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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7051 O_BomoIG12584_complete:A_BomoIG_DN31389_c1_g3_i7
400bp
 eukaryotic_initiation_factor_4B_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0001731 P formation of translation preinitiation complex
GO:0002181 P cytoplasmic translation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005844 C polysome
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006446 P regulation of translational initiation
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0033592 F RNA strand annealing activity
GO:0034057 F RNA strand-exchange activity
GO:0043024 F ribosomal small subunit binding
GO:0044822 F RNA binding
GO:0097010 P eukaryotic translation initiation factor 4F complex assembly
7052 O_BomoIG12585_complete:A_BomoIG_DN31389_c1_g3_i7
153bp
7053 O_BomoIG12586_complete:A_BomoIG_DN31389_c1_g3_i7
101bp
7054 O_BomoIG12587_internal:A_BomoIG_DN31389_c1_g3_i8
102bp
7055 O_BomoIG12588_5prime_partial:A_BomoIG_DN31389_c1_g3_i9
104bp
7056 O_BomoIG12589_complete:A_BomoIG_DN31389_c2_g1_i1
246bp
 endoplasmic_reticulum_mannosyl-oligosaccharide_1,2-alpha-mannosidase_[Bombyx_mori]
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036508 P protein alpha-1,2-demannosylation
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1903561 C extracellular vesicle
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
7057 O_BomoIG1258_internal:A_BomoIG_DN30208_c1_g5_i3
101bp
 gustatory_receptor_for_sugar_taste_64a_[Bombyx_mori]
7058 O_BomoIG12590_complete:A_BomoIG_DN31389_c2_g1_i2
580bp
 endoplasmic_reticulum_mannosyl-oligosaccharide_1,2-alpha-mannosidase_[Bombyx_mori]
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036508 P protein alpha-1,2-demannosylation
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1903561 C extracellular vesicle
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
7059 O_BomoIG12591_complete:A_BomoIG_DN31389_c2_g1_i3
365bp
 endoplasmic_reticulum_mannosyl-oligosaccharide_1,2-alpha-mannosidase_[Bombyx_mori]
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036508 P protein alpha-1,2-demannosylation
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1903561 C extracellular vesicle
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
7060 O_BomoIG12592_complete:A_BomoIG_DN31389_c2_g1_i4
580bp
 endoplasmic_reticulum_mannosyl-oligosaccharide_1,2-alpha-mannosidase_[Bombyx_mori]
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036508 P protein alpha-1,2-demannosylation
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1903561 C extracellular vesicle
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
7061 O_BomoIG12593_complete:A_BomoIG_DN31389_c2_g1_i5
580bp
 endoplasmic_reticulum_mannosyl-oligosaccharide_1,2-alpha-mannosidase_[Bombyx_mori]
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036508 P protein alpha-1,2-demannosylation
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1903561 C extracellular vesicle
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
7062 O_BomoIG12594_complete:A_BomoIG_DN31389_c2_g1_i6
253bp
 endoplasmic_reticulum_mannosyl-oligosaccharide_1,2-alpha-mannosidase_[Bombyx_mori]
GO:0004571 F mannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509 F calcium ion binding
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0006491 P N-glycan processing
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0036508 P protein alpha-1,2-demannosylation
GO:0036509 P trimming of terminal mannose on B branch
GO:0044322 C endoplasmic reticulum quality control compartment
GO:0046872 F metal ion binding
GO:0097466 P ubiquitin-dependent glycoprotein ERAD pathway
GO:1903561 C extracellular vesicle
GO:1904380 P endoplasmic reticulum mannose trimming
GO:1904382 P mannose trimming involved in glycoprotein ERAD pathway
7063 O_BomoIG12595_complete:A_BomoIG_DN31392_c6_g3_i1
117bp
 uncharacterized_protein_LOC110380958,_partial_[Helicoverpa_armigera]
7064 O_BomoIG12596_complete:A_BomoIG_DN31392_c8_g1_i3
134bp
7065 O_BomoIG12597_complete:A_BomoIG_DN31392_c8_g1_i3
131bp
 uncharacterized_protein_LOC101740363_[Bombyx_mori]
7066 O_BomoIG12598_complete:A_BomoIG_DN31392_c8_g1_i5
101bp
7067 O_BomoIG12599_complete:A_BomoIG_DN31392_c8_g1_i6
140bp
7068 O_BomoIG1259_internal:A_BomoIG_DN30208_c1_g5_i3
101bp
 serine/arginine_repetitive_matrix_protein_1-like_[Bombyx_mori]
7069 O_BomoIG125_complete:A_BomoIG_DN30288_c4_g2_i6
791bp
 endothelin-converting_enzyme_homolog_isoform_X2_[Bombyx_mori]
