Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
721	O_BomoIG10064_complete:A_BomoIG_DN33756_c1_g1_i3 114bp	Bomo_Chr7
722	O_BomoIG100650_internal:A_BomoIG_DN31541_c1_g3_i27 101bp	Bomo_Chr12
723	O_BomoIG100651_complete:A_BomoIG_DN31541_c1_g3_i28 243bp	Bomo_Chr12	CUGBP_Elav-like_family_member_4_isoform_X6_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006397 P mRNA processing
724	O_BomoIG100652_complete:A_BomoIG_DN31541_c1_g3_i28 160bp	Bomo_Chr12	CUGBP_Elav-like_family_member_4_isoform_X6_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006397 P mRNA processing GO:0048026 P positive regulation of mRNA splicing, via spliceosome
725	O_BomoIG100653_complete:A_BomoIG_DN31541_c1_g3_i28 134bp	Bomo_Chr12
726	O_BomoIG100654_5prime_partial:A_BomoIG_DN31541_c1_g1_i9 113bp	Bomo_Chr25	PREDICTED:_homeobox_protein_homothorax-like_[Plutella_xylostella]	GO:0000060 P obsolete protein import into nucleus, translocation GO:0001654 P eye development GO:0001752 P compound eye photoreceptor fate commitment GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005515 F protein binding GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0007275 P multicellular organism development GO:0007380 P specification of segmental identity, head GO:0007383 P specification of segmental identity, antennal segment GO:0007420 P brain development GO:0007422 P peripheral nervous system development GO:0007432 P salivary gland boundary specification GO:0007476 P imaginal disc-derived wing morphogenesis GO:0007479 P leg disc proximal/distal pattern formation GO:0007480 P imaginal disc-derived leg morphogenesis GO:0007525 P somatic muscle development GO:0008134 F transcription factor binding GO:0009954 P proximal/distal pattern formation GO:0010092 P specification of animal organ identity GO:0034504 P protein localization to nucleus GO:0035282 P segmentation GO:0035326 F cis-regulatory region sequence-specific DNA binding GO:0042659 P regulation of cell fate specification GO:0045664 P regulation of neuron differentiation GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0048735 P haltere morphogenesis GO:0048749 P compound eye development GO:0060323 P head morphogenesis GO:0090098 P positive regulation of BMP signaling pathway
727	O_BomoIG100655_5prime_partial:A_BomoIG_DN31541_c1_g1_i10 350bp	Bomo_Chr25	homeobox_protein_homothorax-like_[Bombyx_mori]	GO:0000060 P obsolete protein import into nucleus, translocation GO:0001654 P eye development GO:0001752 P compound eye photoreceptor fate commitment GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005515 F protein binding GO:0005634 C nucleus GO:0005667 C transcription regulator complex GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0007275 P multicellular organism development GO:0007380 P specification of segmental identity, head GO:0007383 P specification of segmental identity, antennal segment GO:0007420 P brain development GO:0007422 P peripheral nervous system development GO:0007432 P salivary gland boundary specification GO:0007476 P imaginal disc-derived wing morphogenesis GO:0007479 P leg disc proximal/distal pattern formation GO:0007480 P imaginal disc-derived leg morphogenesis GO:0007525 P somatic muscle development GO:0008134 F transcription factor binding GO:0009954 P proximal/distal pattern formation GO:0010092 P specification of animal organ identity GO:0034504 P protein localization to nucleus GO:0035282 P segmentation GO:0035326 F cis-regulatory region sequence-specific DNA binding GO:0042659 P regulation of cell fate specification GO:0045664 P regulation of neuron differentiation GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0048735 P haltere morphogenesis GO:0048749 P compound eye development GO:0060323 P head morphogenesis GO:0090098 P positive regulation of BMP signaling pathway
728	O_BomoIG100656_complete:A_BomoIG_DN31541_c1_g1_i10 160bp	Bomo_Chr25
729	O_BomoIG100657_complete:A_BomoIG_DN31541_c1_g1_i10 122bp	Bomo_Chr25
730	O_BomoIG100658_complete:A_BomoIG_DN31541_c1_g1_i10 105bp	Bomo_Chr25
731	O_BomoIG100659_complete:A_BomoIG_DN31541_c1_g3_i29 368bp	Bomo_Chr12	CUGBP_Elav-like_family_member_3_isoform_X2_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006397 P mRNA processing GO:0048026 P positive regulation of mRNA splicing, via spliceosome
732	O_BomoIG10065_3prime_partial:A_BomoIG_DN33756_c1_g4_i1 320bp	Bomo_Chr5	eukaryotic_translation_initiation_factor_3_subunit_E_[Bombyx_mori]	GO:0001731 P formation of translation preinitiation complex GO:0003743 F translation initiation factor activity GO:0005737 C cytoplasm GO:0005852 C eukaryotic translation initiation factor 3 complex GO:0006412 P translation GO:0006413 P translational initiation GO:0006446 P regulation of translational initiation GO:0016282 C eukaryotic 43S preinitiation complex GO:0033290 C eukaryotic 48S preinitiation complex
