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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1621 O_BomoIG10145_complete:A_BomoIG_DN33754_c2_g3_i4
186bp
 probable_G-protein_coupled_receptor_Mth-like_5_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008340 P determination of adult lifespan
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0042594 P response to starvation
1622 O_BomoIG101460_complete:A_BomoIG_DN30742_c1_g4_i3
184bp
 Envelope_fusion_protein_[Papilio_xuthus]
1623 O_BomoIG101461_complete:A_BomoIG_DN30742_c1_g4_i3
103bp
1624 O_BomoIG101462_5prime_partial:A_BomoIG_DN30742_c1_g4_i4
258bp
1625 O_BomoIG101463_complete:A_BomoIG_DN30742_c1_g4_i4
156bp
 Envelope_fusion_protein_[Papilio_xuthus]
1626 O_BomoIG101464_complete:A_BomoIG_DN30742_c1_g4_i4
103bp
1627 O_BomoIG101465_complete:A_BomoIG_DN30742_c1_g4_i6
184bp
 Envelope_fusion_protein_[Papilio_xuthus]
1628 O_BomoIG101466_5prime_partial:A_BomoIG_DN30742_c1_g2_i2
163bp
 uncharacterized_protein_LOC101744209_[Bombyx_mori]
1629 O_BomoIG101467_3prime_partial:A_BomoIG_DN30742_c1_g2_i2
112bp
1630 O_BomoIG101468_5prime_partial:A_BomoIG_DN30742_c1_g4_i7
258bp
1631 O_BomoIG101469_complete:A_BomoIG_DN30751_c4_g1_i1
308bp
 U5_small_nuclear_ribonucleoprotein_40_kDa_protein_[Bombyx_mori]
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
1632 O_BomoIG10146_5prime_partial:A_BomoIG_DN33770_c1_g1_i1
101bp
 AP-1_complex_subunit_gamma-1_isoform_X4_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0008565 F obsolete protein transporter activity
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0019894 F kinesin binding
GO:0030117 C membrane coat
GO:0030131 C clathrin adaptor complex
GO:0030136 C clathrin-coated vesicle
GO:0030665 C clathrin-coated vesicle membrane
GO:0030742 F GTP-dependent protein binding
GO:0031410 C cytoplasmic vesicle
GO:0035646 P endosome to melanosome transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0043323 P positive regulation of natural killer cell degranulation
GO:0045954 P positive regulation of natural killer cell mediated cytotoxicity
GO:0048471 C perinuclear region of cytoplasm
GO:0055037 C recycling endosome
GO:0090160 P Golgi to lysosome transport
1633 O_BomoIG101470_3prime_partial:A_BomoIG_DN30751_c4_g3_i1
448bp
 hyccin_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0042552 P myelination
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090002 P protein localization to plasma membrane
1634 O_BomoIG101471_5prime_partial:A_BomoIG_DN30751_c4_g3_i1
166bp
1635 O_BomoIG101472_internal:A_BomoIG_DN30751_c4_g3_i2
108bp
 hyccin_[Bombyx_mori]
1636 O_BomoIG101473_5prime_partial:A_BomoIG_DN30751_c4_g3_i2
101bp
1637 O_BomoIG101474_3prime_partial:A_BomoIG_DN30751_c4_g3_i3
186bp
 hyccin_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0042552 P myelination
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090002 P protein localization to plasma membrane
1638 O_BomoIG101475_5prime_partial:A_BomoIG_DN30751_c4_g3_i3
166bp
1639 O_BomoIG101476_complete:A_BomoIG_DN30751_c4_g1_i2
350bp
 U5_small_nuclear_ribonucleoprotein_40_kDa_protein_[Bombyx_mori]
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
1640 O_BomoIG101477_complete:A_BomoIG_DN30751_c4_g1_i2
343bp
 nucleoporin-like_protein_amo1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031965 C nuclear membrane
GO:0046872 F metal ion binding
GO:0051028 P mRNA transport
1641 O_BomoIG101478_complete:A_BomoIG_DN30751_c4_g3_i4
234bp
 hyccin_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0042552 P myelination
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090002 P protein localization to plasma membrane
1642 O_BomoIG101479_complete:A_BomoIG_DN30751_c4_g1_i3
343bp
 nucleoporin-like_protein_amo1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005643 C nuclear pore
GO:0006810 P transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0031965 C nuclear membrane
GO:0046872 F metal ion binding
GO:0051028 P mRNA transport
1643 O_BomoIG10147_complete:A_BomoIG_DN33770_c2_g1_i1
175bp
 protein_enabled_homolog_[Bombyx_mori]
1644 O_BomoIG101480_complete:A_BomoIG_DN30751_c4_g1_i4
233bp
 U5_small_nuclear_ribonucleoprotein_40_kDa_protein_[Bombyx_mori]
GO:0000375 P RNA splicing, via transesterification reactions
GO:0000398 P mRNA splicing, via spliceosome
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0005682 C U5 snRNP
GO:0005732 C sno(s)RNA-containing ribonucleoprotein complex
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0044822 F RNA binding
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
1645 O_BomoIG101481_3prime_partial:A_BomoIG_DN30751_c4_g3_i5
448bp
 hyccin_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0042552 P myelination
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090002 P protein localization to plasma membrane
1646 O_BomoIG101482_5prime_partial:A_BomoIG_DN30751_c4_g3_i5
166bp
1647 O_BomoIG101483_3prime_partial:A_BomoIG_DN30751_c4_g3_i6
399bp
 hyccin_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0042552 P myelination
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090002 P protein localization to plasma membrane
1648 O_BomoIG101484_5prime_partial:A_BomoIG_DN30751_c4_g3_i6
209bp
1649 O_BomoIG101485_complete:A_BomoIG_DN30751_c4_g3_i7
234bp
 hyccin_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0042552 P myelination
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090002 P protein localization to plasma membrane
1650 O_BomoIG101486_3prime_partial:A_BomoIG_DN30751_c4_g3_i8
448bp
 hyccin_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0016020 C membrane
GO:0042552 P myelination
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0090002 P protein localization to plasma membrane
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