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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6571 O_BomoIG12151_complete:A_BomoIG_DN31387_c0_g10_i1
109bp
6572 O_BomoIG12152_complete:A_BomoIG_DN31387_c0_g5_i2
149bp
 scavenger_receptor_class_B_member_3_[Bombyx_mori]
GO:0002433 P immune response-regulating cell surface receptor signaling pathway involved in phagocytosis
GO:0005044 F scavenger receptor activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006898 P receptor-mediated endocytosis
GO:0006909 P phagocytosis
GO:0006911 P phagocytosis, engulfment
GO:0006915 P apoptotic process
GO:0006952 P defense response
GO:0006955 P immune response
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035071 P salivary gland cell autophagic cell death
GO:0042116 P macrophage activation
GO:0048102 P autophagic cell death
GO:0050764 P regulation of phagocytosis
GO:0060099 P regulation of phagocytosis, engulfment
GO:0090382 P phagosome maturation
6573 O_BomoIG12153_complete:A_BomoIG_DN31387_c0_g11_i1
1760bp
 putative_ATP-dependent_RNA_helicase_TDRD12_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030154 P cell differentiation
GO:0031047 P gene silencing by RNA
GO:0031965 C nuclear membrane
GO:0043186 C P granule
GO:0051321 P meiotic cell cycle
GO:1990923 C PET complex
6574 O_BomoIG12154_complete:A_BomoIG_DN31387_c0_g11_i1
150bp
6575 O_BomoIG12155_complete:A_BomoIG_DN31387_c0_g11_i1
129bp
6576 O_BomoIG12156_complete:A_BomoIG_DN31387_c0_g11_i1
128bp
6577 O_BomoIG12157_complete:A_BomoIG_DN31387_c0_g11_i1
117bp
6578 O_BomoIG12158_complete:A_BomoIG_DN31387_c0_g11_i1
115bp
6579 O_BomoIG12159_complete:A_BomoIG_DN31387_c0_g5_i3
114bp
 scavenger_receptor_class_B_member_3_[Bombyx_mori]
6580 O_BomoIG1215_complete:A_BomoIG_DN30293_c3_g2_i2
157bp
 cytosolic_Fe-S_cluster_assembly_factor_nubp1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0016226 P iron-sulfur cluster assembly
GO:0046872 F metal ion binding
GO:0051536 F iron-sulfur cluster binding
GO:0051539 F 4 iron, 4 sulfur cluster binding
6581 O_BomoIG12160_complete:A_BomoIG_DN31387_c0_g4_i2
315bp
 proline_dehydrogenase_1,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004657 F proline dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006537 P glutamate biosynthetic process
GO:0006560 P proline metabolic process
GO:0006562 P proline catabolic process
GO:0007626 P locomotory behavior
GO:0010133 P proline catabolic process to glutamate
GO:0016491 F oxidoreductase activity
GO:0042331 P phototaxis
GO:0055114 P obsolete oxidation-reduction process
GO:0071949 F FAD binding
6582 O_BomoIG12161_complete:A_BomoIG_DN31387_c0_g6_i4
549bp
 nicalin_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0009966 P regulation of signal transduction
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0031648 P protein destabilization
GO:0043254 P regulation of protein-containing complex assembly
6583 O_BomoIG12162_5prime_partial:A_BomoIG_DN31387_c0_g4_i3
325bp
 proline_dehydrogenase_1,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004657 F proline dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006537 P glutamate biosynthetic process
GO:0006560 P proline metabolic process
GO:0006562 P proline catabolic process
GO:0007626 P locomotory behavior
GO:0010133 P proline catabolic process to glutamate
GO:0016491 F oxidoreductase activity
GO:0042331 P phototaxis
GO:0055114 P obsolete oxidation-reduction process
GO:0071949 F FAD binding
6584 O_BomoIG12163_complete:A_BomoIG_DN31387_c0_g4_i3
315bp
 proline_dehydrogenase_1,_mitochondrial_isoform_X1_[Bombyx_mori]
GO:0004657 F proline dehydrogenase activity
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006537 P glutamate biosynthetic process
GO:0006560 P proline metabolic process
GO:0006562 P proline catabolic process
GO:0007626 P locomotory behavior
GO:0010133 P proline catabolic process to glutamate
GO:0016491 F oxidoreductase activity
GO:0042331 P phototaxis
GO:0055114 P obsolete oxidation-reduction process
GO:0071949 F FAD binding
6585 O_BomoIG12164_complete:A_BomoIG_DN31352_c0_g1_i1
310bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6586 O_BomoIG12165_5prime_partial:A_BomoIG_DN31352_c0_g1_i1
146bp
6587 O_BomoIG12166_complete:A_BomoIG_DN31352_c0_g1_i2
102bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
6588 O_BomoIG12167_complete:A_BomoIG_DN31352_c0_g1_i3
573bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031047 P gene silencing by RNA
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6589 O_BomoIG12168_complete:A_BomoIG_DN31352_c0_g1_i3
141bp
6590 O_BomoIG12169_complete:A_BomoIG_DN31352_c0_g1_i4
424bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6591 O_BomoIG1216_5prime_partial:A_BomoIG_DN30293_c3_g2_i3
135bp
 hypothetical_protein_G7K_5086-t1_[Saitoella_complicata_NRRL_Y-17804]
6592 O_BomoIG12170_complete:A_BomoIG_DN31352_c0_g1_i4
226bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6593 O_BomoIG12171_complete:A_BomoIG_DN31352_c0_g1_i4
166bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
6594 O_BomoIG12172_complete:A_BomoIG_DN31352_c0_g1_i4
141bp
6595 O_BomoIG12173_complete:A_BomoIG_DN31352_c0_g1_i4
109bp
6596 O_BomoIG12174_complete:A_BomoIG_DN31352_c0_g1_i5
310bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6597 O_BomoIG12175_5prime_partial:A_BomoIG_DN31352_c0_g1_i5
146bp
6598 O_BomoIG12176_complete:A_BomoIG_DN31352_c0_g1_i6
194bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031047 P gene silencing by RNA
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6599 O_BomoIG12177_complete:A_BomoIG_DN31352_c0_g1_i7
682bp
 microprocessor_complex_subunit_DGCR8_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0004525 F ribonuclease III activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0015630 C microtubule cytoskeleton
GO:0020037 F heme binding
GO:0031053 P primary miRNA processing
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0070877 C microprocessor complex
GO:0070878 F primary miRNA binding
GO:0072091 P regulation of stem cell proliferation
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
6600 O_BomoIG12178_complete:A_BomoIG_DN31352_c0_g1_i7
141bp
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