733	O_BomoIG100660_complete:A_BomoIG_DN31541_c1_g3_i29 134bp	Bomo_Chr12
734	O_BomoIG100661_complete:A_BomoIG_DN31541_c1_g3_i30 386bp	Bomo_Chr12	CUGBP_Elav-like_family_member_4_isoform_X4_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006397 P mRNA processing GO:0008380 P RNA splicing GO:0048026 P positive regulation of mRNA splicing, via spliceosome
735	O_BomoIG100662_complete:A_BomoIG_DN31541_c1_g3_i30 122bp	Bomo_Chr12
736	O_BomoIG100663_5prime_partial:A_BomoIG_DN31541_c1_g3_i31 326bp	Bomo_Chr12	CUGBP_Elav-like_family_member_4_isoform_X3_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000381 P regulation of alternative mRNA splicing, via spliceosome GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006397 P mRNA processing GO:0007283 P spermatogenesis GO:0008380 P RNA splicing GO:0030317 P flagellated sperm motility GO:0048026 P positive regulation of mRNA splicing, via spliceosome
737	O_BomoIG100664_complete:A_BomoIG_DN31541_c1_g3_i31 132bp	Bomo_Chr12
738	O_BomoIG100665_complete:A_BomoIG_DN31541_c1_g3_i32 284bp	Bomo_Chr12	CUGBP_Elav-like_family_member_4_isoform_X7_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000381 P regulation of alternative mRNA splicing, via spliceosome GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006397 P mRNA processing GO:0007283 P spermatogenesis GO:0008380 P RNA splicing GO:0030317 P flagellated sperm motility GO:0048026 P positive regulation of mRNA splicing, via spliceosome
739	O_BomoIG100666_complete:A_BomoIG_DN31541_c1_g3_i32 118bp	Bomo_Chr12
740	O_BomoIG100667_complete:A_BomoIG_DN31541_c1_g3_i33 401bp	Bomo_Chr12	CUGBP_Elav-like_family_member_4_isoform_X3_[Bombyx_mori]	GO:0000166 F nucleotide binding GO:0000381 P regulation of alternative mRNA splicing, via spliceosome GO:0003676 F nucleic acid binding GO:0003723 F RNA binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006397 P mRNA processing GO:0007283 P spermatogenesis GO:0008380 P RNA splicing GO:0030317 P flagellated sperm motility GO:0048026 P positive regulation of mRNA splicing, via spliceosome
741	O_BomoIG100668_complete:A_BomoIG_DN31541_c1_g3_i33 122bp	Bomo_Chr12
742	O_BomoIG100669_5prime_partial:A_BomoIG_DN13018_c0_g1_i1 124bp	Bomo_Chr23
743	O_BomoIG10066_complete:A_BomoIG_DN33756_c1_g4_i2 486bp	Bomo_Chr5	eukaryotic_translation_initiation_factor_3_subunit_E_[Bombyx_mori]	GO:0001731 P formation of translation preinitiation complex GO:0003743 F translation initiation factor activity GO:0005737 C cytoplasm GO:0005852 C eukaryotic translation initiation factor 3 complex GO:0006412 P translation GO:0006413 P translational initiation GO:0006446 P regulation of translational initiation GO:0016282 C eukaryotic 43S preinitiation complex GO:0033290 C eukaryotic 48S preinitiation complex
744	O_BomoIG100670_3prime_partial:A_BomoIG_DN13010_c0_g1_i1 105bp	Bomo_Chr21	uncharacterized_protein_LOC101745971_[Bombyx_mori]
745	O_BomoIG100671_internal:A_BomoIG_DN13038_c0_g1_i1 175bp	Bomo_Chr23	uncharacterized_protein_LOC101740799_[Bombyx_mori]
746	O_BomoIG100672_internal:A_BomoIG_DN13346_c0_g1_i1 139bp	Bomo_Chr15	SWI5-dependent_HO_expression_protein_3-like_[Helicoverpa_armigera]
747	O_BomoIG100673_internal:A_BomoIG_DN63177_c0_g1_i1 184bp	Bomo_Chr8	EF-hand_domain-containing_family_member_C2_[Bombyx_mori]	GO:0005575 C cellular_component GO:0008150 P biological_process
748	O_BomoIG100674_5prime_partial:A_BomoIG_DN63101_c0_g1_i1 231bp	Bomo_Chr18	uncharacterized_protein_LOC101738309_[Bombyx_mori]
749	O_BomoIG100675_3prime_partial:A_BomoIG_DN63122_c0_g1_i1 135bp	Bomo_Chr12	pheromone_biosynthesis_activating_neuropeptide_receptor_isoform_As_[Bombyx_mori]	GO:0001607 F neuromedin U receptor activity GO:0004871 F obsolete signal transducer activity GO:0004930 F G protein-coupled receptor activity GO:0005622 C intracellular anatomical structure GO:0005886 C plasma membrane GO:0005887 C integral component of plasma membrane GO:0006816 P calcium ion transport GO:0006821 P chloride transport GO:0007165 P signal transduction GO:0007186 P G protein-coupled receptor signaling pathway GO:0007200 P phospholipase C-activating G protein-coupled receptor signaling pathway GO:0007202 P activation of phospholipase C activity GO:0007218 P neuropeptide signaling pathway GO:0008188 F neuropeptide receptor activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0019722 P calcium-mediated signaling GO:0048016 P inositol phosphate-mediated signaling GO:1903955 P positive regulation of protein targeting to mitochondrion
750	O_BomoIG100676_internal:A_BomoIG_DN63185_c0_g1_i1 119bp	Bomo_Chr4	tubulin_glycylase_3A_isoform_X1_[Bombyx_mori]