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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2191 O_BomoBR101973_complete:A_BomoBR_DN29829_c0_g10_i1
112bp
2192 O_BomoBR101974_complete:A_BomoBR_DN29829_c0_g10_i1
107bp
2193 O_BomoBR101975_complete:A_BomoBR_DN29829_c0_g2_i16
893bp
 F-box_only_protein_11_isoform_X2_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0007605 P sensory perception of sound
GO:0008270 F zinc ion binding
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016567 P protein ubiquitination
GO:0035246 P peptidyl-arginine N-methylation
GO:0046872 F metal ion binding
2194 O_BomoBR101976_complete:A_BomoBR_DN29829_c0_g2_i16
128bp
2195 O_BomoBR101977_5prime_partial:A_BomoBR_DN29829_c0_g1_i6
592bp
 brefeldin_A-inhibited_guanine_nucleotide-exchange_protein_3_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0010923 P negative regulation of phosphatase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030133 C transport vesicle
GO:0030658 C transport vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
2196 O_BomoBR101978_complete:A_BomoBR_DN29829_c0_g1_i6
100bp
2197 O_BomoBR101979_complete:A_BomoBR_DN29829_c0_g7_i5
441bp
 synaptotagmin-4_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0001786 F phosphatidylserine binding
GO:0005509 F calcium ion binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006887 P exocytosis
GO:0006906 P vesicle fusion
GO:0007269 P neurotransmitter secretion
GO:0007420 P brain development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017158 P regulation of calcium ion-dependent exocytosis
GO:0019905 F syntaxin binding
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030672 C synaptic vesicle membrane
GO:0031045 C dense core granule
GO:0031339 P negative regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0043005 C neuron projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0045202 C synapse
GO:0045955 P negative regulation of calcium ion-dependent exocytosis
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048489 P synaptic vesicle transport
GO:0048791 P calcium ion-regulated exocytosis of neurotransmitter
GO:1903861 P positive regulation of dendrite extension
2198 O_BomoBR10197_complete:A_BomoBR_DN31374_c5_g1_i2
103bp
2199 O_BomoBR101980_complete:A_BomoBR_DN29829_c0_g7_i5
102bp
2200 O_BomoBR101981_complete:A_BomoBR_DN29829_c0_g7_i6
413bp
 synaptotagmin-4_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0001786 F phosphatidylserine binding
GO:0005509 F calcium ion binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006887 P exocytosis
GO:0006906 P vesicle fusion
GO:0007269 P neurotransmitter secretion
GO:0007420 P brain development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017158 P regulation of calcium ion-dependent exocytosis
GO:0019905 F syntaxin binding
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030672 C synaptic vesicle membrane
GO:0031045 C dense core granule
GO:0031339 P negative regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0043005 C neuron projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0045202 C synapse
GO:0045955 P negative regulation of calcium ion-dependent exocytosis
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048489 P synaptic vesicle transport
GO:0048791 P calcium ion-regulated exocytosis of neurotransmitter
GO:1903861 P positive regulation of dendrite extension
2201 O_BomoBR101982_complete:A_BomoBR_DN29829_c0_g7_i6
102bp
2202 O_BomoBR101983_complete:A_BomoBR_DN29829_c0_g2_i17
645bp
 F-box_only_protein_11_isoform_X2_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0007605 P sensory perception of sound
GO:0008270 F zinc ion binding
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016567 P protein ubiquitination
GO:0035246 P peptidyl-arginine N-methylation
GO:0046872 F metal ion binding
2203 O_BomoBR101984_complete:A_BomoBR_DN29829_c0_g2_i17
220bp
 F-box_only_protein_11_isoform_X2_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0007605 P sensory perception of sound
GO:0008270 F zinc ion binding
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016567 P protein ubiquitination
GO:0035246 P peptidyl-arginine N-methylation
GO:0046872 F metal ion binding
2204 O_BomoBR101985_3prime_partial:A_BomoBR_DN29829_c0_g10_i3
