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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2101 O_BomoBR101892_complete:A_BomoBR_DN29887_c4_g2_i9
218bp
 methuselah-like_protein_10_[Bombyx_mori]
GO:0004871 F obsolete signal transducer activity
GO:0004888 F transmembrane signaling receptor activity
GO:0004930 F G protein-coupled receptor activity
GO:0005886 C plasma membrane
GO:0006950 P response to stress
GO:0007165 P signal transduction
GO:0007166 P cell surface receptor signaling pathway
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0016020 C membrane
GO:0016021 C integral component of membrane
2102 O_BomoBR101893_5prime_partial:A_BomoBR_DN29860_c2_g1_i1
200bp
 uncharacterized_protein_LOC101737841_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0006084 P acetyl-CoA metabolic process
GO:0016740 F transferase activity
2103 O_BomoBR101894_3prime_partial:A_BomoBR_DN29860_c2_g1_i1
150bp
 hypothetical_protein_BVI061214_00334_[Thermus_aquaticus]
2104 O_BomoBR101895_complete:A_BomoBR_DN29860_c2_g1_i2
150bp
 uncharacterized_protein_LOC101737841_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0006084 P acetyl-CoA metabolic process
GO:0016740 F transferase activity
2105 O_BomoBR101896_complete:A_BomoBR_DN29860_c2_g1_i2
122bp
2106 O_BomoBR101897_complete:A_BomoBR_DN29860_c2_g1_i3
150bp
 uncharacterized_protein_LOC101737841_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0006084 P acetyl-CoA metabolic process
GO:0016740 F transferase activity
2107 O_BomoBR101898_complete:A_BomoBR_DN29860_c2_g1_i3
145bp
 hypothetical_protein_BVI061214_00334_[Thermus_aquaticus]
2108 O_BomoBR101899_complete:A_BomoBR_DN29860_c3_g1_i2
271bp
 glucosamine-6-phosphate_isomerase_2_isoform_X2_[Bombyx_mori]
GO:0004342 F glucosamine-6-phosphate deaminase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006044 P N-acetylglucosamine metabolic process
GO:0016787 F hydrolase activity
2109 O_BomoBR10189_complete:A_BomoBR_DN31340_c2_g3_i2
114bp
 polymerase_delta_interacting_protein_3_[Bombyx_mori]
2110 O_BomoBR1018_complete:A_BomoBR_DN30295_c0_g1_i19
108bp
2111 O_BomoBR101900_complete:A_BomoBR_DN29860_c3_g1_i2
119bp
 Uncharacterised_protein_[Shigella_sonnei]
2112 O_BomoBR101901_complete:A_BomoBR_DN29860_c3_g1_i2
103bp
2113 O_BomoBR101902_complete:A_BomoBR_DN29860_c3_g1_i5
279bp
 glucosamine-6-phosphate_isomerase_isoform_X1_[Bombyx_mori]
GO:0004342 F glucosamine-6-phosphate deaminase activity
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0006044 P N-acetylglucosamine metabolic process
GO:0016787 F hydrolase activity
2114 O_BomoBR101903_complete:A_BomoBR_DN29860_c3_g1_i5
119bp
 Uncharacterised_protein_[Shigella_sonnei]
2115 O_BomoBR101904_complete:A_BomoBR_DN29860_c3_g1_i5
103bp
2116 O_BomoBR101905_complete:A_BomoBR_DN29860_c4_g5_i1
363bp
 zinc_finger_protein_235_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2117 O_BomoBR101906_complete:A_BomoBR_DN29860_c4_g5_i1
165bp
2118 O_BomoBR101907_complete:A_BomoBR_DN29860_c4_g5_i2
331bp
 zinc_finger_protein_235_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2119 O_BomoBR101908_complete:A_BomoBR_DN29860_c4_g5_i2
165bp
2120 O_BomoBR101909_complete:A_BomoBR_DN29860_c4_g5_i3
412bp
 zinc_finger_protein_235_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2121 O_BomoBR10190_complete:A_BomoBR_DN31340_c2_g3_i3
366bp
 polymerase_delta_interacting_protein_3_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000346 C transcription export complex
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006369 P termination of RNA polymerase II transcription
GO:0006405 P RNA export from nucleus
GO:0006406 P mRNA export from nucleus
GO:0006417 P regulation of translation
GO:0006810 P transport
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0031124 P mRNA 3'-end processing
GO:0035145 C exon-exon junction complex
GO:0043231 C intracellular membrane-bounded organelle
GO:0044822 F RNA binding
GO:0045727 P positive regulation of translation
GO:0051028 P mRNA transport
2122 O_BomoBR101910_complete:A_BomoBR_DN29860_c4_g5_i3
165bp
2123 O_BomoBR101911_complete:A_BomoBR_DN29860_c4_g5_i4
412bp
 zinc_finger_protein_235_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2124 O_BomoBR101912_complete:A_BomoBR_DN29860_c4_g5_i4
165bp
2125 O_BomoBR101913_3prime_partial:A_BomoBR_DN29879_c0_g1_i1
118bp
 PREDICTED:_uncharacterized_protein_LOC106717337_[Papilio_machaon]
2126 O_BomoBR101914_3prime_partial:A_BomoBR_DN29879_c0_g1_i2
123bp
 PREDICTED:_uncharacterized_protein_LOC106717337_[Papilio_machaon]
2127 O_BomoBR101915_3prime_partial:A_BomoBR_DN29879_c0_g1_i3
117bp
 PREDICTED:_uncharacterized_protein_LOC106717337_[Papilio_machaon]
2128 O_BomoBR101916_3prime_partial:A_BomoBR_DN29879_c0_g1_i4
123bp
 PREDICTED:_uncharacterized_protein_LOC106717337_[Papilio_machaon]
2129 O_BomoBR101917_3prime_partial:A_BomoBR_DN29879_c0_g1_i6
123bp
 PREDICTED:_uncharacterized_protein_LOC106717337_[Papilio_machaon]
2130 O_BomoBR101918_complete:A_BomoBR_DN29879_c0_g1_i7
556bp
 uncharacterized_protein_LOC101740889_[Bombyx_mori]
GO:0005515 F protein binding
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
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