634 C nucleus
GO:0006412 P translation
GO:0007049 P cell cycle
GO:0007064 P mitotic sister chromatid cohesion
GO:0007417 P central nervous system development
GO:0007507 P heart development
GO:0009303 P rRNA transcription
GO:0010468 P regulation of gene expression
GO:0035118 P embryonic pectoral fin morphogenesis
GO:0048565 P digestive tract development
GO:0048703 P embryonic viscerocranium morphogenesis
GO:0060828 P regulation of canonical Wnt signaling pathway
GO:0071733 P obsolete transcriptional activation by promoter-enhancer looping
7252 O_BomoIG12765_complete:A_BomoIG_DN31306_c1_g1_i5
223bp
7253 O_BomoIG12766_complete:A_BomoIG_DN31306_c1_g1_i5
216bp
7254 O_BomoIG12767_complete:A_BomoIG_DN31306_c1_g1_i5
112bp
7255 O_BomoIG12768_3prime_partial:A_BomoIG_DN31306_c1_g1_i6
874bp
 E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
GO:0001701 P in utero embryonic development
GO:0003676 F nucleic acid binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0006260 P DNA replication
GO:0006275 P regulation of DNA replication
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0035264 P multicellular organism growth
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
GO:0048568 P embryonic organ development
GO:0061053 P somite development
GO:0061630 F ubiquitin protein ligase activity
7256 O_BomoIG12769_complete:A_BomoIG_DN31306_c1_g1_i6
223bp
7257 O_BomoIG1276_5prime_partial:A_BomoIG_DN30254_c3_g1_i1
168bp
 monocarboxylate_transporter_5_[Bombyx_mori]
7258 O_BomoIG12770_complete:A_BomoIG_DN31306_c1_g1_i6
216bp
7259 O_BomoIG12771_complete:A_BomoIG_DN31306_c1_g1_i6
112bp
7260 O_BomoIG12772_internal:A_BomoIG_DN31306_c1_g6_i1
521bp
 E3_ubiquitin-protein_ligase_RBBP6_[Bombyx_mori]
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