695bp
 prestin_isoform_X2_[Bombyx_mori]
GO:0002931 P response to ischemia
GO:0005254 F chloride channel activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007605 P sensory perception of sound
GO:0008134 F transcription factor binding
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008360 P regulation of cell shape
GO:0009751 P response to salicylic acid
GO:0010996 P response to auditory stimulus
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0015755 P fructose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0030507 F spectrin binding
GO:0034220 P ion transmembrane transport
GO:0034766 P negative regulation of ion transmembrane transport
GO:0035864 P response to potassium ion
GO:0042391 P regulation of membrane potential
GO:0042493 P response to xenobiotic stimulus
GO:0042803 F protein homodimerization activity
GO:0045793 P positive regulation of cell size
GO:0051262 P protein tetramerization
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0090102 P cochlea development
GO:0097066 P response to thyroid hormone
GO:0098656 P anion transmembrane transport
GO:1902074 P response to salt
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
GO:2000147 P positive regulation of cell motility
2205 O_BomoBR101986_complete:A_BomoBR_DN29829_c0_g10_i3
112bp
2206 O_BomoBR101987_complete:A_BomoBR_DN29829_c0_g10_i3
107bp
2207 O_BomoBR101988_complete:A_BomoBR_DN29829_c0_g1_i7
582bp
 brefeldin_A-inhibited_guanine_nucleotide-exchange_protein_3_isoform_X1_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005086 F guanyl-nucleotide exchange factor activity
GO:0005737 C cytoplasm
GO:0010923 P negative regulation of phosphatase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030133 C transport vesicle
GO:0030658 C transport vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032012 P regulation of ARF protein signal transduction
GO:0043547 P positive regulation of GTPase activity
2208 O_BomoBR101989_complete:A_BomoBR_DN29829_c0_g1_i7
100bp
2209 O_BomoBR10198_complete:A_BomoBR_DN31374_c5_g2_i2
617bp
 aubergine_protein_[Bombyx_mori]
GO:0000335 P negative regulation of transposition, DNA-mediated
GO:0000785 C chromatin
GO:0000791 C euchromatin
GO:0001709 P cell fate determination
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006342 P heterochromatin assembly
GO:0007275 P multicellular organism development
GO:0007279 P pole cell formation
GO:0010369 C chromocenter
GO:0010529 P negative regulation of transposition
GO:0016246 P RNA interference
GO:0016441 P posttranscriptional gene silencing
GO:0030718 P germ-line stem cell population maintenance
GO:0031047 P gene silencing by RNA
GO:0031933 C obsolete telomeric heterochromatin
GO:0042078 P germ-line stem cell division
GO:0048132 P female germ-line stem cell asymmetric division
GO:0048133 P male germ-line stem cell asymmetric division
GO:0060213 P positive regulation of nuclear-transcribed mRNA poly(A) tail shortening
GO:0070725 C Yb body
GO:0070868 P obsolete heterochromatin organization involved in chromatin silencing
GO:0090309 P positive regulation of DNA methylation-dependent heterochromatin assembly
2210 O_BomoBR101990_complete:A_BomoBR_DN29829_c0_g10_i4
697bp
 prestin_isoform_X2_[Bombyx_mori]
GO:0002931 P response to ischemia
GO:0005254 F chloride channel activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007605 P sensory perception of sound
GO:0008134 F transcription factor binding
GO:0008271 F secondary active sulfate transmembrane transporter activity
GO:0008272 P sulfate transport
GO:0008360 P regulation of cell shape
GO:0009751 P response to salicylic acid
GO:0010996 P response to auditory stimulus
GO:0015106 F bicarbonate transmembrane transporter activity
GO:0015116 F sulfate transmembrane transporter activity
GO:0015301 F anion:anion antiporter activity
GO:0015701 P bicarbonate transport
GO:0015755 P fructose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016323 C basolateral plasma membrane
GO:0016328 C lateral plasma membrane
GO:0019531 F oxalate transmembrane transporter activity
GO:0019532 P oxalate transport
GO:0030507 F spectrin binding
GO:0034220 P ion transmembrane transport
GO:0034766 P negative regulation of ion transmembrane transport
