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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1291 O_BomoIG101162_complete:A_BomoIG_DN30760_c5_g2_i12
285bp
 cell_cycle_checkpoint_protein_RAD17_isoform_X2_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0000166 F nucleotide binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0031389 C Rad17 RFC-like complex
1292 O_BomoIG101163_complete:A_BomoIG_DN30760_c5_g6_i3
555bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
1293 O_BomoIG101164_complete:A_BomoIG_DN30760_c5_g2_i13
105bp
 cell_cycle_checkpoint_protein_RAD17_isoform_X3_[Bombyx_mori]
1294 O_BomoIG101165_internal:A_BomoIG_DN30760_c5_g6_i4
219bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005737 C cytoplasm
1295 O_BomoIG101166_complete:A_BomoIG_DN30760_c5_g2_i14
308bp
 cell_cycle_checkpoint_protein_RAD17_isoform_X3_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0000166 F nucleotide binding
GO:0000781 C chromosome, telomeric region
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007275 P multicellular organism development
GO:0008156 P negative regulation of DNA replication
GO:0031389 C Rad17 RFC-like complex
GO:0042325 P regulation of phosphorylation
1296 O_BomoIG101167_complete:A_BomoIG_DN30760_c5_g2_i14
154bp
 cell_cycle_checkpoint_protein_RAD17_isoform_X1_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0000166 F nucleotide binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0031389 C Rad17 RFC-like complex
1297 O_BomoIG101168_5prime_partial:A_BomoIG_DN30760_c5_g2_i15
132bp
 cell_cycle_checkpoint_protein_RAD17_isoform_X1_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0000166 F nucleotide binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0031389 C Rad17 RFC-like complex
1298 O_BomoIG101169_complete:A_BomoIG_DN30760_c5_g2_i15
105bp
 cell_cycle_checkpoint_protein_RAD17_isoform_X3_[Bombyx_mori]
1299 O_BomoIG10116_complete:A_BomoIG_DN33700_c1_g2_i11
195bp
 multiple_inositol_polyphosphate_phosphatase_1_isoform_X1_[Bombyx_mori]
1300 O_BomoIG101170_complete:A_BomoIG_DN30760_c5_g2_i16
285bp
 cell_cycle_checkpoint_protein_RAD17_isoform_X2_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0000166 F nucleotide binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0031389 C Rad17 RFC-like complex
1301 O_BomoIG101171_complete:A_BomoIG_DN30760_c5_g2_i17
237bp
 cell_cycle_checkpoint_protein_RAD17_isoform_X2_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0000166 F nucleotide binding
GO:0000781 C chromosome, telomeric region
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007275 P multicellular organism development
GO:0008156 P negative regulation of DNA replication
GO:0031389 C Rad17 RFC-like complex
GO:0042325 P regulation of phosphorylation
1302 O_BomoIG101172_5prime_partial:A_BomoIG_DN30760_c5_g2_i17
132bp
 cell_cycle_checkpoint_protein_RAD17_isoform_X1_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0000166 F nucleotide binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0031389 C Rad17 RFC-like complex
1303 O_BomoIG101173_3prime_partial:A_BomoIG_DN30760_c5_g6_i6
631bp
 endonuclease-reverse_transcriptase_[Bombyx_mori]
1304 O_BomoIG101174_complete:A_BomoIG_DN30760_c5_g2_i18
154bp
 cell_cycle_checkpoint_protein_RAD17_isoform_X1_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0000166 F nucleotide binding
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0031389 C Rad17 RFC-like complex
1305 O_BomoIG101175_complete:A_BomoIG_DN30760_c5_g2_i18
105bp
 cell_cycle_checkpoint_protein_RAD17_isoform_X3_[Bombyx_mori]
GO:0000077 P DNA damage checkpoint signaling
GO:0000166 F nucleotide binding
GO:0000781 C chromosome, telomeric region
GO:0003689 F DNA clamp loader activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007275 P multicellular organism development
GO:0008156 P negative regulation of DNA replication
GO:0031389 C Rad17 RFC-like complex
GO:0042325 P regulation of phosphorylation
1306 O_BomoIG101176_complete:A_BomoIG_DN30760_c5_g2_i18
105bp
 cell_cycle_checkpoint_protein_RAD17_isoform_X3_[Bombyx_mori]
1307 O_BomoIG101177_5prime_partial:A_BomoIG_DN30765_c4_g1_i1
209bp
1308 O_BomoIG101178_complete:A_BomoIG_DN30765_c4_g1_i1
164bp
 phenylalanyl-tRNA_synthetase_alpha_subunit_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004826 F phenylalanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006432 P phenylalanyl-tRNA aminoacylation
GO:0009328 C phenylalanine-tRNA ligase complex
GO:0016874 F ligase activity
GO:0043039 P tRNA aminoacylation
1309 O_BomoIG101179_complete:A_BomoIG_DN30765_c4_g1_i2
305bp
 phenylalanyl-tRNA_synthetase_alpha_subunit_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004826 F phenylalanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006432 P phenylalanyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0009328 C phenylalanine-tRNA ligase complex
GO:0016874 F ligase activity
GO:0043039 P tRNA aminoacylation
1310 O_BomoIG10117_complete:A_BomoIG_DN33700_c1_g2_i11
184bp
 multiple_inositol_polyphosphate_phosphatase_1_isoform_X2_[Bombyx_mori]
GO:0001503 P ossification
GO:0003993 F acid phosphatase activity
GO:0004446 F inositol-hexakisphosphate phosphatase activity
GO:0005783 C endoplasmic reticulum
