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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
361 O_BomoIG100325_complete:A_BomoIG_DN31572_c2_g3_i1
103bp
362 O_BomoIG100326_5prime_partial:A_BomoIG_DN31572_c2_g5_i1
162bp
363 O_BomoIG100327_complete:A_BomoIG_DN31572_c2_g5_i1
102bp
 protein_phosphatase_1_regulatory_subunit_14B_isoform_X3_[Bombyx_mori]
GO:0004864 F protein phosphatase inhibitor activity
GO:0004865 F protein serine/threonine phosphatase inhibitor activity
GO:0005737 C cytoplasm
GO:0008599 F protein phosphatase regulator activity
GO:0019212 F phosphatase inhibitor activity
GO:0035304 P regulation of protein dephosphorylation
GO:0042325 P regulation of phosphorylation
GO:0043086 P negative regulation of catalytic activity
GO:0045087 P innate immune response
GO:0050790 P regulation of catalytic activity
364 O_BomoIG100328_complete:A_BomoIG_DN31572_c2_g3_i3
690bp
 ATP-binding_cassette_sub-family_G_member_1-like_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005543 F phospholipid binding
GO:0005548 F phospholipid transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009720 P detection of hormone stimulus
GO:0009897 C external side of plasma membrane
GO:0010033 P response to organic substance
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010872 P regulation of cholesterol esterification
GO:0010875 P positive regulation of cholesterol efflux
GO:0010887 P negative regulation of cholesterol storage
GO:0010888 P negative regulation of lipid storage
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019534 F toxin transmembrane transporter activity
GO:0030301 P cholesterol transport
GO:0032367 P intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0033993 P response to lipid
GO:0034041 F ABC-type sterol transporter activity
GO:0034374 P low-density lipoprotein particle remodeling
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0042157 P lipoprotein metabolic process
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043691 P reverse cholesterol transport
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0055037 C recycling endosome
GO:0055085 P transmembrane transport
GO:0055091 P phospholipid homeostasis
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:1901998 P toxin transport
365 O_BomoIG100329_complete:A_BomoIG_DN31572_c2_g3_i3
103bp
366 O_BomoIG10032_3prime_partial:A_BomoIG_DN33729_c1_g1_i12
174bp
 protein_Skeletor,_isoforms_B/C_[Bombyx_mori]
GO:0005198 F structural molecule activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006997 P nucleus organization
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016363 C nuclear matrix
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
367 O_BomoIG100330_complete:A_BomoIG_DN31572_c2_g5_i3
166bp
 protein_phosphatase_1_regulatory_subunit_14B_isoform_X3_[Bombyx_mori]
GO:0004864 F protein phosphatase inhibitor activity
GO:0004865 F protein serine/threonine phosphatase inhibitor activity
GO:0005737 C cytoplasm
GO:0008599 F protein phosphatase regulator activity
GO:0019212 F phosphatase inhibitor activity
GO:0035304 P regulation of protein dephosphorylation
GO:0042325 P regulation of phosphorylation
GO:0043086 P negative regulation of catalytic activity
GO:0045087 P innate immune response
GO:0050790 P regulation of catalytic activity
368 O_BomoIG100331_5prime_partial:A_BomoIG_DN31572_c2_g5_i4
101bp
369 O_BomoIG100332_5prime_partial:A_BomoIG_DN31572_c2_g5_i5
157bp
370 O_BomoIG100333_complete:A_BomoIG_DN31572_c2_g5_i5
155bp
 protein_phosphatase_1_regulatory_subunit_14B_isoform_X3_[Bombyx_mori]
GO:0004864 F protein phosphatase inhibitor activity
GO:0004865 F protein serine/threonine phosphatase inhibitor activity
GO:0005737 C cytoplasm
