Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
1021	O_BomoIG10091_internal:A_BomoIG_DN33756_c2_g1_i6 245bp	Bomo_Chr25	endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
1022	O_BomoIG100920_5prime_partial:A_BomoIG_DN30750_c1_g1_i14 125bp	Bomo_Chr11	olfactory_receptor_[Bombyx_mori]
1023	O_BomoIG100921_complete:A_BomoIG_DN30750_c1_g1_i16 287bp	Bomo_Chr11	endoribonuclease_Dcr-1_[Danaus_plexippus_plexippus]	GO:0000166 F nucleotide binding GO:0003723 F RNA binding GO:0003725 F double-stranded RNA binding GO:0003727 F single-stranded RNA binding GO:0004386 F helicase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0004525 F ribonuclease III activity GO:0004530 F deoxyribonuclease I activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006309 P apoptotic DNA fragmentation GO:0006396 P RNA processing GO:0007279 P pole cell formation GO:0007294 P germarium-derived oocyte fate determination GO:0007367 P segment polarity determination GO:0016246 P RNA interference GO:0016442 C RISC complex GO:0016443 F bidentate ribonuclease III activity GO:0016787 F hydrolase activity GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters GO:0030422 P production of siRNA involved in RNA interference GO:0030727 P germarium-derived female germ-line cyst formation GO:0031047 P gene silencing by RNA GO:0031054 P pre-miRNA processing GO:0033227 P dsRNA transport GO:0035087 P siRNA loading onto RISC involved in RNA interference GO:0035196 P production of miRNAs involved in gene silencing by miRNA GO:0042078 P germ-line stem cell division GO:0042594 P response to starvation GO:0045448 P mitotic cell cycle, embryonic GO:0046872 F metal ion binding GO:0048813 P dendrite morphogenesis GO:0070883 F pre-miRNA binding GO:0090501 P RNA phosphodiester bond hydrolysis GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1024	O_BomoIG100922_5prime_partial:A_BomoIG_DN30750_c1_g1_i16 125bp	Bomo_Chr11	olfactory_receptor_[Bombyx_mori]
1025	O_BomoIG100923_complete:A_BomoIG_DN30750_c1_g1_i18 287bp	Bomo_Chr11	endoribonuclease_Dcr-1_[Danaus_plexippus_plexippus]	GO:0000166 F nucleotide binding GO:0003723 F RNA binding GO:0003725 F double-stranded RNA binding GO:0003727 F single-stranded RNA binding GO:0004386 F helicase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0004525 F ribonuclease III activity GO:0004530 F deoxyribonuclease I activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006309 P apoptotic DNA fragmentation GO:0006396 P RNA processing GO:0007279 P pole cell formation GO:0007294 P germarium-derived oocyte fate determination GO:0007367 P segment polarity determination GO:0016246 P RNA interference GO:0016442 C RISC complex GO:0016443 F bidentate ribonuclease III activity GO:0016787 F hydrolase activity GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters GO:0030422 P production of siRNA involved in RNA interference GO:0030727 P germarium-derived female germ-line cyst formation GO:0031047 P gene silencing by RNA GO:0031054 P pre-miRNA processing GO:0033227 P dsRNA transport GO:0035087 P siRNA loading onto RISC involved in RNA interference GO:0035196 P production of miRNAs involved in gene silencing by miRNA GO:0042078 P germ-line stem cell division GO:0042594 P response to starvation GO:0045448 P mitotic cell cycle, embryonic GO:0046872 F metal ion binding GO:0048813 P dendrite morphogenesis GO:0070883 F pre-miRNA binding GO:0090501 P RNA phosphodiester bond hydrolysis GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1026	O_BomoIG100924_5prime_partial:A_BomoIG_DN30750_c1_g1_i18 125bp	Bomo_Chr11	olfactory_receptor_[Bombyx_mori]
1027	O_BomoIG100925_complete:A_BomoIG_DN30750_c1_g1_i19 233bp	Bomo_Chr11	LOW_QUALITY_PROTEIN:_endoribonuclease_Dcr-1-like,_partial_[Helicoverpa_armigera]
1028	O_BomoIG100926_complete:A_BomoIG_DN30750_c1_g1_i19 169bp	Bomo_Chr11
