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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
511 O_BomoIG100460_5prime_partial:A_BomoIG_DN31589_c4_g5_i4
147bp
512 O_BomoIG100461_complete:A_BomoIG_DN31573_c2_g1_i1
123bp
513 O_BomoIG100462_5prime_partial:A_BomoIG_DN31573_c2_g1_i1
103bp
514 O_BomoIG100463_complete:A_BomoIG_DN31573_c3_g1_i6
100bp
515 O_BomoIG100464_complete:A_BomoIG_DN31573_c3_g1_i7
100bp
516 O_BomoIG100465_5prime_partial:A_BomoIG_DN31573_c3_g1_i8
132bp
517 O_BomoIG100466_5prime_partial:A_BomoIG_DN31507_c2_g1_i1
109bp
 phosphatidylinositol_3-kinase_60_[Bombyx_mori]
518 O_BomoIG100467_5prime_partial:A_BomoIG_DN31582_c2_g1_i1
102bp
519 O_BomoIG100468_complete:A_BomoIG_DN31582_c2_g1_i2
233bp
 sulfatase-modifying_factor_1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006687 P glycosphingolipid metabolic process
GO:0016491 F oxidoreductase activity
GO:0042803 F protein homodimerization activity
GO:0043687 P post-translational protein modification
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
520 O_BomoIG100469_5prime_partial:A_BomoIG_DN31582_c2_g4_i1
480bp
 uncharacterized_protein_LOC101736423_[Bombyx_mori]
521 O_BomoIG10046_5prime_partial:A_BomoIG_DN33734_c1_g8_i2
101bp
522 O_BomoIG100470_complete:A_BomoIG_DN31582_c2_g4_i2
1140bp
 uncharacterized_protein_LOC101736423_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001106 F transcription corepressor activity
GO:0001701 P in utero embryonic development
GO:0001824 P blastocyst development
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0017053 C transcription repressor complex
GO:0019899 F enzyme binding
GO:0070062 C extracellular exosome
GO:1902035 P positive regulation of hematopoietic stem cell proliferation
GO:1902037 P negative regulation of hematopoietic stem cell differentiation
523 O_BomoIG100471_complete:A_BomoIG_DN31582_c2_g2_i2
134bp
 uncharacterized_protein_LOC101736794_isoform_X1_[Bombyx_mori]
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0005634 C nucleus
GO:0006401 P RNA catabolic process
GO:0032299 C ribonuclease H2 complex
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
524 O_BomoIG100472_complete:A_BomoIG_DN31582_c2_g1_i3
180bp
 sulfatase-modifying_factor_1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006687 P glycosphingolipid metabolic process
GO:0016491 F oxidoreductase activity
GO:0042803 F protein homodimerization activity
GO:0043687 P post-translational protein modification
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
525 O_BomoIG100473_complete:A_BomoIG_DN31582_c2_g1_i3
114bp
 sulfatase-modifying_factor_1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0016491 F oxidoreductase activity
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
526 O_BomoIG100474_complete:A_BomoIG_DN31582_c2_g5_i1
697bp
 vacuolar_protein_sorting-associated_protein_41_homolog_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0008017 F microtubule binding
GO:0008270 F zinc ion binding
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030123 C AP-3 adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030897 C HOPS complex
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0033263 C CORVET complex
GO:0034058 P endosomal vesicle fusion
GO:0035542 P regulation of SNARE complex assembly
GO:0042144 P vacuole fusion, non-autophagic
GO:0042802 F identical protein binding
GO:0043621 F protein self-association
GO:0045055 P regulated exocytosis
GO:0046872 F metal ion binding
GO:0048193 P Golgi vesicle transport
GO:0051020 F GTPase binding
GO:0071439 C clathrin complex
GO:1902774 P late endosome to lysosome transport
527 O_BomoIG100475_complete:A_BomoIG_DN31582_c2_g5_i1
100bp
528 O_BomoIG100476_complete:A_BomoIG_DN31582_c2_g5_i2
662bp
 vacuolar_protein_sorting-associated_protein_41_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0008017 F microtubule binding
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030123 C AP-3 adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030897 C HOPS complex
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0033263 C CORVET complex
GO:0034058 P endosomal vesicle fusion
GO:0035542 P regulation of SNARE complex assembly
GO:0042144 P vacuole fusion, non-autophagic
GO:0042802 F identical protein binding
GO:0043621 F protein self-association
GO:0045055 P regulated exocytosis