GO:0008599 F protein phosphatase regulator activity
GO:0019212 F phosphatase inhibitor activity
GO:0035304 P regulation of protein dephosphorylation
GO:0042325 P regulation of phosphorylation
GO:0043086 P negative regulation of catalytic activity
GO:0045087 P innate immune response
GO:0050790 P regulation of catalytic activity
371 O_BomoIG100334_complete:A_BomoIG_DN31572_c2_g5_i6
145bp
 protein_phosphatase_1_regulatory_subunit_14B_isoform_X4_[Bombyx_mori]
GO:0004864 F protein phosphatase inhibitor activity
GO:0004865 F protein serine/threonine phosphatase inhibitor activity
GO:0005737 C cytoplasm
GO:0008599 F protein phosphatase regulator activity
GO:0019212 F phosphatase inhibitor activity
GO:0035304 P regulation of protein dephosphorylation
GO:0042325 P regulation of phosphorylation
GO:0043086 P negative regulation of catalytic activity
GO:0045087 P innate immune response
GO:0050790 P regulation of catalytic activity
372 O_BomoIG100335_complete:A_BomoIG_DN31572_c2_g5_i7
113bp
 protein_phosphatase_1_regulatory_subunit_14B_isoform_X3_[Bombyx_mori]
GO:0004864 F protein phosphatase inhibitor activity
GO:0004865 F protein serine/threonine phosphatase inhibitor activity
GO:0005737 C cytoplasm
GO:0008599 F protein phosphatase regulator activity
GO:0019212 F phosphatase inhibitor activity
GO:0035304 P regulation of protein dephosphorylation
GO:0042325 P regulation of phosphorylation
GO:0043086 P negative regulation of catalytic activity
GO:0045087 P innate immune response
GO:0050790 P regulation of catalytic activity
373 O_BomoIG100336_internal:A_BomoIG_DN31572_c2_g5_i8
154bp
374 O_BomoIG100337_5prime_partial:A_BomoIG_DN31572_c2_g5_i8
105bp
375 O_BomoIG100338_5prime_partial:A_BomoIG_DN31572_c2_g5_i9
157bp
376 O_BomoIG100339_complete:A_BomoIG_DN31572_c2_g5_i9
134bp
 protein_phosphatase_1_regulatory_subunit_14B_isoform_X4_[Bombyx_mori]
GO:0004864 F protein phosphatase inhibitor activity
GO:0004865 F protein serine/threonine phosphatase inhibitor activity
GO:0005737 C cytoplasm
GO:0008599 F protein phosphatase regulator activity
GO:0019212 F phosphatase inhibitor activity
GO:0035304 P regulation of protein dephosphorylation
GO:0042325 P regulation of phosphorylation
GO:0043086 P negative regulation of catalytic activity
GO:0045087 P innate immune response
GO:0050790 P regulation of catalytic activity
377 O_BomoIG10033_complete:A_BomoIG_DN33729_c1_g1_i12
165bp
378 O_BomoIG100340_complete:A_BomoIG_DN31572_c2_g3_i6
690bp
 ATP-binding_cassette_sub-family_G_member_1-like_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005543 F phospholipid binding
GO:0005548 F phospholipid transporter activity
GO:0005654 C nucleoplasm
GO:0005739 C mitochondrion
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006355 P regulation of transcription, DNA-templated
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008203 P cholesterol metabolic process
GO:0009720 P detection of hormone stimulus
GO:0009897 C external side of plasma membrane
GO:0010033 P response to organic substance
GO:0010745 P negative regulation of macrophage derived foam cell differentiation
GO:0010872 P regulation of cholesterol esterification
GO:0010875 P positive regulation of cholesterol efflux
GO:0010887 P negative regulation of cholesterol storage
GO:0010888 P negative regulation of lipid storage
GO:0015485 F cholesterol binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016887 F ATP hydrolysis activity
GO:0017127 F cholesterol transfer activity
GO:0019534 F toxin transmembrane transporter activity
GO:0030301 P cholesterol transport
GO:0032367 P intracellular cholesterol transport
GO:0033344 P cholesterol efflux
GO:0033700 P phospholipid efflux
GO:0033993 P response to lipid
GO:0034041 F ABC-type sterol transporter activity
