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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
481 O_BomoIG100433_internal:A_BomoIG_DN31568_c2_g2_i6
436bp
 uncharacterized_protein_LOC101740379_isoform_X2_[Bombyx_mori]
482 O_BomoIG100434_5prime_partial:A_BomoIG_DN31568_c2_g2_i7
926bp
 uncharacterized_protein_LOC101740379_isoform_X1_[Bombyx_mori]
483 O_BomoIG100435_5prime_partial:A_BomoIG_DN31568_c2_g2_i8
926bp
 uncharacterized_protein_LOC101740379_isoform_X1_[Bombyx_mori]
484 O_BomoIG100436_5prime_partial:A_BomoIG_DN31568_c2_g2_i9
468bp
 uncharacterized_protein_LOC101740379_isoform_X2_[Bombyx_mori]
485 O_BomoIG100437_5prime_partial:A_BomoIG_DN31568_c2_g3_i3
1262bp
 chaoptin_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007601 P visual perception
GO:0016020 C membrane
GO:0016028 C rhabdomere
GO:0032528 P microvillus organization
GO:0035996 C rhabdomere microvillus
GO:0042051 P compound eye photoreceptor development
GO:0042052 P rhabdomere development
GO:0046658 C anchored component of plasma membrane
GO:0050896 P response to stimulus
486 O_BomoIG100438_complete:A_BomoIG_DN31568_c2_g3_i3
212bp
487 O_BomoIG100439_3prime_partial:A_BomoIG_DN31568_c2_g3_i3
141bp
488 O_BomoIG10043_5prime_partial:A_BomoIG_DN33734_c1_g1_i1
119bp
489 O_BomoIG100440_complete:A_BomoIG_DN31568_c2_g3_i3
112bp
490 O_BomoIG100441_internal:A_BomoIG_DN31568_c2_g2_i10
495bp
 uncharacterized_protein_LOC101740379_isoform_X2_[Bombyx_mori]
491 O_BomoIG100442_complete:A_BomoIG_DN31589_c4_g1_i2
1220bp
 LOW_QUALITY_PROTEIN:_JNK-interacting_protein_3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005078 F MAP-kinase scaffold activity
GO:0005737 C cytoplasm
GO:0008088 P axo-dendritic transport
GO:0009967 P positive regulation of signal transduction
GO:0016192 P vesicle-mediated transport
GO:0019894 F kinesin binding
GO:0030140 C trans-Golgi network transport vesicle
GO:0043005 C neuron projection
GO:0046328 P regulation of JNK cascade
492 O_BomoIG100443_complete:A_BomoIG_DN31589_c4_g1_i3
472bp
 LOW_QUALITY_PROTEIN:_JNK-interacting_protein_3_[Bombyx_mori]
GO:0000187 P obsolete activation of MAPK activity
GO:0001669 C acrosomal vesicle
GO:0005078 F MAP-kinase scaffold activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0007257 P obsolete activation of JUN kinase activity
GO:0007283 P spermatogenesis
GO:0008432 F JUN kinase binding
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
GO:0030159 F signaling receptor complex adaptor activity
GO:0030335 P positive regulation of cell migration
GO:0031410 C cytoplasmic vesicle
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043410 P positive regulation of MAPK cascade
GO:0045666 P positive regulation of neuron differentiation
GO:0048273 F mitogen-activated protein kinase p38 binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051146 P striated muscle cell differentiation
GO:0051149 P positive regulation of muscle cell differentiation
GO:0051260 P protein homooligomerization
GO:0070062 C extracellular exosome
GO:0090074 P negative regulation of protein homodimerization activity
493 O_BomoIG100444_complete:A_BomoIG_DN31589_c4_g2_i1
205bp
 thioredoxin_family_Trp26_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006974 P cellular response to DNA damage stimulus
494 O_BomoIG100445_complete:A_BomoIG_DN31589_c4_g1_i4
540bp
 LOW_QUALITY_PROTEIN:_JNK-interacting_protein_3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005078 F MAP-kinase scaffold activity
GO:0005737 C cytoplasm
GO:0008088 P axo-dendritic transport
GO:0009967 P positive regulation of signal transduction
GO:0016192 P vesicle-mediated transport
GO:0019894 F kinesin binding
GO:0030140 C trans-Golgi network transport vesicle
GO:0043005 C neuron projection
GO:0046328 P regulation of JNK cascade
495 O_BomoIG100446_complete:A_BomoIG_DN31589_c4_g2_i2
136bp
 PITH_domain-containing_protein_CG6153-like_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0006974 P cellular response to DNA damage stimulus
496 O_BomoIG100447_complete:A_BomoIG_DN31589_c4_g2_i3
101bp
 PITH_domain-containing_protein_CG6153-like_[Bombyx_mori]
GO:0005634 C nucleus
497 O_BomoIG100448_complete:A_BomoIG_DN31589_c4_g1_i6
124bp
498 O_BomoIG100449_5prime_partial:A_BomoIG_DN31589_c4_g5_i1
486bp
 structural_maintenance_of_chromosomes_protein_6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000803 C sex chromosome
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016605 C PML body
GO:0016607 C nuclear speck
GO:0016925 P protein sumoylation
GO:0030915 C Smc5-Smc6 complex
GO:0031625 F ubiquitin protein ligase binding
GO:0035061 C interchromatin granule
GO:0035861 C site of double-strand break
GO:0051984 P positive regulation of chromosome segregation
GO:0090398 P cellular senescence
499 O_BomoIG10044_internal:A_BomoIG_DN33734_c1_g3_i3
113bp
 Pol_protein_[Bombyx_mori]
500 O_BomoIG100450_5prime_partial:A_BomoIG_DN31589_c4_g5_i1
147bp
