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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1051 O_BomoIG100947_complete:A_BomoIG_DN30795_c6_g1_i5
352bp
 gelsolin_[Bombyx_mori]
GO:0003779 F actin binding
GO:0005509 F calcium ion binding
GO:0005576 C extracellular region
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005884 C actin filament
GO:0006909 P phagocytosis
GO:0030041 P actin filament polymerization
GO:0045010 P actin nucleation
GO:0046872 F metal ion binding
GO:0051014 P actin filament severing
GO:0051016 P barbed-end actin filament capping
1052 O_BomoIG100948_internal:A_BomoIG_DN30777_c0_g1_i1
116bp
 ell-associated_factor_Eaf_[Bombyx_mori]
1053 O_BomoIG100949_complete:A_BomoIG_DN30777_c0_g1_i2
336bp
 ell-associated_factor_Eaf_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0032783 C super elongation complex
GO:0045893 P positive regulation of transcription, DNA-templated
1054 O_BomoIG10094_5prime_partial:A_BomoIG_DN33756_c2_g1_i8
125bp
 endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
1055 O_BomoIG100950_complete:A_BomoIG_DN30777_c0_g1_i2
254bp
1056 O_BomoIG100951_complete:A_BomoIG_DN30777_c0_g1_i2
119bp
1057 O_BomoIG100952_5prime_partial:A_BomoIG_DN30777_c0_g1_i5
149bp
 ell-associated_factor_Eaf_[Bombyx_mori]
1058 O_BomoIG100953_5prime_partial:A_BomoIG_DN30777_c0_g1_i5
147bp
1059 O_BomoIG100954_complete:A_BomoIG_DN30777_c1_g3_i3
137bp
 phosphorylase_b_kinase_gamma_catalytic_chain,_skeletal_muscle/heart_isoform_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019899 F enzyme binding
1060 O_BomoIG100955_complete:A_BomoIG_DN30777_c1_g3_i3
111bp
 phosphorylase_b_kinase_gamma_catalytic_chain,_skeletal_muscle/heart_isoform_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019899 F enzyme binding
GO:0050321 F tau-protein kinase activity
1061 O_BomoIG100956_5prime_partial:A_BomoIG_DN30777_c1_g7_i1
615bp
 E3_ubiquitin-protein_ligase_RNF168_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0003682 F chromatin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0010212 P response to ionizing radiation
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016874 F ligase activity
GO:0031491 F nucleosome binding
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0034644 P cellular response to UV
GO:0035518 P histone H2A monoubiquitination
GO:0035861 C site of double-strand break
GO:0036351 P histone H2A-K13 ubiquitination
GO:0036352 P histone H2A-K15 ubiquitination
GO:0042393 F histone binding
GO:0043130 F ubiquitin binding
GO:0043234 C protein-containing complex
GO:0045190 P isotype switching
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:0070534 P protein K63-linked ubiquitination
GO:0070535 P histone H2A K63-linked ubiquitination
GO:1903827 P regulation of protein localization
GO:1990391 C DNA repair complex
1062 O_BomoIG100957_complete:A_BomoIG_DN30777_c1_g7_i1
253bp
1063 O_BomoIG100958_5prime_partial:A_BomoIG_DN30777_c1_g3_i4
184bp
 phosphorylase_b_kinase_gamma_catalytic_chain,_skeletal_muscle/heart_isoform_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019899 F enzyme binding
GO:0050321 F tau-protein kinase activity
1064 O_BomoIG100959_complete:A_BomoIG_DN30777_c1_g7_i2
180bp
1065 O_BomoIG10095_complete:A_BomoIG_DN33700_c1_g1_i1
151bp
 PREDICTED:_uncharacterized_protein_LOC106720787_[Papilio_machaon]
1066 O_BomoIG100960_complete:A_BomoIG_DN30777_c1_g7_i2
136bp
 E3_ubiquitin-protein_ligase_RNF168_[Bombyx_mori]
1067 O_BomoIG100961_internal:A_BomoIG_DN30777_c1_g7_i3
211bp
 E3_ubiquitin-protein_ligase_RNF168_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0003682 F chromatin binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006302 P double-strand break repair