GO:0034374 P low-density lipoprotein particle remodeling
GO:0034375 P high-density lipoprotein particle remodeling
GO:0034436 P glycoprotein transport
GO:0034437 F obsolete glycoprotein transmembrane transporter activity
GO:0042157 P lipoprotein metabolic process
GO:0042632 P cholesterol homeostasis
GO:0042803 F protein homodimerization activity
GO:0042987 P amyloid precursor protein catabolic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0043531 F ADP binding
GO:0043691 P reverse cholesterol transport
GO:0045542 P positive regulation of cholesterol biosynthetic process
GO:0046982 F protein heterodimerization activity
GO:0046983 F protein dimerization activity
GO:0055037 C recycling endosome
GO:0055085 P transmembrane transport
GO:0055091 P phospholipid homeostasis
GO:0055099 P cellular response to high density lipoprotein particle stimulus
GO:1901998 P toxin transport
379 O_BomoIG100341_complete:A_BomoIG_DN31572_c2_g3_i6
103bp
380 O_BomoIG100342_complete:A_BomoIG_DN31572_c2_g5_i12
113bp
 protein_phosphatase_1_regulatory_subunit_14B_isoform_X3_[Bombyx_mori]
GO:0004864 F protein phosphatase inhibitor activity
GO:0004865 F protein serine/threonine phosphatase inhibitor activity
GO:0005737 C cytoplasm
GO:0008599 F protein phosphatase regulator activity
GO:0019212 F phosphatase inhibitor activity
GO:0035304 P regulation of protein dephosphorylation
GO:0042325 P regulation of phosphorylation
GO:0043086 P negative regulation of catalytic activity
GO:0045087 P innate immune response
GO:0050790 P regulation of catalytic activity
381 O_BomoIG100343_3prime_partial:A_BomoIG_DN31576_c0_g1_i1
450bp
 proteasome_activator_complex_subunit_4_isoform_X2_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
382 O_BomoIG100344_complete:A_BomoIG_DN31576_c0_g1_i1
128bp
383 O_BomoIG100345_internal:A_BomoIG_DN31576_c0_g1_i2
303bp
 proteasome_activator_complex_subunit_4_isoform_X2_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007275 P multicellular organism development
GO:0007283 P spermatogenesis
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0030154 P cell differentiation
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
384 O_BomoIG100346_5prime_partial:A_BomoIG_DN31576_c0_g1_i2
156bp
385 O_BomoIG100347_complete:A_BomoIG_DN31576_c0_g1_i2
138bp
386 O_BomoIG100348_complete:A_BomoIG_DN31576_c0_g1_i3
1157bp
 proteasome_activator_complex_subunit_4_isoform_X2_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
387 O_BomoIG100349_5prime_partial:A_BomoIG_DN31576_c0_g1_i3
157bp
388 O_BomoIG10034_3prime_partial:A_BomoIG_DN33729_c1_g1_i14
321bp
 protein_Skeletor,_isoforms_B/C_[Bombyx_mori]
GO:0004500 F dopamine beta-monooxygenase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0005874 C microtubule
GO:0006584 P catecholamine metabolic process
GO:0006997 P nucleus organization
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016363 C nuclear matrix
GO:0051225 P spindle assembly
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0055114 P obsolete oxidation-reduction process
389 O_BomoIG100350_complete:A_BomoIG_DN31576_c0_g1_i3
131bp
390 O_BomoIG100351_complete:A_BomoIG_DN31576_c0_g1_i4
835bp
 proteasome_activator_complex_subunit_4_isoform_X2_[Bombyx_mori]
GO:0000502 C proteasome complex
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010499 P proteasomal ubiquitin-independent protein catabolic process
GO:0010952 P positive regulation of peptidase activity
GO:0016504 F peptidase activator activity
GO:0016607 C nuclear speck
GO:0035093 P spermatogenesis, exchange of chromosomal proteins
GO:0070577 F lysine-acetylated histone binding
GO:1990111 C spermatoproteasome complex
previous next from show/104180

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