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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3361 O_BomoIG103025_complete:A_BomoIG_DN29895_c5_g1_i2
581bp
 X-ray_repair_cross-complementing_protein_6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000723 P telomere maintenance
GO:0000784 C chromosome, telomeric region
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003690 F double-stranded DNA binding
GO:0003824 F catalytic activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0006281 P DNA repair
GO:0006303 P double-strand break repair via nonhomologous end joining
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016829 F lyase activity
GO:0032508 P DNA duplex unwinding
GO:0042162 F telomeric DNA binding
GO:0043564 C Ku70:Ku80 complex
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0051575 F 5'-deoxyribose-5-phosphate lyase activity
GO:0070419 C nonhomologous end joining complex
GO:0071480 P cellular response to gamma radiation
GO:0071481 P cellular response to X-ray
3362 O_BomoIG103026_complete:A_BomoIG_DN29895_c5_g1_i2
125bp
 TM2_domain-containing_protein_almondex_[Bombyx_mori]
GO:0001713 P ectodermal cell fate determination
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0007219 P Notch signaling pathway
GO:0007220 P Notch receptor processing
GO:0007275 P multicellular organism development
GO:0007398 P ectoderm development
GO:0007498 P mesoderm development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0044214 C spanning component of plasma membrane
GO:0045747 P positive regulation of Notch signaling pathway
GO:0046331 P lateral inhibition
3363 O_BomoIG103027_complete:A_BomoIG_DN29895_c5_g1_i2
114bp
3364 O_BomoIG103028_3prime_partial:A_BomoIG_DN29895_c5_g3_i3
590bp
 protein_FAN_isoform_X1_[Bombyx_mori]
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006672 P ceramide metabolic process
GO:0007165 P signal transduction
GO:0012505 C endomembrane system
GO:0016230 F sphingomyelin phosphodiesterase activator activity
GO:0019898 C extrinsic component of membrane
GO:0043065 P positive regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
GO:2000304 P positive regulation of ceramide biosynthetic process
3365 O_BomoIG103029_complete:A_BomoIG_DN29895_c5_g3_i3
275bp
 protein_FAN_isoform_X2_[Bombyx_mori]
GO:0005123 F death receptor binding
GO:0005543 F phospholipid binding
GO:0012505 C endomembrane system
GO:0016230 F sphingomyelin phosphodiesterase activator activity
GO:0019898 C extrinsic component of membrane
GO:0043065 P positive regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
3366 O_BomoIG10302_complete:A_BomoIG_DN33786_c1_g2_i16
317bp
 uncharacterized_protein_LOC101738733_isoform_X1_[Bombyx_mori]
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
3367 O_BomoIG103030_complete:A_BomoIG_DN29895_c5_g3_i4
268bp
 protein_FAN_isoform_X1_[Bombyx_mori]
GO:0005123 F death receptor binding
GO:0005543 F phospholipid binding
GO:0012505 C endomembrane system
GO:0016230 F sphingomyelin phosphodiesterase activator activity
GO:0019898 C extrinsic component of membrane
GO:0043065 P positive regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
3368 O_BomoIG103031_complete:A_BomoIG_DN29895_c5_g3_i4
147bp
 protein_FAN_isoform_X1_[Bombyx_mori]
GO:0005123 F death receptor binding
GO:0005543 F phospholipid binding
GO:0012505 C endomembrane system
GO:0016230 F sphingomyelin phosphodiesterase activator activity
GO:0019898 C extrinsic component of membrane
GO:0043065 P positive regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
3369 O_BomoIG103032_complete:A_BomoIG_DN29895_c5_g3_i5
275bp
 protein_FAN_isoform_X2_[Bombyx_mori]
GO:0005123 F death receptor binding
GO:0005543 F phospholipid binding
GO:0012505 C endomembrane system
GO:0016230 F sphingomyelin phosphodiesterase activator activity
GO:0019898 C extrinsic component of membrane
GO:0043065 P positive regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
3370 O_BomoIG103033_complete:A_BomoIG_DN29895_c5_g3_i5
147bp
 protein_FAN_isoform_X1_[Bombyx_mori]
GO:0005123 F death receptor binding
GO:0005543 F phospholipid binding
GO:0012505 C endomembrane system
GO:0016230 F sphingomyelin phosphodiesterase activator activity
GO:0019898 C extrinsic component of membrane
GO:0043065 P positive regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
3371 O_BomoIG103034_3prime_partial:A_BomoIG_DN29895_c5_g3_i6
342bp
 protein_FAN_isoform_X1_[Bombyx_mori]
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006672 P ceramide metabolic process
GO:0007165 P signal transduction
GO:0012505 C endomembrane system
GO:0016230 F sphingomyelin phosphodiesterase activator activity
GO:0019898 C extrinsic component of membrane
GO:0043065 P positive regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
GO:2000304 P positive regulation of ceramide biosynthetic process
3372 O_BomoIG103035_3prime_partial:A_BomoIG_DN29895_c5_g3_i6
