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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3391 O_BomoIG103052_complete:A_BomoIG_DN29829_c6_g6_i2
111bp
3392 O_BomoIG103053_complete:A_BomoIG_DN29829_c6_g6_i2
100bp
 hypothetical_protein_N339_12791,_partial_[Pterocles_gutturalis]
3393 O_BomoIG103054_complete:A_BomoIG_DN29829_c6_g6_i3
255bp
 zinc_finger_protein_664-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3394 O_BomoIG103055_complete:A_BomoIG_DN29829_c6_g6_i3
111bp
3395 O_BomoIG103056_complete:A_BomoIG_DN29829_c6_g2_i10
510bp
 protein_FAM13A_isoform_X1_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3396 O_BomoIG103057_complete:A_BomoIG_DN29829_c6_g6_i4
191bp
 zinc_finger_protein_664-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
3397 O_BomoIG103058_complete:A_BomoIG_DN29829_c6_g6_i4
100bp
 hypothetical_protein_N339_12791,_partial_[Pterocles_gutturalis]
3398 O_BomoIG103059_complete:A_BomoIG_DN29829_c6_g2_i12
139bp
 protein_FAM13A_isoform_X2_[Helicoverpa_armigera]
3399 O_BomoIG10305_complete:A_BomoIG_DN33790_c2_g3_i1
171bp
3400 O_BomoIG103060_complete:A_BomoIG_DN29829_c6_g2_i13
510bp
 protein_FAM13A_isoform_X1_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3401 O_BomoIG103061_5prime_partial:A_BomoIG_DN29841_c0_g1_i1
376bp
 uncharacterized_protein_LOC110385666_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3402 O_BomoIG103062_complete:A_BomoIG_DN29841_c0_g1_i1
177bp
 uncharacterized_protein_LOC110386105_[Bombyx_mori]
3403 O_BomoIG103063_5prime_partial:A_BomoIG_DN29841_c0_g1_i2
182bp
 uncharacterized_protein_LOC110385666_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
3404 O_BomoIG103064_5prime_partial:A_BomoIG_DN29841_c0_g1_i2
114bp
3405 O_BomoIG103065_5prime_partial:A_BomoIG_DN29841_c0_g1_i3
376bp
 uncharacterized_protein_LOC110385666_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
3406 O_BomoIG103066_complete:A_BomoIG_DN29841_c0_g1_i3
171bp
 uncharacterized_protein_LOC110386105_[Bombyx_mori]
3407 O_BomoIG103067_internal:A_BomoIG_DN29841_c0_g1_i4
382bp
 retroelement_polyprotein_[Danaus_plexippus_plexippus]
GO:0000166 F nucleotide binding
GO:0000943 C retrotransposon nucleocapsid
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004523 F RNA-DNA hybrid ribonuclease activity
GO:0004540 F ribonuclease activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0019076 P viral release from host cell
GO:0032197 P transposition, RNA-mediated
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
GO:0090501 P RNA phosphodiester bond hydrolysis
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
3408 O_BomoIG103068_3prime_partial:A_BomoIG_DN29850_c2_g1_i1
368bp
 beta-1-syntrophin_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005198 F structural molecule activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005925 C focal adhesion
GO:0016020 C membrane
GO:0030054 C cell junction
GO:0030165 F PDZ domain binding
GO:0042383 C sarcolemma
GO:0043234 C protein-containing complex
GO:0045202 C synapse
3409 O_BomoIG103069_complete:A_BomoIG_DN29850_c2_g1_i1
142bp
3410 O_BomoIG10306_5prime_partial:A_BomoIG_DN33790_c2_g3_i1
169bp
3411 O_BomoIG103070_complete:A_BomoIG_DN29850_c2_g1_i1
139bp
 unnamed_protein_product_[Homo_sapiens]
3412 O_BomoIG103071_5prime_partial:A_BomoIG_DN29850_c4_g3_i1
221bp
 tyrosine-protein_phosphatase_69D_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004728 F obsolete signal transducer, downstream of receptor, with protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007414 P axonal defasciculation
GO:0007415 P defasciculation of motor neuron axon
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0023014 P signal transduction
GO:0030424 C axon
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0046331 P lateral inhibition
GO:0048813 P dendrite morphogenesis
GO:0097155 P fasciculation of sensory neuron axon
3413 O_BomoIG103072_3prime_partial:A_BomoIG_DN29850_c4_g3_i1
201bp
3414 O_BomoIG103073_5prime_partial:A_BomoIG_DN29850_c4_g3_i1
156bp
3415 O_BomoIG103074_internal:A_BomoIG_DN29850_c4_g3_i2
533bp
3416 O_BomoIG103075_internal:A_BomoIG_DN29850_c4_g3_i2
533bp
 tyrosine-protein_phosphatase_69D_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004728 F obsolete signal transducer, downstream of receptor, with protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007414 P axonal defasciculation
GO:0007415 P defasciculation of motor neuron axon
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0023014 P signal transduction
GO:0030424 C axon
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0046331 P lateral inhibition
GO:0048813 P dendrite morphogenesis
GO:0097155 P fasciculation of sensory neuron axon
3417 O_BomoIG103076_5prime_partial:A_BomoIG_DN29850_c4_g3_i2
164bp
3418 O_BomoIG103077_5prime_partial:A_BomoIG_DN29850_c4_g3_i2
103bp
3419 O_BomoIG103078_5prime_partial:A_BomoIG_DN29850_c4_g3_i4
164bp
 tyrosine-protein_phosphatase_69D_[Bombyx_mori]
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004728 F obsolete signal transducer, downstream of receptor, with protein tyrosine phosphatase activity
GO:0005001 F transmembrane receptor protein tyrosine phosphatase activity
GO:0005886 C plasma membrane
GO:0006470 P protein dephosphorylation
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007414 P axonal defasciculation
GO:0007415 P defasciculation of motor neuron axon
GO:0008045 P motor neuron axon guidance
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0023014 P signal transduction
GO:0030424 C axon
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0046331 P lateral inhibition
GO:0048813 P dendrite morphogenesis
GO:0097155 P fasciculation of sensory neuron axon
3420 O_BomoIG103079_5prime_partial:A_BomoIG_DN29850_c4_g3_i4
156bp
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