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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6661 O_BomoIG12232_complete:A_BomoIG_DN31352_c0_g1_i27
682bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6662 O_BomoIG12233_complete:A_BomoIG_DN31352_c0_g1_i27
141bp
6663 O_BomoIG12234_complete:A_BomoIG_DN31352_c0_g1_i27
109bp
6664 O_BomoIG12235_complete:A_BomoIG_DN31352_c0_g1_i28
682bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6665 O_BomoIG12236_complete:A_BomoIG_DN31352_c0_g1_i28
141bp
6666 O_BomoIG12237_complete:A_BomoIG_DN31352_c0_g1_i28
109bp
6667 O_BomoIG12238_complete:A_BomoIG_DN31352_c0_g1_i29
254bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6668 O_BomoIG12239_complete:A_BomoIG_DN31352_c0_g1_i29
133bp
6669 O_BomoIG1223_5prime_partial:A_BomoIG_DN30293_c3_g2_i8
195bp
 hypothetical_protein_CI238_07286_[Colletotrichum_incanum]
6670 O_BomoIG12240_complete:A_BomoIG_DN31352_c0_g1_i30
424bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6671 O_BomoIG12241_complete:A_BomoIG_DN31352_c0_g1_i30
226bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6672 O_BomoIG12242_complete:A_BomoIG_DN31352_c0_g1_i30
166bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
6673 O_BomoIG12243_complete:A_BomoIG_DN31352_c0_g1_i30
141bp
6674 O_BomoIG12244_complete:A_BomoIG_DN31352_c0_g1_i30
109bp
6675 O_BomoIG12245_complete:A_BomoIG_DN31352_c0_g1_i31
310bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6676 O_BomoIG12246_5prime_partial:A_BomoIG_DN31352_c0_g1_i31
146bp
6677 O_BomoIG12247_complete:A_BomoIG_DN31352_c0_g1_i32
573bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031047 P gene silencing by RNA
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6678 O_BomoIG12248_complete:A_BomoIG_DN31352_c0_g1_i32
141bp
6679 O_BomoIG12249_complete:A_BomoIG_DN31352_c0_g1_i33
682bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6680 O_BomoIG1224_3prime_partial:A_BomoIG_DN30293_c3_g2_i8
194bp
 cytosolic_Fe-S_cluster_assembly_factor_nubp1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
6681 O_BomoIG12250_complete:A_BomoIG_DN31352_c0_g1_i33
141bp
6682 O_BomoIG12251_complete:A_BomoIG_DN31352_c0_g1_i33
109bp
6683 O_BomoIG12252_complete:A_BomoIG_DN31352_c0_g1_i34
576bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6684 O_BomoIG12253_complete:A_BomoIG_DN31352_c0_g1_i34
226bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6685 O_BomoIG12254_complete:A_BomoIG_DN31352_c0_g1_i34
141bp
6686 O_BomoIG12255_complete:A_BomoIG_DN31352_c0_g1_i34
109bp
6687 O_BomoIG12256_complete:A_BomoIG_DN31352_c0_g1_i35
478bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6688 O_BomoIG12257_complete:A_BomoIG_DN31352_c0_g1_i35
141bp
6689 O_BomoIG12258_3prime_partial:A_BomoIG_DN31352_c0_g1_i36
181bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031047 P gene silencing by RNA
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6690 O_BomoIG12259_complete:A_BomoIG_DN31352_c0_g1_i37
226bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
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