SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/104180
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5281 O_BomoIG10991_complete:A_BomoIG_DN31381_c3_g5_i2
106bp
5282 O_BomoIG10992_complete:A_BomoIG_DN31347_c4_g2_i2
488bp
 long-chain-fatty-acid--CoA_ligase_5_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:2001236 P regulation of extrinsic apoptotic signaling pathway
5283 O_BomoIG10993_complete:A_BomoIG_DN31347_c4_g2_i2
115bp
5284 O_BomoIG10994_complete:A_BomoIG_DN31347_c4_g2_i3
660bp
 long-chain-fatty-acid--CoA_ligase_5_isoform_X3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0035338 P long-chain fatty-acyl-CoA biosynthetic process
GO:2001236 P regulation of extrinsic apoptotic signaling pathway
5285 O_BomoIG10995_complete:A_BomoIG_DN31347_c4_g2_i4
202bp
 long-chain-fatty-acid--CoA_ligase_5_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0003987 F acetate-CoA ligase activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006641 P triglyceride metabolic process
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0008610 P lipid biosynthetic process
GO:0010033 P response to organic substance
GO:0014070 P response to organic cyclic compound
GO:0015908 P fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0031090 C organelle membrane
GO:0033211 P adiponectin-activated signaling pathway
GO:0034201 P response to oleic acid
GO:0042178 P xenobiotic catabolic process
GO:0042493 P response to xenobiotic stimulus
GO:0043231 C intracellular membrane-bounded organelle
GO:0044539 P long-chain fatty acid import into cell
GO:0071902 P positive regulation of protein serine/threonine kinase activity
5286 O_BomoIG10996_complete:A_BomoIG_DN31347_c4_g2_i5
452bp
 long-chain-fatty-acid--CoA_ligase_5_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:2001236 P regulation of extrinsic apoptotic signaling pathway
5287 O_BomoIG10997_complete:A_BomoIG_DN31347_c4_g2_i5
115bp
5288 O_BomoIG10998_complete:A_BomoIG_DN31347_c4_g2_i7
648bp
 long-chain-fatty-acid--CoA_ligase_5_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:2001236 P regulation of extrinsic apoptotic signaling pathway
5289 O_BomoIG10999_complete:A_BomoIG_DN31347_c4_g2_i7
115bp
5290 O_BomoIG1099_3prime_partial:A_BomoIG_DN30255_c2_g3_i5
315bp
 uncharacterized_zinc_finger_protein_CG2678_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
5291 O_BomoIG109_3prime_partial:A_BomoIG_DN30288_c4_g4_i1
606bp
 protein_crumbs_[Bombyx_mori]
GO:0001738 P morphogenesis of a polarized epithelium
GO:0001745 P compound eye morphogenesis
GO:0002009 P morphogenesis of an epithelium
GO:0005080 F protein kinase C binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0005918 C septate junction
GO:0007043 P cell-cell junction assembly
GO:0007163 P establishment or maintenance of cell polarity
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007424 P open tracheal system development
GO:0007431 P salivary gland development
GO:0007435 P salivary gland morphogenesis
GO:0007443 P Malpighian tubule morphogenesis
GO:0008104 P protein localization
GO:0008284 P positive regulation of cell population proliferation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016028 C rhabdomere
GO:0016324 C apical plasma membrane
GO:0016327 C apicolateral plasma membrane
GO:0016332 P establishment or maintenance of polarity of embryonic epithelium
GO:0016334 P establishment or maintenance of polarity of follicular epithelium
GO:0030154 P cell differentiation
GO:0030507 F spectrin binding
GO:0032435 P negative regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032880 P regulation of protein localization
GO:0033157 P regulation of intracellular protein transport
GO:0034332 P adherens junction organization
GO:0035002 P liquid clearance, open tracheal system
GO:0035003 C subapical complex
GO:0035088 P establishment or maintenance of apical/basal cell polarity
GO:0035090 P maintenance of apical/basal cell polarity
GO:0035239 P tube morphogenesis
GO:0035330 P regulation of hippo signaling
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0042327 P positive regulation of phosphorylation
GO:0045186 P zonula adherens assembly
GO:0045197 P establishment or maintenance of epithelial cell apical/basal polarity
GO:0045198 P establishment of epithelial cell apical/basal polarity
GO:0045218 P zonula adherens maintenance
GO:0045494 P photoreceptor cell maintenance
GO:0045570 P regulation of imaginal disc growth
GO:0045746 P negative regulation of Notch signaling pathway
GO:0046621 P negative regulation of organ growth
GO:0046664 P dorsal closure, amnioserosa morphology change
GO:0048477 P oogenesis
GO:0050821 P protein stabilization
GO:0051642 P centrosome localization
GO:0061024 P membrane organization
GO:0061336 P cell morphogenesis involved in Malpighian tubule morphogenesis
GO:0061541 P rhabdomere morphogenesis
GO:0098813 P nuclear chromosome segregation
5292 O_BomoIG10_5prime_partial:A_BomoIG_DN30257_c0_g2_i2
295bp
 PREDICTED:_zinc_finger_BED_domain-containing_protein_4-like_[Anoplophora_glabripennis]