1029	O_BomoIG100927_5prime_partial:A_BomoIG_DN30750_c1_g1_i20 608bp	Bomo_Chr11	PREDICTED:_endoribonuclease_Dcr-1_[Papilio_polytes]	GO:0000166 F nucleotide binding GO:0003723 F RNA binding GO:0003725 F double-stranded RNA binding GO:0003727 F single-stranded RNA binding GO:0004386 F helicase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0004525 F ribonuclease III activity GO:0004530 F deoxyribonuclease I activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006309 P apoptotic DNA fragmentation GO:0006396 P RNA processing GO:0007279 P pole cell formation GO:0007294 P germarium-derived oocyte fate determination GO:0007367 P segment polarity determination GO:0016246 P RNA interference GO:0016442 C RISC complex GO:0016443 F bidentate ribonuclease III activity GO:0016787 F hydrolase activity GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters GO:0030422 P production of siRNA involved in RNA interference GO:0030727 P germarium-derived female germ-line cyst formation GO:0031047 P gene silencing by RNA GO:0031054 P pre-miRNA processing GO:0033227 P dsRNA transport GO:0035087 P siRNA loading onto RISC involved in RNA interference GO:0035196 P production of miRNAs involved in gene silencing by miRNA GO:0042078 P germ-line stem cell division GO:0042594 P response to starvation GO:0045448 P mitotic cell cycle, embryonic GO:0046872 F metal ion binding GO:0048813 P dendrite morphogenesis GO:0070883 F pre-miRNA binding GO:0090501 P RNA phosphodiester bond hydrolysis GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1030	O_BomoIG100928_complete:A_BomoIG_DN30750_c1_g1_i20 172bp	Bomo_Chr11
1031	O_BomoIG100929_complete:A_BomoIG_DN30750_c1_g1_i20 161bp	Bomo_Chr11
1032	O_BomoIG10092_internal:A_BomoIG_DN33756_c2_g1_i7 292bp	Bomo_Chr9	endonuclease_and_reverse_transcriptase-like_protein_[Bombyx_mori]
1033	O_BomoIG100930_complete:A_BomoIG_DN30750_c1_g1_i21 305bp	Bomo_Chr11	PREDICTED:_endoribonuclease_Dcr-1_[Amyelois_transitella]	GO:0000166 F nucleotide binding GO:0003723 F RNA binding GO:0003725 F double-stranded RNA binding GO:0003727 F single-stranded RNA binding GO:0004386 F helicase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0004525 F ribonuclease III activity GO:0004530 F deoxyribonuclease I activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006309 P apoptotic DNA fragmentation GO:0006396 P RNA processing GO:0007279 P pole cell formation GO:0007294 P germarium-derived oocyte fate determination GO:0007367 P segment polarity determination GO:0016246 P RNA interference GO:0016442 C RISC complex GO:0016443 F bidentate ribonuclease III activity GO:0016787 F hydrolase activity GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters GO:0030422 P production of siRNA involved in RNA interference GO:0030727 P germarium-derived female germ-line cyst formation GO:0031047 P gene silencing by RNA GO:0031054 P pre-miRNA processing GO:0033227 P dsRNA transport GO:0035087 P siRNA loading onto RISC involved in RNA interference GO:0035196 P production of miRNAs involved in gene silencing by miRNA GO:0042078 P germ-line stem cell division GO:0042594 P response to starvation GO:0045448 P mitotic cell cycle, embryonic GO:0046872 F metal ion binding GO:0048813 P dendrite morphogenesis GO:0070883 F pre-miRNA binding GO:0090501 P RNA phosphodiester bond hydrolysis GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1034	O_BomoIG100931_5prime_partial:A_BomoIG_DN30750_c1_g1_i22 787bp	Bomo_Chr11	PREDICTED:_endoribonuclease_Dcr-1_[Papilio_polytes]	GO:0000166 F nucleotide binding GO:0003723 F RNA binding GO:0003725 F double-stranded RNA binding GO:0003727 F single-stranded RNA binding GO:0004386 F helicase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0004525 F ribonuclease III activity GO:0004530 F deoxyribonuclease I activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006309 P apoptotic DNA fragmentation GO:0006396 P RNA processing GO:0007279 P pole cell formation GO:0007294 P germarium-derived oocyte fate determination GO:0007367 P segment polarity determination GO:0016246 P RNA interference GO:0016442 C RISC complex GO:0016443 F bidentate ribonuclease III activity GO:0016787 F hydrolase activity GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters GO:0030422 P production of siRNA involved in RNA interference GO:0030727 P germarium-derived female germ-line cyst formation GO:0031047 P gene silencing by RNA GO:0031054 P pre-miRNA processing GO:0033227 P dsRNA transport GO:0035087 P siRNA loading onto RISC involved in RNA interference GO:0035196 P production of miRNAs involved in gene silencing by miRNA GO:0042078 P germ-line stem cell division GO:0042594 P response to starvation GO:0045448 P mitotic cell cycle, embryonic GO:0046872 F metal ion binding GO:0048813 P dendrite morphogenesis GO:0070883 F pre-miRNA binding GO:0090501 P RNA phosphodiester bond hydrolysis GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1035	O_BomoIG100932_complete:A_BomoIG_DN30750_c1_g1_i22 172bp	Bomo_Chr11
