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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
5221 O_BomoIG10937_3prime_partial:A_BomoIG_DN24999_c0_g1_i1
121bp
 spidroin-1_[Bombyx_mori]
5222 O_BomoIG10938_internal:A_BomoIG_DN24977_c0_g1_i1
116bp
 Endonuclease-reverse_transcriptase_[Operophtera_brumata]
5223 O_BomoIG10939_3prime_partial:A_BomoIG_DN24907_c0_g1_i1
140bp
 LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC110379655_[Helicoverpa_armigera]
5224 O_BomoIG1093_5prime_partial:A_BomoIG_DN30255_c2_g5_i5
141bp
 zinc_finger_protein_236-like_isoform_X1_[Bombyx_mori]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007464 P R3/R4 cell fate commitment
GO:0007526 P larval somatic muscle development
GO:0008406 P gonad development
GO:0010906 P regulation of glucose metabolic process
GO:0016199 P axon midline choice point recognition
GO:0019730 P antimicrobial humoral response
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0031987 P locomotion involved in locomotory behavior
GO:0035167 P larval lymph gland hemopoiesis
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045467 P R7 cell development
GO:0045476 P nurse cell apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
5225 O_BomoIG10940_internal:A_BomoIG_DN24975_c0_g2_i1
177bp
 PREDICTED:_uncharacterized_protein_LOC106712391_isoform_X2_[Papilio_machaon]
5226 O_BomoIG10941_3prime_partial:A_BomoIG_DN24900_c0_g1_i1
157bp
 zinc_finger_MYM-type_protein_5-like_[Bombyx_mori]
5227 O_BomoIG10942_internal:A_BomoIG_DN24997_c0_g2_i1
129bp
 probable_3',5'-cyclic_phosphodiesterase_pde-5_isoform_X2_[Bombyx_mori]
GO:0004114 F 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0006935 P chemotaxis
GO:0007165 P signal transduction
GO:0007602 P phototransduction
GO:0007635 P chemosensory behavior
GO:0008081 F phosphoric diester hydrolase activity
GO:0008152 P metabolic process
GO:0008340 P determination of adult lifespan
GO:0010446 P response to alkaline pH
GO:0010628 P positive regulation of gene expression
GO:0016787 F hydrolase activity
GO:0030827 P obsolete negative regulation of cGMP biosynthetic process
GO:0042542 P response to hydrogen peroxide
GO:0046872 F metal ion binding
5228 O_BomoIG10943_internal:A_BomoIG_DN24997_c0_g3_i1
122bp
 probable_3',5'-cyclic_phosphodiesterase_pde-5_isoform_X1_[Bombyx_mori]
GO:0004114 F 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0006935 P chemotaxis
GO:0007165 P signal transduction
GO:0007602 P phototransduction
GO:0007635 P chemosensory behavior
GO:0008081 F phosphoric diester hydrolase activity
GO:0008152 P metabolic process
GO:0008340 P determination of adult lifespan
GO:0010446 P response to alkaline pH
GO:0010628 P positive regulation of gene expression
GO:0016787 F hydrolase activity
GO:0030827 P obsolete negative regulation of cGMP biosynthetic process
GO:0042542 P response to hydrogen peroxide
GO:0046872 F metal ion binding
5229 O_BomoIG10944_internal:A_BomoIG_DN24932_c0_g1_i1
204bp
 uncharacterized_protein_LOC101744570_[Bombyx_mori]
5230 O_BomoIG10945_internal:A_BomoIG_DN24932_c0_g2_i1
162bp
 uncharacterized_protein_LOC101744570_[Bombyx_mori]
GO:0003416 P endochondral bone growth
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0043586 P tongue development
GO:0046872 F metal ion binding
GO:0060021 P roof of mouth development