GO:0046872 F metal ion binding
GO:0048193 P Golgi vesicle transport
GO:0051020 F GTPase binding
GO:0071439 C clathrin complex
GO:1902774 P late endosome to lysosome transport
529 O_BomoIG100477_complete:A_BomoIG_DN31582_c2_g5_i2
100bp
530 O_BomoIG100478_complete:A_BomoIG_DN31582_c2_g4_i4
1037bp
 uncharacterized_protein_LOC101736423_[Bombyx_mori]
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0001106 F transcription corepressor activity
GO:0001701 P in utero embryonic development
GO:0001824 P blastocyst development
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0017053 C transcription repressor complex
GO:0019899 F enzyme binding
GO:0070062 C extracellular exosome
GO:1902035 P positive regulation of hematopoietic stem cell proliferation
GO:1902037 P negative regulation of hematopoietic stem cell differentiation
531 O_BomoIG100479_complete:A_BomoIG_DN31582_c2_g8_i1
752bp
 serine/arginine_repetitive_matrix_protein_2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002039 F p53 binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007155 P cell adhesion
GO:0015630 C microtubule cytoskeleton
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030155 P regulation of cell adhesion
GO:0035507 P regulation of myosin-light-chain-phosphatase activity
GO:0035556 P intracellular signal transduction
GO:0042127 P regulation of cell population proliferation
GO:0046872 F metal ion binding
GO:1901796 P regulation of signal transduction by p53 class mediator
GO:2000772 P regulation of cellular senescence
532 O_BomoIG10047_internal:A_BomoIG_DN33734_c1_g3_i8
143bp
 Pol_protein_[Bombyx_mori]
533 O_BomoIG100480_complete:A_BomoIG_DN31582_c2_g8_i1
263bp
534 O_BomoIG100481_complete:A_BomoIG_DN31582_c2_g8_i1
141bp
535 O_BomoIG100482_complete:A_BomoIG_DN31582_c2_g4_i6
140bp
 uncharacterized_protein_LOC101736423_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004519 F endonuclease activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0008152 P metabolic process
GO:0016310 P phosphorylation
GO:0016787 F hydrolase activity
GO:0046404 F polydeoxyribonucleotide 5'-hydroxyl-kinase activity
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
536 O_BomoIG100483_5prime_partial:A_BomoIG_DN31582_c2_g5_i3
872bp
 vacuolar_protein_sorting-associated_protein_41_homolog_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005770 C late endosome
GO:0005794 C Golgi apparatus
GO:0005798 C Golgi-associated vesicle
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006914 P autophagy
GO:0008017 F microtubule binding
GO:0008150 P biological_process
GO:0008270 F zinc ion binding
GO:0008333 P endosome to lysosome transport
GO:0010008 C endosome membrane
GO:0015031 P protein transport
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0030123 C AP-3 adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030897 C HOPS complex
GO:0031410 C cytoplasmic vesicle
GO:0031902 C late endosome membrane
GO:0033263 C CORVET complex
GO:0034058 P endosomal vesicle fusion
GO:0035542 P regulation of SNARE complex assembly
GO:0042144 P vacuole fusion, non-autophagic
GO:0042802 F identical protein binding
GO:0043621 F protein self-association
GO:0045055 P regulated exocytosis
GO:0046872 F metal ion binding
GO:0048193 P Golgi vesicle transport
GO:0051020 F GTPase binding
GO:0071439 C clathrin complex
GO:1902774 P late endosome to lysosome transport
537 O_BomoIG100484_complete:A_BomoIG_DN31582_c2_g5_i3
100bp
538 O_BomoIG100485_3prime_partial:A_BomoIG_DN31582_c2_g8_i2
773bp
 serine/arginine_repetitive_matrix_protein_2_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002039 F p53 binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007155 P cell adhesion
GO:0015630 C microtubule cytoskeleton
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030155 P regulation of cell adhesion
GO:0035507 P regulation of myosin-light-chain-phosphatase activity
GO:0035556 P intracellular signal transduction
GO:0042127 P regulation of cell population proliferation
GO:0046872 F metal ion binding
GO:1901796 P regulation of signal transduction by p53 class mediator
GO:2000772 P regulation of cellular senescence
539 O_BomoIG100486_complete:A_BomoIG_DN31582_c2_g8_i2
263bp
540 O_BomoIG100487_5prime_partial:A_BomoIG_DN31582_c2_g8_i2
168bp
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