1036	O_BomoIG100933_complete:A_BomoIG_DN30750_c1_g1_i22 161bp	Bomo_Chr11
1037	O_BomoIG100934_complete:A_BomoIG_DN30750_c1_g1_i23 374bp	Bomo_Chr11	PREDICTED:_endoribonuclease_Dcr-1-like_isoform_X1_[Papilio_machaon]	GO:0000166 F nucleotide binding GO:0003723 F RNA binding GO:0003725 F double-stranded RNA binding GO:0003727 F single-stranded RNA binding GO:0004386 F helicase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0004525 F ribonuclease III activity GO:0004530 F deoxyribonuclease I activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006309 P apoptotic DNA fragmentation GO:0006396 P RNA processing GO:0007279 P pole cell formation GO:0007294 P germarium-derived oocyte fate determination GO:0007367 P segment polarity determination GO:0016246 P RNA interference GO:0016442 C RISC complex GO:0016443 F bidentate ribonuclease III activity GO:0016787 F hydrolase activity GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters GO:0030422 P production of siRNA involved in RNA interference GO:0030727 P germarium-derived female germ-line cyst formation GO:0031047 P gene silencing by RNA GO:0031054 P pre-miRNA processing GO:0033227 P dsRNA transport GO:0035087 P siRNA loading onto RISC involved in RNA interference GO:0035196 P production of miRNAs involved in gene silencing by miRNA GO:0042078 P germ-line stem cell division GO:0042594 P response to starvation GO:0045448 P mitotic cell cycle, embryonic GO:0046872 F metal ion binding GO:0048813 P dendrite morphogenesis GO:0070883 F pre-miRNA binding GO:0090501 P RNA phosphodiester bond hydrolysis GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1038	O_BomoIG100935_5prime_partial:A_BomoIG_DN30750_c1_g1_i24 1109bp	Bomo_Chr11	PREDICTED:_endoribonuclease_Dcr-1_[Papilio_polytes]	GO:0000166 F nucleotide binding GO:0003723 F RNA binding GO:0003725 F double-stranded RNA binding GO:0003727 F single-stranded RNA binding GO:0004386 F helicase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0004525 F ribonuclease III activity GO:0004530 F deoxyribonuclease I activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006309 P apoptotic DNA fragmentation GO:0006396 P RNA processing GO:0007279 P pole cell formation GO:0007294 P germarium-derived oocyte fate determination GO:0007367 P segment polarity determination GO:0016246 P RNA interference GO:0016442 C RISC complex GO:0016443 F bidentate ribonuclease III activity GO:0016787 F hydrolase activity GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters GO:0030422 P production of siRNA involved in RNA interference GO:0030727 P germarium-derived female germ-line cyst formation GO:0031047 P gene silencing by RNA GO:0031054 P pre-miRNA processing GO:0033227 P dsRNA transport GO:0035087 P siRNA loading onto RISC involved in RNA interference GO:0035196 P production of miRNAs involved in gene silencing by miRNA GO:0042078 P germ-line stem cell division GO:0042594 P response to starvation GO:0045448 P mitotic cell cycle, embryonic GO:0046872 F metal ion binding GO:0048813 P dendrite morphogenesis GO:0070883 F pre-miRNA binding GO:0090501 P RNA phosphodiester bond hydrolysis GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1039	O_BomoIG100936_complete:A_BomoIG_DN30750_c1_g1_i24 519bp	Bomo_Chr11
1040	O_BomoIG100937_complete:A_BomoIG_DN30750_c1_g1_i24 172bp	Bomo_Chr11
1041	O_BomoIG100938_complete:A_BomoIG_DN30750_c1_g1_i24 161bp	Bomo_Chr11