GO:0005788 C endoplasmic reticulum lumen
GO:0006797 P polyphosphate metabolic process
GO:0008969 F protein histidine phosphatase activity
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0030282 P bone mineralization
GO:0030351 F inositol-1,3,4,5,6-pentakisphosphate 3-phosphatase activity
GO:0034417 F bisphosphoglycerate 3-phosphatase activity
GO:0043647 P inositol phosphate metabolic process
GO:0051717 F inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity
GO:0052826 F inositol hexakisphosphate 2-phosphatase activity
GO:0070062 C extracellular exosome
1311 O_BomoIG101180_complete:A_BomoIG_DN30765_c4_g1_i2
100bp
1312 O_BomoIG101181_3prime_partial:A_BomoIG_DN30765_c4_g1_i4
354bp
 phenylalanyl-tRNA_synthetase_alpha_subunit_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004826 F phenylalanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006432 P phenylalanyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0043039 P tRNA aminoacylation
1313 O_BomoIG101182_5prime_partial:A_BomoIG_DN30765_c4_g1_i4
106bp
1314 O_BomoIG101183_complete:A_BomoIG_DN30765_c4_g1_i4
100bp
1315 O_BomoIG101184_complete:A_BomoIG_DN30765_c4_g2_i1
291bp
 CD63_antigen_[Bombyx_mori]
GO:0002092 P positive regulation of receptor internalization
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005771 C multivesicular body
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0009986 C cell surface
GO:0010008 C endosome membrane
GO:0010633 P negative regulation of epithelial cell migration
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016477 P cell migration
GO:0030855 P epithelial cell differentiation
GO:0031226 C intrinsic component of plasma membrane
GO:0031902 C late endosome membrane
GO:0031904 C endosome lumen
GO:0032403 F protein-containing complex binding
GO:0032585 C multivesicular body membrane
GO:0034613 P cellular protein localization
GO:0035646 P endosome to melanosome transport
GO:0042470 C melanosome
GO:0043234 C protein-containing complex
GO:0043473 P pigmentation
GO:0045785 P positive regulation of cell adhesion
GO:0045807 P positive regulation of endocytosis
GO:0048757 P pigment granule maturation
GO:0050931 P pigment cell differentiation
GO:0070062 C extracellular exosome
GO:0097487 C multivesicular body, internal vesicle
GO:1900746 P regulation of vascular endothelial growth factor signaling pathway
GO:2000680 P obsolete regulation of rubidium ion transport
GO:2001046 P positive regulation of integrin-mediated signaling pathway
1316 O_BomoIG101185_3prime_partial:A_BomoIG_DN30765_c4_g2_i2
187bp
 CD63_antigen_[Bombyx_mori]
GO:0002092 P positive regulation of receptor internalization
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005770 C late endosome
GO:0005771 C multivesicular body
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0007155 P cell adhesion
GO:0007160 P cell-matrix adhesion
GO:0009986 C cell surface
GO:0010008 C endosome membrane
GO:0010633 P negative regulation of epithelial cell migration
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016477 P cell migration
GO:0030855 P epithelial cell differentiation
GO:0031226 C intrinsic component of plasma membrane
GO:0031902 C late endosome membrane
GO:0031904 C endosome lumen
GO:0032403 F protein-containing complex binding
GO:0032585 C multivesicular body membrane
GO:0034613 P cellular protein localization
GO:0035646 P endosome to melanosome transport
GO:0042470 C melanosome
GO:0043234 C protein-containing complex
GO:0043473 P pigmentation
GO:0045785 P positive regulation of cell adhesion
GO:0045807 P positive regulation of endocytosis
GO:0048757 P pigment granule maturation
GO:0050931 P pigment cell differentiation
GO:0070062 C extracellular exosome
GO:0097487 C multivesicular body, internal vesicle
GO:1900746 P regulation of vascular endothelial growth factor signaling pathway
GO:2000680 P obsolete regulation of rubidium ion transport
GO:2001046 P positive regulation of integrin-mediated signaling pathway
1317 O_BomoIG101186_5prime_partial:A_BomoIG_DN30765_c4_g1_i5
111bp
 phenylalanine--tRNA_ligase_alpha_subunit-like_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004826 F phenylalanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006432 P phenylalanyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0009328 C phenylalanine-tRNA ligase complex
GO:0016874 F ligase activity
GO:0043039 P tRNA aminoacylation
1318 O_BomoIG101187_complete:A_BomoIG_DN30765_c4_g1_i6
222bp
 phenylalanyl-tRNA_synthetase_alpha_subunit_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004826 F phenylalanine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006432 P phenylalanyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0009328 C phenylalanine-tRNA ligase complex
GO:0016874 F ligase activity
GO:0043039 P tRNA aminoacylation
1319 O_BomoIG101188_complete:A_BomoIG_DN30765_c4_g1_i6
100bp
1320 O_BomoIG101189_3prime_partial:A_BomoIG_DN30765_c4_g5_i1
469bp
 26S_proteasome_non-ATPase_regulatory_subunit_5_isoform_X1_[Bombyx_mori]
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0022624 C proteasome accessory complex
GO:0043248 P proteasome assembly
GO:0070682 P proteasome regulatory particle assembly
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