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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4771 O_BomoIG10531_3prime_partial:A_BomoIG_DN33766_c1_g1_i8
134bp
 PREDICTED:_uncharacterized_protein_LOC106709010_[Papilio_machaon]
4772 O_BomoIG10532_5prime_partial:A_BomoIG_DN33766_c1_g1_i8
119bp
4773 O_BomoIG10533_3prime_partial:A_BomoIG_DN33766_c1_g1_i11
513bp
 Retrovirus-related_Pol_polyprotein_LINE-1_[Zea_mays]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4774 O_BomoIG10534_5prime_partial:A_BomoIG_DN33766_c1_g1_i11
121bp
4775 O_BomoIG10535_complete:A_BomoIG_DN33766_c1_g1_i11
103bp
4776 O_BomoIG10536_3prime_partial:A_BomoIG_DN33766_c1_g1_i12
496bp
 Retrovirus-related_Pol_polyprotein_LINE-1_[Zea_mays]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4777 O_BomoIG10537_5prime_partial:A_BomoIG_DN33766_c1_g1_i12
121bp
4778 O_BomoIG10538_complete:A_BomoIG_DN33766_c1_g1_i12
103bp
4779 O_BomoIG10539_complete:A_BomoIG_DN33766_c1_g1_i13
419bp
 Retrovirus-related_Pol_polyprotein_LINE-1_[Zea_mays]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4780 O_BomoIG1053_5prime_partial:A_BomoIG_DN30275_c1_g9_i1
143bp
 PREDICTED:_max-binding_protein_MNT-like_[Papilio_machaon]
4781 O_BomoIG10540_complete:A_BomoIG_DN33766_c1_g1_i13
103bp
4782 O_BomoIG10541_3prime_partial:A_BomoIG_DN33766_c1_g1_i14
507bp
 Retrovirus-related_Pol_polyprotein_LINE-1_[Zea_mays]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4783 O_BomoIG10542_complete:A_BomoIG_DN33766_c1_g1_i14
103bp
4784 O_BomoIG10543_3prime_partial:A_BomoIG_DN33766_c1_g1_i15
172bp
 PREDICTED:_uncharacterized_protein_LOC106709010_[Papilio_machaon]
4785 O_BomoIG10544_complete:A_BomoIG_DN33766_c1_g1_i15
103bp
4786 O_BomoIG10545_internal:A_BomoIG_DN33766_c1_g2_i2
113bp
4787 O_BomoIG10546_internal:A_BomoIG_DN33766_c1_g2_i3
111bp
4788 O_BomoIG10547_3prime_partial:A_BomoIG_DN33766_c1_g1_i16
401bp
 Retrovirus-related_Pol_polyprotein_LINE-1_[Zea_mays]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4789 O_BomoIG10548_complete:A_BomoIG_DN33766_c1_g1_i16
103bp
4790 O_BomoIG10549_3prime_partial:A_BomoIG_DN33766_c1_g1_i17
432bp
 Retrovirus-related_Pol_polyprotein_LINE-1_[Zea_mays]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0046872 F metal ion binding
4791 O_BomoIG1054_complete:A_BomoIG_DN30275_c1_g12_i1
129bp
 putative_nuclease_HARBI1,_partial_[Pseudomyrmex_gracilis]
4792 O_BomoIG10550_5prime_partial:A_BomoIG_DN33766_c1_g1_i17
121bp
4793 O_BomoIG10551_complete:A_BomoIG_DN33766_c1_g1_i17
103bp
4794 O_BomoIG10552_5prime_partial:A_BomoIG_DN33766_c1_g1_i18
114bp
4795 O_BomoIG10553_internal:A_BomoIG_DN33766_c1_g1_i19
102bp
4796 O_BomoIG10554_internal:A_BomoIG_DN33766_c1_g1_i19
102bp
 RNA-directed_DNA_polymerase_;_HMG-I_and_HMG-Y,_DNA-binding,_putative_[Medicago_truncatula]
4797 O_BomoIG10555_3prime_partial:A_BomoIG_DN33766_c1_g1_i20
407bp
 Retrovirus-related_Pol_polyprotein_LINE-1_[Zea_mays]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
4798 O_BomoIG10556_5prime_partial:A_BomoIG_DN33766_c1_g1_i20
121bp
4799 O_BomoIG10557_complete:A_BomoIG_DN33766_c1_g1_i20
103bp
4800 O_BomoIG10558_3prime_partial:A_BomoIG_DN33766_c1_g1_i21
490bp
 Retrovirus-related_Pol_polyprotein_LINE-1_[Zea_mays]
GO:0003824 F catalytic activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
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