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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4261 O_BomoIG103836_5prime_partial:A_BomoIG_DN29890_c0_g2_i3
145bp
 E3_ubiquitin-protein_ligase_SH3RF1_isoform_X1_[Bombyx_mori]
4262 O_BomoIG103837_5prime_partial:A_BomoIG_DN29890_c0_g2_i4
194bp
 E3_ubiquitin-protein_ligase_SH3RF1_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0046872 F metal ion binding
4263 O_BomoIG103838_internal:A_BomoIG_DN29890_c0_g2_i6
176bp
 E3_ubiquitin-protein_ligase_SH3RF1_isoform_X1_[Bombyx_mori]
4264 O_BomoIG103839_complete:A_BomoIG_DN29886_c1_g1_i2
258bp
 methyltransferase-like_protein_16_homolog_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0052907 F 23S rRNA (adenine(1618)-N(6))-methyltransferase activity
GO:0070475 P rRNA base methylation
4265 O_BomoIG10383_3prime_partial:A_BomoIG_DN33710_c0_g3_i3
171bp
 uncharacterized_protein_LOC101737399_[Bombyx_mori]
4266 O_BomoIG103840_complete:A_BomoIG_DN29886_c1_g2_i1
225bp
 RNA-binding_protein_fusilli_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008380 P RNA splicing
GO:0043484 P regulation of RNA splicing
4267 O_BomoIG103841_5prime_partial:A_BomoIG_DN29886_c1_g2_i1
154bp
 PREDICTED:_RNA-binding_protein_fusilli_isoform_X1_[Amyelois_transitella]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008380 P RNA splicing
GO:0043484 P regulation of RNA splicing
4268 O_BomoIG103842_complete:A_BomoIG_DN29886_c1_g2_i1
108bp
4269 O_BomoIG103843_complete:A_BomoIG_DN29886_c1_g2_i1
107bp
4270 O_BomoIG103844_5prime_partial:A_BomoIG_DN29886_c1_g1_i5
231bp
 methyltransferase-like_protein_16_homolog_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
GO:0052907 F 23S rRNA (adenine(1618)-N(6))-methyltransferase activity
GO:0070475 P rRNA base methylation
4271 O_BomoIG103845_complete:A_BomoIG_DN29886_c1_g1_i5
199bp
 methyltransferase-like_protein_16_homolog_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0007098 P centrosome cycle
GO:0008168 F methyltransferase activity
GO:0009792 P embryo development ending in birth or egg hatching
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0040025 P vulval development
GO:0052907 F 23S rRNA (adenine(1618)-N(6))-methyltransferase activity
GO:0070475 P rRNA base methylation
4272 O_BomoIG103846_5prime_partial:A_BomoIG_DN29886_c1_g1_i6
161bp
 methyltransferase-like_protein_16_homolog_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
GO:0052907 F 23S rRNA (adenine(1618)-N(6))-methyltransferase activity
GO:0070475 P rRNA base methylation
4273 O_BomoIG103847_3prime_partial:A_BomoIG_DN29886_c1_g3_i1
273bp
 PREDICTED:_RNA-binding_protein_fusilli_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008380 P RNA splicing
GO:0043484 P regulation of RNA splicing
4274 O_BomoIG103848_3prime_partial:A_BomoIG_DN29886_c1_g4_i1
168bp
 dynein_heavy_chain_3,_axonemal_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0030286 C dynein complex
GO:0036156 C inner dynein arm
GO:0042995 C cell projection
4275 O_BomoIG103849_5prime_partial:A_BomoIG_DN29886_c1_g2_i2
370bp
 RNA-binding_protein_fusilli_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008380 P RNA splicing
GO:0043484 P regulation of RNA splicing
4276 O_BomoIG10384_5prime_partial:A_BomoIG_DN33710_c0_g3_i3
149bp
 hypothetical_protein_WN48_07866_[Eufriesea_mexicana]
4277 O_BomoIG103850_complete:A_BomoIG_DN29886_c1_g2_i2
107bp
4278 O_BomoIG103851_3prime_partial:A_BomoIG_DN29886_c1_g4_i2
126bp
 dynein_heavy_chain_3,_axonemal_[Bombyx_mori]
4279 O_BomoIG103852_3prime_partial:A_BomoIG_DN29886_c1_g4_i3
254bp
 dynein_heavy_chain_3,_axonemal_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003774 F cytoskeletal motor activity
GO:0003777 F microtubule motor activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0005929 C cilium
GO:0007018 P microtubule-based movement
GO:0008150 P biological_process
GO:0008152 P metabolic process
GO:0030286 C dynein complex
GO:0036156 C inner dynein arm
GO:0042995 C cell projection
4280 O_BomoIG103853_5prime_partial:A_BomoIG_DN29886_c1_g2_i3
249bp
 RNA-binding_protein_fusilli_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008380 P RNA splicing
GO:0043484 P regulation of RNA splicing
4281 O_BomoIG103854_3prime_partial:A_BomoIG_DN29886_c1_g3_i2
113bp
 PREDICTED:_RNA-binding_protein_fusilli_[Papilio_polytes]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008380 P RNA splicing
GO:0043484 P regulation of RNA splicing
4282 O_BomoIG103855_complete:A_BomoIG_DN29886_c1_g3_i3
213bp
 RNA-binding_protein_fusilli-like_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0006397 P mRNA processing
GO:0007173 P epidermal growth factor receptor signaling pathway
GO:0008380 P RNA splicing
GO:0043484 P regulation of RNA splicing
4283 O_BomoIG103856_5prime_partial:A_BomoIG_DN29886_c1_g1_i13
138bp
 methyltransferase-like_protein_16_homolog_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
GO:0052907 F 23S rRNA (adenine(1618)-N(6))-methyltransferase activity
GO:0070475 P rRNA base methylation
4284 O_BomoIG103857_5prime_partial:A_BomoIG_DN29886_c1_g1_i16
406bp
 methyltransferase-like_protein_16_homolog_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
GO:0052907 F 23S rRNA (adenine(1618)-N(6))-methyltransferase activity
GO:0070475 P rRNA base methylation
4285 O_BomoIG103858_3prime_partial:A_BomoIG_DN29823_c2_g1_i1
99bp
 transposase_[Ceratitis_rosa]
4286 O_BomoIG103859_complete:A_BomoIG_DN29802_c0_g1_i1
602bp
 uncharacterized_protein_LOC101737214_isoform_X4_[Bombyx_mori]
4287 O_BomoIG10385_complete:A_BomoIG_DN33710_c0_g3_i3
142bp
4288 O_BomoIG103860_complete:A_BomoIG_DN29802_c0_g1_i1
158bp
4289 O_BomoIG103861_complete:A_BomoIG_DN29802_c0_g1_i2
930bp
 uncharacterized_protein_LOC101737214_isoform_X4_[Bombyx_mori]
4290 O_BomoIG103862_complete:A_BomoIG_DN29802_c0_g1_i2
158bp
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