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0010212 P response to ionizing radiation
GO:0016567 P protein ubiquitination
GO:0016568 P chromatin organization
GO:0016874 F ligase activity
GO:0031491 F nucleosome binding
GO:0034244 P negative regulation of transcription elongation from RNA polymerase II promoter
GO:0034644 P cellular response to UV
GO:0035518 P histone H2A monoubiquitination
GO:0035861 C site of double-strand break
GO:0036351 P histone H2A-K13 ubiquitination
GO:0036352 P histone H2A-K15 ubiquitination
GO:0042393 F histone binding
GO:0043130 F ubiquitin binding
GO:0043234 C protein-containing complex
GO:0045190 P isotype switching
GO:0045739 P positive regulation of DNA repair
GO:0046872 F metal ion binding
GO:0070530 F K63-linked polyubiquitin modification-dependent protein binding
GO:0070534 P protein K63-linked ubiquitination
GO:0070535 P histone H2A K63-linked ubiquitination
GO:1903827 P regulation of protein localization
GO:1990391 C DNA repair complex
1068 O_BomoIG100962_internal:A_BomoIG_DN30777_c1_g7_i4
166bp
 E3_ubiquitin-protein_ligase_RNF168_[Bombyx_mori]
1069 O_BomoIG100963_complete:A_BomoIG_DN30777_c1_g3_i5
419bp
 phosphorylase_b_kinase_gamma_catalytic_chain,_skeletal_muscle/heart_isoform_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0005980 P glycogen catabolic process
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019899 F enzyme binding
GO:0050321 F tau-protein kinase activity
1070 O_BomoIG100964_complete:A_BomoIG_DN30777_c1_g3_i6
215bp
 phosphorylase_b_kinase_gamma_catalytic_chain,_skeletal_muscle/heart_isoform_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019899 F enzyme binding
1071 O_BomoIG100965_complete:A_BomoIG_DN30777_c1_g3_i7
324bp
 phosphorylase_b_kinase_gamma_catalytic_chain,_skeletal_muscle/heart_isoform_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004689 F phosphorylase kinase activity
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005829 C cytosol
GO:0005964 C phosphorylase kinase complex
GO:0005975 P carbohydrate metabolic process
GO:0005977 P glycogen metabolic process
GO:0005978 P glycogen biosynthetic process
GO:0005980 P glycogen catabolic process
GO:0006468 P protein phosphorylation
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019899 F enzyme binding
GO:0050321 F tau-protein kinase activity
1072 O_BomoIG100966_5prime_partial:A_BomoIG_DN30777_c1_g2_i3
352bp
 WD_repeat-containing_protein_44_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0005874 C microtubule
GO:0010008 C endosome membrane
GO:0016020 C membrane
GO:0017137 F small GTPase binding
GO:0030334 P regulation of cell migration
GO:0048471 C perinuclear region of cytoplasm
1073 O_BomoIG100967_internal:A_BomoIG_DN30777_c2_g1_i1
196bp
 uncharacterized_protein_LOC110385588_[Bombyx_mori]
1074 O_BomoIG100968_3prime_partial:A_BomoIG_DN30741_c0_g1_i1
1122bp
 protein_piccolo_[Bombyx_mori]
GO:0005886 C plasma membrane
GO:0007155 P cell adhesion
GO:0007339 P binding of sperm to zona pellucida
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0050840 F extracellular matrix binding
GO:2000359 P regulation of binding of sperm to zona pellucida
1075 O_BomoIG100969_5prime_partial:A_BomoIG_DN30741_c0_g1_i1
169bp
1076 O_BomoIG10096_5prime_partial:A_BomoIG_DN33700_c1_g1_i1
106bp
1077 O_BomoIG100970_complete:A_BomoIG_DN30741_c0_g1_i1
130bp
1078 O_BomoIG100971_complete:A_BomoIG_DN30741_c0_g1_i1
112bp
1079 O_BomoIG100972_complete:A_BomoIG_DN30741_c0_g1_i1
109bp
1080 O_BomoIG100973_complete:A_BomoIG_DN30741_c0_g2_i1
100bp
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