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0046983 F protein dimerization activity
5293 O_BomoIG11000_complete:A_BomoIG_DN31347_c4_g2_i8
689bp
 long-chain-fatty-acid--CoA_ligase_5_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005886 C plasma membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006641 P triglyceride metabolic process
GO:0007584 P response to nutrient
GO:0008152 P metabolic process
GO:0008610 P lipid biosynthetic process
GO:0010033 P response to organic substance
GO:0014070 P response to organic cyclic compound
GO:0015908 P fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0031090 C organelle membrane
GO:0033211 P adiponectin-activated signaling pathway
GO:0034201 P response to oleic acid
GO:0042178 P xenobiotic catabolic process
GO:0042493 P response to xenobiotic stimulus
GO:0043231 C intracellular membrane-bounded organelle
GO:0044539 P long-chain fatty acid import into cell
GO:0071902 P positive regulation of protein serine/threonine kinase activity
5294 O_BomoIG11001_complete:A_BomoIG_DN31347_c4_g2_i8
115bp
5295 O_BomoIG11002_5prime_partial:A_BomoIG_DN31347_c7_g1_i1
100bp
5296 O_BomoIG11003_5prime_partial:A_BomoIG_DN31321_c3_g2_i1
489bp
 V-type_proton_ATPase_116_kDa_subunit_a_[Bombyx_mori]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0042470 C melanosome
5297 O_BomoIG11004_complete:A_BomoIG_DN31321_c3_g2_i1
225bp
5298 O_BomoIG11005_complete:A_BomoIG_DN31321_c3_g2_i2
542bp
 V-type_proton_ATPase_116_kDa_subunit_a_[Bombyx_mori]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007035 P vacuolar acidification
GO:0015078 F proton transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016241 P regulation of macroautophagy
GO:0016471 C vacuolar proton-transporting V-type ATPase complex
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0042470 C melanosome
GO:0043231 C intracellular membrane-bounded organelle
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
GO:0051117 F ATPase binding
GO:0070062 C extracellular exosome
GO:0070072 P vacuolar proton-transporting V-type ATPase complex assembly
GO:1901998 P toxin transport
5299 O_BomoIG11006_complete:A_BomoIG_DN31321_c3_g2_i2
376bp
5300 O_BomoIG11007_5prime_partial:A_BomoIG_DN31321_c3_g5_i1
400bp
 chymotrypsin_inhibitor_CI-8A,_partial_[Bombyx_mori]
GO:0004867 F serine-type endopeptidase inhibitor activity
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0010466 P negative regulation of peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0030414 F peptidase inhibitor activity
5301 O_BomoIG11008_complete:A_BomoIG_DN31321_c3_g2_i3
838bp
 V-type_proton_ATPase_116_kDa_subunit_a_[Bombyx_mori]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0042470 C melanosome
5302 O_BomoIG11009_complete:A_BomoIG_DN31321_c3_g2_i3
376bp
5303 O_BomoIG1100_5prime_partial:A_BomoIG_DN30255_c2_g3_i5
178bp
5304 O_BomoIG11010_complete:A_BomoIG_DN31321_c3_g2_i4
169bp
 V-type_proton_ATPase_116_kDa_subunit_a_[Bombyx_mori]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0001666 P response to hypoxia
GO:0002119 P nematode larval development
GO:0006810 P transport
GO:0006811 P ion transport
GO:0007035 P vacuolar acidification
GO:0007271 P synaptic transmission, cholinergic
GO:0009792 P embryo development ending in birth or egg hatching
GO:0015078 F proton transmembrane transporter activity
GO:0015986 P ATP synthesis coupled proton transport
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016471 C vacuolar proton-transporting V-type ATPase complex
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0040011 P locomotion
GO:0040013 P negative regulation of locomotion
GO:0043068 P positive regulation of programmed cell death
GO:0046961 F proton-transporting ATPase activity, rotational mechanism
GO:0051117 F ATPase binding
GO:0070072 P vacuolar proton-transporting V-type ATPase complex assembly
5305 O_BomoIG11011_complete:A_BomoIG_DN31321_c3_g2_i5
692bp
 V-type_proton_ATPase_116_kDa_subunit_a_[Bombyx_mori]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0042470 C melanosome
5306 O_BomoIG11012_complete:A_BomoIG_DN31321_c3_g2_i5
376bp
5307 O_BomoIG11013_complete:A_BomoIG_DN31321_c3_g2_i5
110bp
 PREDICTED:_V-type_proton_ATPase_116_kDa_subunit_a_isoform_1-like_[Papilio_polytes]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0042470 C melanosome
5308 O_BomoIG11014_complete:A_BomoIG_DN31321_c3_g2_i6
838bp
 V-type_proton_ATPase_116_kDa_subunit_a_[Bombyx_mori]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0042470 C melanosome
5309 O_BomoIG11015_complete:A_BomoIG_DN31321_c3_g2_i6
376bp
5310 O_BomoIG11016_5prime_partial:A_BomoIG_DN31321_c3_g2_i7
762bp
 V-type_proton_ATPase_116_kDa_subunit_a_[Bombyx_mori]
GO:0000220 C vacuolar proton-transporting V-type ATPase, V0 domain
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015078 F proton transmembrane transporter activity
GO:0015991 P proton transmembrane transport
GO:0015992 P proton transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0033179 C proton-transporting V-type ATPase, V0 domain
GO:0042470 C melanosome
previous next from show/104180

- SilkBase 1999-2023 -