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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6601 O_BomoIG12179_complete:A_BomoIG_DN31352_c0_g1_i7
109bp
6602 O_BomoIG1217_3prime_partial:A_BomoIG_DN30293_c3_g2_i3
123bp
 cytosolic_Fe-S_cluster_assembly_factor_nubp1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005814 C centriole
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0006879 P cellular iron ion homeostasis
GO:0010826 P negative regulation of centrosome duplication
GO:0016049 P cell growth
GO:0016226 P iron-sulfur cluster assembly
GO:0030030 P cell projection organization
GO:0042995 C cell projection
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
GO:0051642 P centrosome localization
GO:0070062 C extracellular exosome
GO:0072697 P protein localization to cell cortex
6603 O_BomoIG12180_complete:A_BomoIG_DN31352_c0_g1_i8
481bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6604 O_BomoIG12181_complete:A_BomoIG_DN31352_c0_g1_i8
226bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6605 O_BomoIG12182_complete:A_BomoIG_DN31352_c0_g1_i8
141bp
6606 O_BomoIG12183_complete:A_BomoIG_DN31352_c0_g1_i8
109bp
6607 O_BomoIG12184_complete:A_BomoIG_DN31352_c0_g1_i9
424bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6608 O_BomoIG12185_complete:A_BomoIG_DN31352_c0_g1_i9
226bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6609 O_BomoIG12186_complete:A_BomoIG_DN31352_c0_g1_i9
166bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
6610 O_BomoIG12187_complete:A_BomoIG_DN31352_c0_g1_i9
141bp
6611 O_BomoIG12188_complete:A_BomoIG_DN31352_c0_g1_i9
109bp
6612 O_BomoIG12189_complete:A_BomoIG_DN31352_c0_g1_i10
215bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6613 O_BomoIG1218_5prime_partial:A_BomoIG_DN30293_c3_g2_i3
108bp
 hypothetical_protein_CH063_03160_[Colletotrichum_higginsianum]
6614 O_BomoIG12190_5prime_partial:A_BomoIG_DN31352_c0_g1_i10
146bp
6615 O_BomoIG12191_complete:A_BomoIG_DN31352_c0_g1_i11
573bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031047 P gene silencing by RNA
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6616 O_BomoIG12192_complete:A_BomoIG_DN31352_c0_g1_i11
141bp
6617 O_BomoIG12193_complete:A_BomoIG_DN31352_c0_g1_i12
363bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6618 O_BomoIG12194_complete:A_BomoIG_DN31352_c0_g1_i12
133bp
6619 O_BomoIG12195_complete:A_BomoIG_DN31352_c0_g1_i12
109bp
6620 O_BomoIG12196_complete:A_BomoIG_DN31352_c0_g1_i13
102bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
6621 O_BomoIG12197_complete:A_BomoIG_DN31352_c0_g1_i14
329bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6622 O_BomoIG12198_complete:A_BomoIG_DN31352_c0_g1_i14
226bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6623 O_BomoIG12199_complete:A_BomoIG_DN31352_c0_g1_i14
166bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
6624 O_BomoIG1219_complete:A_BomoIG_DN30293_c3_g2_i4
124bp
 cytosolic_Fe-S_cluster_assembly_factor_nubp1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
6625 O_BomoIG121_complete:A_BomoIG_DN30288_c4_g1_i4
114bp
6626 O_BomoIG12200_complete:A_BomoIG_DN31352_c0_g1_i14
141bp
6627 O_BomoIG12201_complete:A_BomoIG_DN31352_c0_g1_i14
109bp
6628 O_BomoIG12202_complete:A_BomoIG_DN31352_c0_g1_i15
102bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
6629 O_BomoIG12203_complete:A_BomoIG_DN31352_c0_g1_i16
194bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031047 P gene silencing by RNA
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6630 O_BomoIG12204_complete:A_BomoIG_DN31352_c0_g1_i17
194bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031047 P gene silencing by RNA
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
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