GO:0035864 P response to potassium ion
GO:0042391 P regulation of membrane potential
GO:0042493 P response to xenobiotic stimulus
GO:0042803 F protein homodimerization activity
GO:0045793 P positive regulation of cell size
GO:0051262 P protein tetramerization
GO:0051453 P regulation of intracellular pH
GO:0055085 P transmembrane transport
GO:0090102 P cochlea development
GO:0097066 P response to thyroid hormone
GO:0098656 P anion transmembrane transport
GO:1902074 P response to salt
GO:1902358 P sulfate transmembrane transport
GO:1902476 P chloride transmembrane transport
GO:2000147 P positive regulation of cell motility
2211 O_BomoBR101991_complete:A_BomoBR_DN29829_c0_g10_i4
112bp
2212 O_BomoBR101992_complete:A_BomoBR_DN29829_c0_g10_i4
107bp
2213 O_BomoBR101993_complete:A_BomoBR_DN29829_c0_g2_i18
607bp
 F-box_only_protein_11_isoform_X2_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0007605 P sensory perception of sound
GO:0008270 F zinc ion binding
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016567 P protein ubiquitination
GO:0035246 P peptidyl-arginine N-methylation
GO:0046872 F metal ion binding
2214 O_BomoBR101994_complete:A_BomoBR_DN29829_c0_g2_i18
220bp
 F-box_only_protein_11_isoform_X2_[Bombyx_mori]
GO:0000151 C ubiquitin ligase complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006464 P cellular protein modification process
GO:0007605 P sensory perception of sound
GO:0008270 F zinc ion binding
GO:0016274 F protein-arginine N-methyltransferase activity
GO:0016567 P protein ubiquitination
GO:0035246 P peptidyl-arginine N-methylation
GO:0046872 F metal ion binding
2215 O_BomoBR101995_complete:A_BomoBR_DN29829_c0_g2_i18
128bp
2216 O_BomoBR101996_complete:A_BomoBR_DN29829_c0_g7_i7
171bp
 synaptotagmin-4_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0001786 F phosphatidylserine binding
GO:0005509 F calcium ion binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0006887 P exocytosis
GO:0006906 P vesicle fusion
GO:0007269 P neurotransmitter secretion
GO:0007420 P brain development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017158 P regulation of calcium ion-dependent exocytosis
GO:0019905 F syntaxin binding
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030672 C synaptic vesicle membrane
GO:0031045 C dense core granule
GO:0031339 P negative regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0043005 C neuron projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0045202 C synapse
GO:0045955 P negative regulation of calcium ion-dependent exocytosis
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048489 P synaptic vesicle transport
GO:0048791 P calcium ion-regulated exocytosis of neurotransmitter
GO:1903861 P positive regulation of dendrite extension
2217 O_BomoBR101997_internal:A_BomoBR_DN29829_c0_g12_i1
130bp
 lipase_1_precursor_[Danaus_plexippus_plexippus]
GO:0006629 P lipid metabolic process
GO:0016042 P lipid catabolic process
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
2218 O_BomoBR101998_complete:A_BomoBR_DN29829_c0_g7_i8
384bp
 synaptotagmin-4_[Bombyx_mori]
GO:0000149 F SNARE binding
GO:0001786 F phosphatidylserine binding
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005544 F calcium-dependent phospholipid binding
GO:0005886 C plasma membrane
GO:0006887 P exocytosis
GO:0006906 P vesicle fusion
GO:0007269 P neurotransmitter secretion
GO:0007420 P brain development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0017158 P regulation of calcium ion-dependent exocytosis
GO:0019905 F syntaxin binding
GO:0030054 C cell junction
GO:0030154 P cell differentiation
GO:0030276 F clathrin binding
GO:0030672 C synaptic vesicle membrane
GO:0031045 C dense core granule
GO:0031339 P negative regulation of vesicle fusion
GO:0031410 C cytoplasmic vesicle
GO:0043005 C neuron projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0045202 C synapse
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048791 P calcium ion-regulated exocytosis of neurotransmitter
GO:1903861 P positive regulation of dendrite extension
2219 O_BomoBR101999_complete:A_BomoBR_DN29829_c0_g7_i8
102bp
2220 O_BomoBR10199_complete:A_BomoBR_DN31374_c5_g2_i2
128bp
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