SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/104180
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1831 O_BomoIG101649_complete:A_BomoIG_DN30779_c0_g1_i1
123bp
1832 O_BomoIG10164_complete:A_BomoIG_DN33791_c0_g4_i1
128bp
1833 O_BomoIG101650_complete:A_BomoIG_DN30779_c0_g1_i1
116bp
1834 O_BomoIG101651_complete:A_BomoIG_DN30779_c0_g1_i1
105bp
1835 O_BomoIG101652_complete:A_BomoIG_DN30779_c0_g2_i1
211bp
 zinc_transporter_2_[Bombyx_mori]
GO:0005385 F zinc ion transmembrane transporter activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005770 C late endosome
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006829 P zinc ion transport
GO:0008324 F cation transmembrane transporter activity
GO:0010043 P response to zinc ion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0055085 P transmembrane transport
GO:0061090 P positive regulation of sequestering of zinc ion
GO:0071577 P zinc ion transmembrane transport
1836 O_BomoIG101653_complete:A_BomoIG_DN30779_c0_g2_i1
120bp
1837 O_BomoIG101654_internal:A_BomoIG_DN30779_c0_g3_i1
1611bp
 uncharacterized_LOC101743290_precursor_[Bombyx_mori]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0016055 P Wnt signaling pathway
1838 O_BomoIG101655_5prime_partial:A_BomoIG_DN30779_c0_g3_i1
422bp
1839 O_BomoIG101656_complete:A_BomoIG_DN30779_c0_g3_i1
349bp
1840 O_BomoIG101657_3prime_partial:A_BomoIG_DN30779_c0_g4_i1
1837bp
 uncharacterized_LOC101743290_precursor_[Bombyx_mori]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0016055 P Wnt signaling pathway
1841 O_BomoIG101658_complete:A_BomoIG_DN30779_c0_g4_i1
121bp
1842 O_BomoIG101659_complete:A_BomoIG_DN30779_c0_g4_i1
105bp
1843 O_BomoIG10165_3prime_partial:A_BomoIG_DN33791_c1_g1_i1
116bp
 uncharacterized_protein_LOC105841541_[Bombyx_mori]
1844 O_BomoIG101660_complete:A_BomoIG_DN30779_c0_g1_i2
724bp
 Golgi-specific_brefeldin_A-resistance_guanine_nucleotide_exchange_factor_1,_partial_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005811 C lipid droplet
GO:0006810 P transport
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
1845 O_BomoIG101661_complete:A_BomoIG_DN30779_c0_g1_i2
105bp
1846 O_BomoIG101662_3prime_partial:A_BomoIG_DN30779_c0_g1_i3
133bp
 ubiquitin_carboxyl-terminal_hydrolase_16_[Bombyx_mori]
GO:0003713 F transcription coactivator activity
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008270 F zinc ion binding
GO:0010468 P regulation of gene expression
GO:0016568 P chromatin organization
GO:0016578 P histone deubiquitination
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
GO:0042393 F histone binding
GO:0043130 F ubiquitin binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0051289 P protein homotetramerization
GO:0051301 P cell division
GO:0051726 P regulation of cell cycle
GO:0070537 P histone H2A K63-linked deubiquitination
1847 O_BomoIG101663_5prime_partial:A_BomoIG_DN30779_c0_g1_i4
143bp
 Golgi-specific_brefeldin_A-resistance_guanine_nucleotide_exchange_factor_1,_partial_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0002263 P cell activation involved in immune response
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005788 C endoplasmic reticulum lumen
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005801 C cis-Golgi network
GO:0005802 C trans-Golgi network
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0006895 P Golgi to endosome transport
GO:0007030 P Golgi organization
GO:0007346 P regulation of mitotic cell cycle
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0030593 P neutrophil chemotaxis
GO:0031252 C cell leading edge
GO:0032012 P regulation of ARF protein signal transduction
GO:0034067 P protein localization to Golgi apparatus
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043547 P positive regulation of GTPase activity
GO:0048205 P COPI coating of Golgi vesicle
GO:0061162 P establishment of monopolar cell polarity
GO:0070973 P protein localization to endoplasmic reticulum exit site
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
GO:0090166 P Golgi disassembly
GO:0097111 P endoplasmic reticulum-Golgi intermediate compartment organization
GO:1903409 P reactive oxygen species biosynthetic process