106bp
 PREDICTED:_uncharacterized_protein_LOC105118166_[Populus_euphratica]
3373 O_BomoIG103036_3prime_partial:A_BomoIG_DN29895_c5_g3_i7
159bp
 protein_FAN_isoform_X1_[Bombyx_mori]
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006672 P ceramide metabolic process
GO:0007165 P signal transduction
GO:0012505 C endomembrane system
GO:0016230 F sphingomyelin phosphodiesterase activator activity
GO:0019898 C extrinsic component of membrane
GO:0043065 P positive regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
GO:2000304 P positive regulation of ceramide biosynthetic process
3374 O_BomoIG103037_internal:A_BomoIG_DN29895_c5_g3_i9
242bp
 protein_FAN_isoform_X1_[Bombyx_mori]
GO:0005123 F death receptor binding
GO:0005543 F phospholipid binding
GO:0012505 C endomembrane system
GO:0016230 F sphingomyelin phosphodiesterase activator activity
GO:0019898 C extrinsic component of membrane
GO:0043065 P positive regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
3375 O_BomoIG103038_internal:A_BomoIG_DN29895_c5_g3_i12
119bp
 PREDICTED:_uncharacterized_protein_LOC105118166_[Populus_euphratica]
3376 O_BomoIG103039_3prime_partial:A_BomoIG_DN29895_c5_g3_i13
344bp
 protein_FAN_isoform_X1_[Bombyx_mori]
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006672 P ceramide metabolic process
GO:0007165 P signal transduction
GO:0012505 C endomembrane system
GO:0016230 F sphingomyelin phosphodiesterase activator activity
GO:0019898 C extrinsic component of membrane
GO:0043065 P positive regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
GO:2000304 P positive regulation of ceramide biosynthetic process
3377 O_BomoIG10303_complete:A_BomoIG_DN33786_c1_g2_i18
247bp
 uncharacterized_protein_LOC101738733_isoform_X2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
3378 O_BomoIG103040_complete:A_BomoIG_DN29895_c5_g3_i14
219bp
 protein_FAN_isoform_X2_[Bombyx_mori]
GO:0005123 F death receptor binding
GO:0005543 F phospholipid binding
GO:0012505 C endomembrane system
GO:0016230 F sphingomyelin phosphodiesterase activator activity
GO:0019898 C extrinsic component of membrane
GO:0043065 P positive regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
3379 O_BomoIG103041_3prime_partial:A_BomoIG_DN29895_c5_g2_i2
526bp
 exportin-2_[Bombyx_mori]
GO:0005049 F nuclear export signal receptor activity
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006606 P protein import into nucleus
GO:0006611 P protein export from nucleus
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006909 P phagocytosis
GO:0008536 F small GTPase binding
GO:0015031 P protein transport
GO:0022008 P neurogenesis
GO:0051533 P positive regulation of calcineurin-NFAT signaling cascade
3380 O_BomoIG103042_5prime_partial:A_BomoIG_DN29895_c5_g2_i2
196bp
3381 O_BomoIG103043_3prime_partial:A_BomoIG_DN29895_c5_g3_i15
344bp
 protein_FAN_isoform_X1_[Bombyx_mori]
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006672 P ceramide metabolic process
GO:0007165 P signal transduction
GO:0012505 C endomembrane system
GO:0016230 F sphingomyelin phosphodiesterase activator activity
GO:0019898 C extrinsic component of membrane
GO:0043065 P positive regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
GO:2000304 P positive regulation of ceramide biosynthetic process
3382 O_BomoIG103044_3prime_partial:A_BomoIG_DN29895_c5_g3_i15
106bp
 PREDICTED:_uncharacterized_protein_LOC105118166_[Populus_euphratica]
3383 O_BomoIG103045_complete:A_BomoIG_DN29829_c6_g2_i1
510bp
 protein_FAM13A_isoform_X1_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3384 O_BomoIG103046_complete:A_BomoIG_DN29829_c6_g2_i2
139bp
 protein_FAM13A_isoform_X2_[Helicoverpa_armigera]
3385 O_BomoIG103047_complete:A_BomoIG_DN29829_c6_g2_i3
510bp
 protein_FAM13A_isoform_X1_[Helicoverpa_armigera]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3386 O_BomoIG103048_complete:A_BomoIG_DN29829_c6_g2_i4
296bp
 uncharacterized_protein_LOC101745154_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3387 O_BomoIG103049_complete:A_BomoIG_DN29829_c6_g6_i1
216bp
 zinc_finger_protein_664-like_[Bombyx_mori]
3388 O_BomoIG10304_5prime_partial:A_BomoIG_DN33790_c2_g3_i1
197bp
 E3_ubiquitin-protein_ligase_TRIM33_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030218 P erythrocyte differentiation
GO:0033333 P fin development
GO:0034243 P regulation of transcription elongation from RNA polymerase II promoter
GO:0035162 P embryonic hemopoiesis
GO:0035166 P post-embryonic hemopoiesis
GO:0046872 F metal ion binding
GO:0060215 P primitive hemopoiesis
3389 O_BomoIG103050_complete:A_BomoIG_DN29829_c6_g2_i7
296bp
 uncharacterized_protein_LOC101745154_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
3390 O_BomoIG103051_complete:A_BomoIG_DN29829_c6_g6_i2
399bp
 zinc_finger_protein_664-like_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
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