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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
7021 O_BomoIG12557_complete:A_BomoIG_DN31389_c1_g3_i4
361bp
 eukaryotic_initiation_factor_4B_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0001731 P formation of translation preinitiation complex
GO:0002181 P cytoplasmic translation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005844 C polysome
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006446 P regulation of translational initiation
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0033592 F RNA strand annealing activity
GO:0034057 F RNA strand-exchange activity
GO:0043024 F ribosomal small subunit binding
GO:0044822 F RNA binding
GO:0097010 P eukaryotic translation initiation factor 4F complex assembly
7022 O_BomoIG12558_complete:A_BomoIG_DN31389_c1_g3_i4
153bp
7023 O_BomoIG12559_3prime_partial:A_BomoIG_DN31389_c1_g3_i4
101bp
7024 O_BomoIG1255_5prime_partial:A_BomoIG_DN30208_c1_g7_i2
213bp
 LOW_QUALITY_PROTEIN:_Golgi_apparatus_protein_1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005794 C Golgi apparatus
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017134 F fibroblast growth factor binding
7025 O_BomoIG12560_5prime_partial:A_BomoIG_DN31389_c1_g2_i8
911bp
 nucleolar_protein_4_isoform_X3_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008150 P biological_process
7026 O_BomoIG12561_complete:A_BomoIG_DN31389_c1_g2_i8
194bp
7027 O_BomoIG12562_complete:A_BomoIG_DN31389_c1_g2_i8
137bp
7028 O_BomoIG12563_complete:A_BomoIG_DN31389_c1_g2_i8
115bp
7029 O_BomoIG12564_complete:A_BomoIG_DN31389_c1_g1_i2
466bp
 chaperonin_subunit_6a_zeta_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005832 C chaperonin-containing T-complex
GO:0006457 P protein folding
GO:0051082 F unfolded protein binding
GO:1901998 P toxin transport
7030 O_BomoIG12565_complete:A_BomoIG_DN31389_c1_g1_i2
107bp
7031 O_BomoIG12566_5prime_partial:A_BomoIG_DN31389_c1_g2_i9
905bp
 uncharacterized_protein_LOC101736030_isoform_X4_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
7032 O_BomoIG12567_complete:A_BomoIG_DN31389_c1_g2_i9
194bp
7033 O_BomoIG12568_complete:A_BomoIG_DN31389_c1_g2_i9
156bp
7034 O_BomoIG12569_complete:A_BomoIG_DN31389_c1_g2_i9
115bp
7035 O_BomoIG1256_complete:A_BomoIG_DN30208_c1_g6_i5
684bp
 acetylcholinesterase_type_1_isoform_X1_[Bombyx_mori]
GO:0003990 F acetylcholinesterase activity
GO:0004104 F cholinesterase activity
GO:0005615 C extracellular space
GO:0016787 F hydrolase activity
GO:0030054 C cell junction
GO:0042135 P neurotransmitter catabolic process
GO:0045202 C synapse
GO:0052689 F carboxylic ester hydrolase activity
7036 O_BomoIG12570_complete:A_BomoIG_DN31389_c1_g2_i11
509bp
 uncharacterized_protein_LOC101736030_isoform_X4_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
7037 O_BomoIG12571_complete:A_BomoIG_DN31389_c1_g2_i11
156bp
7038 O_BomoIG12572_complete:A_BomoIG_DN31389_c1_g5_i2
924bp
 protein_unc-45_homolog_B_[Bombyx_mori]
GO:0002088 P lens development in camera-type eye
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0007275 P multicellular organism development
GO:0007517 P muscle organ development
GO:0007519 P skeletal muscle tissue development
GO:0030018 C Z disc
GO:0030154 P cell differentiation
GO:0030239 P myofibril assembly
GO:0031672 C A band
GO:0048471 C perinuclear region of cytoplasm
GO:0048738 P cardiac muscle tissue development
GO:0048747 P muscle cell development
GO:0060538 P skeletal muscle organ development
7039 O_BomoIG12573_complete:A_BomoIG_DN31389_c1_g2_i13
965bp
 uncharacterized_protein_LOC101736030_isoform_X4_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0008150 P biological_process
7040 O_BomoIG12574_complete:A_BomoIG_DN31389_c1_g2_i13
194bp
7041 O_BomoIG12575_complete:A_BomoIG_DN31389_c1_g2_i13
137bp
7042 O_BomoIG12576_complete:A_BomoIG_DN31389_c1_g2_i13
115bp
7043 O_BomoIG12577_3prime_partial:A_BomoIG_DN31389_c1_g3_i6
208bp
 eukaryotic_initiation_factor_4B_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000289 P nuclear-transcribed mRNA poly(A) tail shortening
GO:0001731 P formation of translation preinitiation complex
GO:0002181 P cytoplasmic translation
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003743 F translation initiation factor activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005844 C polysome
GO:0006412 P translation
GO:0006413 P translational initiation
GO:0006446 P regulation of translational initiation
GO:0016281 C eukaryotic translation initiation factor 4F complex
GO:0033592 F RNA strand annealing activity
GO:0034057 F RNA strand-exchange activity
GO:0043024 F ribosomal small subunit binding
GO:0044822 F RNA binding
GO:0097010 P eukaryotic translation initiation factor 4F complex assembly
7044 O_BomoIG12578_complete:A_BomoIG_DN31389_c1_g3_i6
137bp
7045 O_BomoIG12579_5prime_partial:A_BomoIG_DN31389_c1_g3_i6
129bp
7046 O_BomoIG1257_complete:A_BomoIG_DN30208_c1_g6_i5
106bp
 hypothetical_protein_ALC56_07702,_partial_[Trachymyrmex_septentrionalis]
7047 O_BomoIG12580_complete:A_BomoIG_DN31389_c1_g2_i16
1009bp
 nucleolar_protein_4_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
7048 O_BomoIG12581_complete:A_BomoIG_DN31389_c1_g2_i16
194bp
7049 O_BomoIG12582_complete:A_BomoIG_DN31389_c1_g2_i16
156bp
7050 O_BomoIG12583_complete:A_BomoIG_DN31389_c1_g2_i16
115bp
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