1042	O_BomoIG100939_5prime_partial:A_BomoIG_DN30750_c1_g1_i25 519bp	Bomo_Chr11	PREDICTED:_endoribonuclease_Dcr-1_[Papilio_polytes]	GO:0000166 F nucleotide binding GO:0003723 F RNA binding GO:0003725 F double-stranded RNA binding GO:0003727 F single-stranded RNA binding GO:0004386 F helicase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0004525 F ribonuclease III activity GO:0004530 F deoxyribonuclease I activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006309 P apoptotic DNA fragmentation GO:0006396 P RNA processing GO:0007279 P pole cell formation GO:0007294 P germarium-derived oocyte fate determination GO:0007367 P segment polarity determination GO:0016246 P RNA interference GO:0016442 C RISC complex GO:0016443 F bidentate ribonuclease III activity GO:0016787 F hydrolase activity GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters GO:0030422 P production of siRNA involved in RNA interference GO:0030727 P germarium-derived female germ-line cyst formation GO:0031047 P gene silencing by RNA GO:0031054 P pre-miRNA processing GO:0033227 P dsRNA transport GO:0035087 P siRNA loading onto RISC involved in RNA interference GO:0035196 P production of miRNAs involved in gene silencing by miRNA GO:0042078 P germ-line stem cell division GO:0042594 P response to starvation GO:0045448 P mitotic cell cycle, embryonic GO:0046872 F metal ion binding GO:0048813 P dendrite morphogenesis GO:0070883 F pre-miRNA binding GO:0090501 P RNA phosphodiester bond hydrolysis GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1043	O_BomoIG10093_complete:A_BomoIG_DN33756_c2_g1_i7 118bp	Bomo_Chr9
1044	O_BomoIG100940_3prime_partial:A_BomoIG_DN30750_c1_g1_i25 173bp	Bomo_Chr11
1045	O_BomoIG100941_complete:A_BomoIG_DN30750_c1_g1_i26 561bp	Bomo_Chr11	PREDICTED:_endoribonuclease_Dcr-1_[Papilio_polytes]	GO:0000166 F nucleotide binding GO:0003723 F RNA binding GO:0003725 F double-stranded RNA binding GO:0003727 F single-stranded RNA binding GO:0004386 F helicase activity GO:0004518 F nuclease activity GO:0004519 F endonuclease activity GO:0004525 F ribonuclease III activity GO:0004530 F deoxyribonuclease I activity GO:0005515 F protein binding GO:0005524 F ATP binding GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0006309 P apoptotic DNA fragmentation GO:0006396 P RNA processing GO:0007279 P pole cell formation GO:0007294 P germarium-derived oocyte fate determination GO:0007367 P segment polarity determination GO:0016246 P RNA interference GO:0016442 C RISC complex GO:0016443 F bidentate ribonuclease III activity GO:0016787 F hydrolase activity GO:0016891 F endoribonuclease activity, producing 5'-phosphomonoesters GO:0030422 P production of siRNA involved in RNA interference GO:0030727 P germarium-derived female germ-line cyst formation GO:0031047 P gene silencing by RNA GO:0031054 P pre-miRNA processing GO:0033227 P dsRNA transport GO:0035087 P siRNA loading onto RISC involved in RNA interference GO:0035196 P production of miRNAs involved in gene silencing by miRNA GO:0042078 P germ-line stem cell division GO:0042594 P response to starvation GO:0045448 P mitotic cell cycle, embryonic GO:0046872 F metal ion binding GO:0048813 P dendrite morphogenesis GO:0070883 F pre-miRNA binding GO:0090501 P RNA phosphodiester bond hydrolysis GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
1046	O_BomoIG100942_5prime_partial:A_BomoIG_DN30750_c1_g1_i26 125bp	Bomo_Chr11	olfactory_receptor_[Bombyx_mori]
1047	O_BomoIG100943_complete:A_BomoIG_DN30795_c6_g1_i1 352bp	Bomo_Chr11	gelsolin_[Bombyx_mori]	GO:0003779 F actin binding GO:0005509 F calcium ion binding GO:0005576 C extracellular region GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0005856 C cytoskeleton GO:0005884 C actin filament GO:0006909 P phagocytosis GO:0030041 P actin filament polymerization GO:0045010 P actin nucleation GO:0046872 F metal ion binding GO:0051014 P actin filament severing GO:0051016 P barbed-end actin filament capping
1048	O_BomoIG100944_3prime_partial:A_BomoIG_DN30795_c6_g4_i1 126bp	Bomo_Chr10	PREDICTED:_DPH4_homolog_[Amyelois_transitella]	GO:0001671 F ATPase activator activity GO:0005737 C cytoplasm GO:0005856 C cytoskeleton GO:0008198 F ferrous iron binding GO:0008270 F zinc ion binding GO:0017183 P peptidyl-diphthamide biosynthetic process from peptidyl-histidine GO:0032781 P positive regulation of ATP-dependent activity GO:0046872 F metal ion binding GO:0055114 P obsolete oxidation-reduction process
1049	O_BomoIG100945_5prime_partial:A_BomoIG_DN30795_c6_g9_i1 151bp	Bomo_Chr19
1050	O_BomoIG100946_5prime_partial:A_BomoIG_DN30795_c6_g9_i1 135bp	Bomo_Chr19	enhancer_of_mRNA-decapping_protein_3_[Bombyx_mori]	GO:0000932 C P-body GO:0003723 F RNA binding GO:0005737 C cytoplasm