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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
6001 O_BomoIG11639_complete:A_BomoIG_DN31318_c1_g1_i19
218bp
 DNA-directed_RNA_polymerase_III_subunit_RPC7-like_[Bombyx_mori]
GO:0000790 C chromatin
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006359 P regulation of transcription by RNA polymerase III
GO:0006384 P transcription initiation from RNA polymerase III promoter
GO:0008283 P cell population proliferation
GO:0032728 P positive regulation of interferon-beta production
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0051607 P defense response to virus
6002 O_BomoIG1163_5prime_partial:A_BomoIG_DN30255_c2_g1_i15
137bp
6003 O_BomoIG11640_complete:A_BomoIG_DN31318_c1_g1_i20
310bp
 chondroitin_sulfate_synthase_2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0032580 C Golgi cisterna membrane
GO:0046872 F metal ion binding
GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
6004 O_BomoIG11641_3prime_partial:A_BomoIG_DN31318_c1_g1_i21
353bp
 chondroitin_sulfate_synthase_2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0032580 C Golgi cisterna membrane
GO:0046872 F metal ion binding
GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
6005 O_BomoIG11642_complete:A_BomoIG_DN31318_c1_g1_i21
146bp
6006 O_BomoIG11643_5prime_partial:A_BomoIG_DN31318_c1_g1_i21
114bp
6007 O_BomoIG11644_complete:A_BomoIG_DN31318_c1_g1_i22
218bp
 DNA-directed_RNA_polymerase_III_subunit_RPC7-like_[Bombyx_mori]
GO:0000790 C chromatin
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006359 P regulation of transcription by RNA polymerase III
GO:0006384 P transcription initiation from RNA polymerase III promoter
GO:0008283 P cell population proliferation
GO:0032728 P positive regulation of interferon-beta production
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0051607 P defense response to virus
6008 O_BomoIG11645_complete:A_BomoIG_DN31318_c1_g1_i22
134bp
 sperm-associated_antigen_6_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007288 P sperm axoneme assembly
GO:0015630 C microtubule cytoskeleton
GO:0021591 P ventricular system development
GO:0030030 P cell projection organization
GO:0030317 P flagellated sperm motility
GO:0031514 C motile cilium
GO:0042995 C cell projection
GO:0097228 C sperm principal piece
GO:1990716 C axonemal central apparatus
6009 O_BomoIG11646_3prime_partial:A_BomoIG_DN31318_c1_g1_i23
672bp
 chondroitin_sulfate_synthase_2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0032580 C Golgi cisterna membrane
GO:0046872 F metal ion binding
GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
6010 O_BomoIG11647_complete:A_BomoIG_DN31318_c1_g1_i23
146bp
6011 O_BomoIG11648_3prime_partial:A_BomoIG_DN31318_c1_g1_i25
374bp
 chondroitin_sulfate_synthase_2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0032580 C Golgi cisterna membrane
GO:0046872 F metal ion binding
GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
6012 O_BomoIG11649_5prime_partial:A_BomoIG_DN31318_c1_g1_i25
316bp
6013 O_BomoIG1164_complete:A_BomoIG_DN30255_c2_g1_i15
130bp
6014 O_BomoIG11650_complete:A_BomoIG_DN31318_c1_g1_i25
146bp
6015 O_BomoIG11651_5prime_partial:A_BomoIG_DN31318_c1_g1_i25
114bp
6016 O_BomoIG11652_complete:A_BomoIG_DN31318_c1_g1_i30
218bp
 DNA-directed_RNA_polymerase_III_subunit_RPC7-like_[Bombyx_mori]
GO:0000790 C chromatin
GO:0001056 F RNA polymerase III activity
GO:0002376 P immune system process
GO:0005634 C nucleus
GO:0005666 C RNA polymerase III complex
GO:0006351 P transcription, DNA-templated
GO:0006359 P regulation of transcription by RNA polymerase III
GO:0006384 P transcription initiation from RNA polymerase III promoter
GO:0008283 P cell population proliferation
GO:0032728 P positive regulation of interferon-beta production
GO:0045087 P innate immune response
GO:0045089 P positive regulation of innate immune response
GO:0051607 P defense response to virus
6017 O_BomoIG11653_complete:A_BomoIG_DN31318_c1_g1_i30
134bp
 sperm-associated_antigen_6_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007288 P sperm axoneme assembly
GO:0015630 C microtubule cytoskeleton
GO:0021591 P ventricular system development
GO:0030030 P cell projection organization
GO:0030317 P flagellated sperm motility
GO:0031514 C motile cilium
GO:0042995 C cell projection
GO:0097228 C sperm principal piece
GO:1990716 C axonemal central apparatus
6018 O_BomoIG11654_5prime_partial:A_BomoIG_DN31318_c1_g1_i32
316bp
6019 O_BomoIG11655_3prime_partial:A_BomoIG_DN31318_c1_g1_i32
252bp
 chondroitin_sulfate_synthase_2_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0008376 F acetylgalactosaminyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0030206 P chondroitin sulfate biosynthetic process
GO:0032580 C Golgi cisterna membrane
GO:0046872 F metal ion binding
GO:0047238 F glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity
GO:0050510 F N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity
6020 O_BomoIG11656_complete:A_BomoIG_DN31318_c1_g1_i32
146bp
6021 O_BomoIG11657_complete:A_BomoIG_DN31328_c0_g2_i1
107bp
 PREDICTED:_uncharacterized_protein_LOC105389351_[Plutella_xylostella]
6022 O_BomoIG11658_3prime_partial:A_BomoIG_DN31328_c0_g2_i1
101bp
 PREDICTED:_uncharacterized_protein_LOC106132592,_partial_[Amyelois_transitella]
6023 O_BomoIG11659_3prime_partial:A_BomoIG_DN31328_c0_g1_i3
119bp
6024 O_BomoIG1165_5prime_partial:A_BomoIG_DN30255_c2_g1_i15
128bp
6025 O_BomoIG11660_5prime_partial:A_BomoIG_DN31328_c0_g1_i5
104bp
 uncharacterized_protein_LOC105841762_[Bombyx_mori]
6026 O_BomoIG11661_5prime_partial:A_BomoIG_DN31328_c0_g3_i1
106bp
6027 O_BomoIG11662_complete:A_BomoIG_DN31328_c0_g2_i2
107bp
 PREDICTED:_uncharacterized_protein_LOC105389351_[Plutella_xylostella]
6028 O_BomoIG11663_3prime_partial:A_BomoIG_DN31328_c0_g2_i2
101bp
 PREDICTED:_uncharacterized_protein_LOC106132592,_partial_[Amyelois_transitella]
6029 O_BomoIG11664_complete:A_BomoIG_DN31390_c4_g1_i1
848bp
 F-box_only_protein_11_isoform_X2_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0007605 P sensory perception of sound
GO:0008270 F zinc ion binding
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016567 P protein ubiquitination
GO:0035246 P peptidyl-arginine N-methylation
GO:0046872 F metal ion binding
6030 O_BomoIG11665_complete:A_BomoIG_DN31390_c4_g3_i1
157bp
 bombyxin_G-1-like_isoform_X3_[Bombyx_mori]
GO:0005179 F hormone activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0008083 F growth factor activity
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