GO:1903420 P protein localization to endoplasmic reticulum tubular network
GO:2000008 P regulation of protein localization to cell surface
1848 O_BomoIG101664_3prime_partial:A_BomoIG_DN30779_c0_g2_i4
301bp
 zinc_transporter_2_[Bombyx_mori]
GO:0005385 F zinc ion transmembrane transporter activity
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005770 C late endosome
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0005886 C plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006812 P cation transport
GO:0006829 P zinc ion transport
GO:0008324 F cation transmembrane transporter activity
GO:0010043 P response to zinc ion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016023 C cytoplasmic vesicle
GO:0055085 P transmembrane transport
GO:0061088 P regulation of sequestering of zinc ion
GO:0061090 P positive regulation of sequestering of zinc ion
GO:0071577 P zinc ion transmembrane transport
1849 O_BomoIG101665_5prime_partial:A_BomoIG_DN30779_c0_g2_i4
169bp
1850 O_BomoIG101666_internal:A_BomoIG_DN30779_c0_g4_i2
371bp
 uncharacterized_LOC101743290_precursor_[Bombyx_mori]
1851 O_BomoIG101667_complete:A_BomoIG_DN30779_c0_g4_i2
121bp
1852 O_BomoIG101668_complete:A_BomoIG_DN30779_c0_g5_i1
252bp
 dolichyldiphosphatase_1-like_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006486 P protein glycosylation
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016787 F hydrolase activity
GO:0047874 F dolichyldiphosphatase activity
1853 O_BomoIG101669_3prime_partial:A_BomoIG_DN30779_c0_g3_i2
926bp
 uncharacterized_LOC101743290_precursor_[Bombyx_mori]
GO:0005319 F lipid transporter activity
GO:0005576 C extracellular region
GO:0006810 P transport
GO:0006869 P lipid transport
GO:0008289 F lipid binding
GO:0016055 P Wnt signaling pathway
1854 O_BomoIG10166_complete:A_BomoIG_DN33791_c1_g1_i1
100bp
1855 O_BomoIG101670_5prime_partial:A_BomoIG_DN30779_c0_g3_i2
606bp
 uncharacterized_LOC101743290_precursor_[Bombyx_mori]
1856 O_BomoIG101671_5prime_partial:A_BomoIG_DN30779_c0_g3_i2
422bp
1857 O_BomoIG101672_complete:A_BomoIG_DN30779_c0_g3_i2
157bp
1858 O_BomoIG101673_complete:A_BomoIG_DN30779_c0_g1_i5
465bp
 Golgi-specific_brefeldin_A-resistance_guanine_nucleotide_exchange_factor_1,_partial_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0002263 P cell activation involved in immune response
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005547 F phosphatidylinositol-3,4,5-trisphosphate binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005788 C endoplasmic reticulum lumen
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005795 C Golgi stack
GO:0005801 C cis-Golgi network
GO:0005802 C trans-Golgi network
GO:0005811 C lipid droplet
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0006892 P post-Golgi vesicle-mediated transport
GO:0006895 P Golgi to endosome transport
GO:0007030 P Golgi organization
GO:0007346 P regulation of mitotic cell cycle
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016032 P viral process
GO:0030593 P neutrophil chemotaxis
GO:0031252 C cell leading edge
GO:0032012 P regulation of ARF protein signal transduction
GO:0034067 P protein localization to Golgi apparatus
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043547 P positive regulation of GTPase activity
GO:0048205 P COPI coating of Golgi vesicle
GO:0061162 P establishment of monopolar cell polarity
GO:0070973 P protein localization to endoplasmic reticulum exit site
GO:0080025 F phosphatidylinositol-3,5-bisphosphate binding
GO:0090166 P Golgi disassembly
GO:0097111 P endoplasmic reticulum-Golgi intermediate compartment organization
GO:1903409 P reactive oxygen species biosynthetic process
GO:1903420 P protein localization to endoplasmic reticulum tubular network
GO:2000008 P regulation of protein localization to cell surface
1859 O_BomoIG101674_complete:A_BomoIG_DN30779_c0_g1_i5
387bp
 Golgi-specific_brefeldin_A-resistance_guanine_nucleotide_exchange_factor_1,_partial_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005811 C lipid droplet
GO:0006810 P transport
GO:0008289 F lipid binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
1860 O_BomoIG101675_complete:A_BomoIG_DN30779_c0_g1_i5
380bp
previous next from show/104180

- SilkBase 1999-2023 -