GO:0060485 P mesenchyme development
5231 O_BomoIG10946_5prime_partial:A_BomoIG_DN24931_c0_g1_i1
114bp
5232 O_BomoIG10947_complete:A_BomoIG_DN24920_c0_g1_i1
305bp
 probable_RNA_polymerase_II_nuclear_localization_protein_SLC7A6OS_[Bombyx_mori]
GO:0002244 P hematopoietic progenitor cell differentiation
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006810 P transport
GO:0015031 P protein transport
5233 O_BomoIG10948_complete:A_BomoIG_DN24920_c0_g1_i2
106bp
 probable_RNA_polymerase_II_nuclear_localization_protein_SLC7A6OS_[Bombyx_mori]
5234 O_BomoIG10949_complete:A_BomoIG_DN31334_c5_g2_i1
514bp
 5-methylcytosine_rRNA_methyltransferase_NSUN4_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0016428 F tRNA (cytosine-5-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0019843 F rRNA binding
GO:0030488 P tRNA methylation
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0070131 P positive regulation of mitochondrial translation
GO:0070181 F small ribosomal subunit rRNA binding
5235 O_BomoIG1094_complete:A_BomoIG_DN30255_c2_g3_i4
187bp
5236 O_BomoIG10950_complete:A_BomoIG_DN31334_c5_g2_i1
162bp
5237 O_BomoIG10951_complete:A_BomoIG_DN31334_c5_g2_i2
338bp
 5-methylcytosine_rRNA_methyltransferase_NSUN4_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005739 C mitochondrion
GO:0005762 C mitochondrial large ribosomal subunit
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0016428 F tRNA (cytosine-5-)-methyltransferase activity
GO:0016740 F transferase activity
GO:0019843 F rRNA binding
GO:0030488 P tRNA methylation
GO:0031167 P rRNA methylation
GO:0032259 P methylation
GO:0042254 P ribosome biogenesis
GO:0042256 P mature ribosome assembly
GO:0070131 P positive regulation of mitochondrial translation
GO:0070181 F small ribosomal subunit rRNA binding
5238 O_BomoIG10952_5prime_partial:A_BomoIG_DN31334_c5_g3_i1
101bp
5239 O_BomoIG10953_complete:A_BomoIG_DN31334_c5_g2_i3
141bp
5240 O_BomoIG10954_complete:A_BomoIG_DN31334_c5_g2_i4
162bp
5241 O_BomoIG10955_complete:A_BomoIG_DN31334_c5_g2_i4
147bp
 5-methylcytosine_rRNA_methyltransferase_NSUN4_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0005739 C mitochondrion
GO:0006364 P rRNA processing
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
5242 O_BomoIG10956_3prime_partial:A_BomoIG_DN31334_c5_g6_i1
297bp
 WSCD_family_member_AAEL009094_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5243 O_BomoIG10957_5prime_partial:A_BomoIG_DN31334_c5_g6_i1
154bp
5244 O_BomoIG10958_3prime_partial:A_BomoIG_DN31334_c5_g6_i1
146bp
5245 O_BomoIG10959_3prime_partial:A_BomoIG_DN31334_c5_g8_i1
140bp
5246 O_BomoIG1095_3prime_partial:A_BomoIG_DN30255_c2_g3_i4
116bp
5247 O_BomoIG10960_3prime_partial:A_BomoIG_DN31334_c5_g6_i2
268bp
 WSCD_family_member_AAEL009094_isoform_X2_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5248 O_BomoIG10961_5prime_partial:A_BomoIG_DN31334_c5_g6_i2
135bp
5249 O_BomoIG10962_complete:A_BomoIG_DN31334_c5_g6_i3
167bp
 WSCD_family_member_AAEL009094_isoform_X1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
5250 O_BomoIG10963_3prime_partial:A_BomoIG_DN31334_c5_g6_i3
161bp
 WSCD_family_member_AAEL009094_isoform_X1_[Bombyx_mori]
GO:0016020 C membrane
GO:0016021 C integral component of membrane
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