501 O_BomoIG100451_complete:A_BomoIG_DN31589_c4_g5_i1
118bp
502 O_BomoIG100452_complete:A_BomoIG_DN31589_c4_g1_i9
546bp
 LOW_QUALITY_PROTEIN:_JNK-interacting_protein_3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005078 F MAP-kinase scaffold activity
GO:0005737 C cytoplasm
GO:0008088 P axo-dendritic transport
GO:0009967 P positive regulation of signal transduction
GO:0016192 P vesicle-mediated transport
GO:0019894 F kinesin binding
GO:0030140 C trans-Golgi network transport vesicle
GO:0043005 C neuron projection
GO:0046328 P regulation of JNK cascade
503 O_BomoIG100453_complete:A_BomoIG_DN31589_c4_g1_i10
696bp
 LOW_QUALITY_PROTEIN:_JNK-interacting_protein_3_[Bombyx_mori]
GO:0000187 P obsolete activation of MAPK activity
GO:0001669 C acrosomal vesicle
GO:0005078 F MAP-kinase scaffold activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0007257 P obsolete activation of JUN kinase activity
GO:0007283 P spermatogenesis
GO:0008432 F JUN kinase binding
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
GO:0030159 F signaling receptor complex adaptor activity
GO:0030335 P positive regulation of cell migration
GO:0031410 C cytoplasmic vesicle
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043410 P positive regulation of MAPK cascade
GO:0045666 P positive regulation of neuron differentiation
GO:0048273 F mitogen-activated protein kinase p38 binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051146 P striated muscle cell differentiation
GO:0051149 P positive regulation of muscle cell differentiation
GO:0051260 P protein homooligomerization
GO:0070062 C extracellular exosome
GO:0090074 P negative regulation of protein homodimerization activity
504 O_BomoIG100454_complete:A_BomoIG_DN31589_c4_g1_i11
607bp
 LOW_QUALITY_PROTEIN:_JNK-interacting_protein_3_[Bombyx_mori]
GO:0000187 P obsolete activation of MAPK activity
GO:0001669 C acrosomal vesicle
GO:0005078 F MAP-kinase scaffold activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0007257 P obsolete activation of JUN kinase activity
GO:0007283 P spermatogenesis
GO:0008432 F JUN kinase binding
GO:0016021 C integral component of membrane
GO:0019894 F kinesin binding
GO:0030159 F signaling receptor complex adaptor activity
GO:0030335 P positive regulation of cell migration
GO:0031410 C cytoplasmic vesicle
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043410 P positive regulation of MAPK cascade
GO:0045666 P positive regulation of neuron differentiation
GO:0048273 F mitogen-activated protein kinase p38 binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051146 P striated muscle cell differentiation
GO:0051149 P positive regulation of muscle cell differentiation
GO:0051260 P protein homooligomerization
GO:0070062 C extracellular exosome
GO:0090074 P negative regulation of protein homodimerization activity
505 O_BomoIG100455_5prime_partial:A_BomoIG_DN31589_c4_g5_i3
349bp
 structural_maintenance_of_chromosomes_protein_6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000803 C sex chromosome
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016605 C PML body
GO:0016607 C nuclear speck
GO:0016925 P protein sumoylation
GO:0030915 C Smc5-Smc6 complex
GO:0031625 F ubiquitin protein ligase binding
GO:0035061 C interchromatin granule
GO:0035861 C site of double-strand break
GO:0051984 P positive regulation of chromosome segregation
GO:0090398 P cellular senescence
506 O_BomoIG100456_5prime_partial:A_BomoIG_DN31589_c4_g5_i3
147bp
507 O_BomoIG100457_complete:A_BomoIG_DN31589_c4_g1_i12
1214bp
 LOW_QUALITY_PROTEIN:_JNK-interacting_protein_3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005078 F MAP-kinase scaffold activity
GO:0005737 C cytoplasm
GO:0008088 P axo-dendritic transport
GO:0009967 P positive regulation of signal transduction
GO:0016192 P vesicle-mediated transport
GO:0019894 F kinesin binding
GO:0030140 C trans-Golgi network transport vesicle
GO:0043005 C neuron projection
GO:0046328 P regulation of JNK cascade
508 O_BomoIG100458_5prime_partial:A_BomoIG_DN31589_c4_g5_i4
447bp
 structural_maintenance_of_chromosomes_protein_6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000722 P telomere maintenance via recombination
GO:0000724 P double-strand break repair via homologous recombination
GO:0000781 C chromosome, telomeric region
GO:0000803 C sex chromosome
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0016605 C PML body
GO:0016607 C nuclear speck
GO:0016925 P protein sumoylation
GO:0030915 C Smc5-Smc6 complex
GO:0031625 F ubiquitin protein ligase binding
GO:0035061 C interchromatin granule
GO:0035861 C site of double-strand break
GO:0051984 P positive regulation of chromosome segregation
GO:0090398 P cellular senescence
509 O_BomoIG100459_5prime_partial:A_BomoIG_DN31589_c4_g5_i4
237bp
510 O_BomoIG10045_5prime_partial:A_BomoIG_DN33734_c1_g3_i6
147bp
 Pol_protein_[Bombyx_mori]
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