GO:0004222 F metalloendopeptidase activity
GO:0005886 C plasma membrane
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008237 F metallopeptidase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
7070 O_BomoIG12600_complete:A_BomoIG_DN31392_c8_g1_i6
137bp
 uncharacterized_protein_LOC101740363_[Bombyx_mori]
7071 O_BomoIG12601_complete:A_BomoIG_DN31336_c0_g1_i5
523bp
 uncharacterized_protein_LOC101746767_[Bombyx_mori]
GO:0005929 C cilium
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030030 P cell projection organization
GO:0030111 P regulation of Wnt signaling pathway
GO:0035869 C ciliary transition zone
GO:0042384 P cilium assembly
GO:0042995 C cell projection
7072 O_BomoIG12602_complete:A_BomoIG_DN31394_c2_g1_i3
254bp
 hexokinase_type_2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001678 P cellular glucose homeostasis
GO:0004340 F glucokinase activity
GO:0004396 F hexokinase activity
GO:0005524 F ATP binding
GO:0005536 F glucose binding
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006000 P fructose metabolic process
GO:0006006 P glucose metabolic process
GO:0006013 P mannose metabolic process
GO:0006096 P glycolytic process
GO:0008865 F fructokinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019158 F mannokinase activity
GO:0019318 P hexose metabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0051156 P glucose 6-phosphate metabolic process
7073 O_BomoIG12603_complete:A_BomoIG_DN31394_c2_g1_i3
223bp
7074 O_BomoIG12604_complete:A_BomoIG_DN31394_c2_g1_i3
195bp
 hexokinase_type_2_isoform_X4_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001678 P cellular glucose homeostasis
GO:0004340 F glucokinase activity
GO:0004396 F hexokinase activity
GO:0005524 F ATP binding
GO:0005536 F glucose binding
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006000 P fructose metabolic process
GO:0006006 P glucose metabolic process
GO:0006013 P mannose metabolic process
GO:0006096 P glycolytic process
GO:0008865 F fructokinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019158 F mannokinase activity
GO:0019318 P hexose metabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0051156 P glucose 6-phosphate metabolic process
7075 O_BomoIG12605_complete:A_BomoIG_DN31394_c2_g1_i5
454bp
 hexokinase_type_2_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001678 P cellular glucose homeostasis
GO:0004340 F glucokinase activity
GO:0004396 F hexokinase activity
GO:0005524 F ATP binding
GO:0005536 F glucose binding
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006000 P fructose metabolic process
GO:0006006 P glucose metabolic process
GO:0006013 P mannose metabolic process
GO:0006096 P glycolytic process
GO:0008865 F fructokinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019158 F mannokinase activity
GO:0019318 P hexose metabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0051156 P glucose 6-phosphate metabolic process
7076 O_BomoIG12606_complete:A_BomoIG_DN31394_c2_g1_i5
251bp
 hypothetical_protein_FF38_08637_[Lucilia_cuprina]
7077 O_BomoIG12607_complete:A_BomoIG_DN31394_c2_g4_i1
615bp
 zinc_finger_protein_836_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
7078 O_BomoIG12608_complete:A_BomoIG_DN31394_c2_g4_i1
137bp
7079 O_BomoIG12609_complete:A_BomoIG_DN31394_c2_g1_i6
435bp
 hexokinase_type_2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001678 P cellular glucose homeostasis
GO:0004340 F glucokinase activity
GO:0004396 F hexokinase activity
GO:0005524 F ATP binding
GO:0005536 F glucose binding
GO:0005575 C cellular_component
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006000 P fructose metabolic process
GO:0006006 P glucose metabolic process
GO:0006013 P mannose metabolic process
GO:0006096 P glycolytic process
GO:0008865 F fructokinase activity
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0019158 F mannokinase activity
GO:0019318 P hexose metabolic process
GO:0046835 P carbohydrate phosphorylation
GO:0051156 P glucose 6-phosphate metabolic process
7080 O_BomoIG1260_complete:A_BomoIG_DN30208_c1_g6_i6
684bp
 acetylcholinesterase_type_1_isoform_X1_[Bombyx_mori]
GO:0003990 F acetylcholinesterase activity
GO:0004104 F cholinesterase activity
GO:0005615 C extracellular space
GO:0016787 F hydrolase activity
GO:0030054 C cell junction
GO:0042135 P neurotransmitter catabolic process
GO:0045202 C synapse
GO:0052689 F carboxylic ester hydrolase activity
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