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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
1531 O_BomoBR101379_complete:A_BomoBR_DN29865_c0_g1_i16
128bp
 RNA-binding_protein_1_[Bombyx_mori]
1532 O_BomoBR10137_complete:A_BomoBR_DN31333_c3_g2_i3
109bp
1533 O_BomoBR101380_complete:A_BomoBR_DN29865_c0_g1_i17
212bp
 UDP-xylose_and_UDP-N-acetylglucosamine_transporter_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005457 F GDP-fucose transmembrane transporter activity
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 F UDP-xylose transmembrane transporter activity
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015783 P GDP-fucose transmembrane transport
GO:0015790 P UDP-xylose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030173 C integral component of Golgi membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0055085 P transmembrane transport
GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
1534 O_BomoBR101381_complete:A_BomoBR_DN29865_c0_g1_i17
157bp
 RNA-binding_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035327 C euchromatin
GO:0045292 P mRNA cis splicing, via spliceosome
1535 O_BomoBR101382_complete:A_BomoBR_DN29865_c0_g1_i18
160bp
 RNA-binding_protein_1_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035327 C euchromatin
GO:0045292 P mRNA cis splicing, via spliceosome
1536 O_BomoBR101383_complete:A_BomoBR_DN29865_c0_g1_i19
209bp
 UDP-xylose_and_UDP-N-acetylglucosamine_transporter_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005457 F GDP-fucose transmembrane transporter activity
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 F UDP-xylose transmembrane transporter activity
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015783 P GDP-fucose transmembrane transport
GO:0015790 P UDP-xylose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030173 C integral component of Golgi membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0055085 P transmembrane transport
GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
1537 O_BomoBR101384_complete:A_BomoBR_DN29865_c0_g1_i19
128bp
 RNA-binding_protein_1_[Bombyx_mori]
1538 O_BomoBR101385_complete:A_BomoBR_DN29865_c0_g1_i19
124bp
 UDP-xylose_and_UDP-N-acetylglucosamine_transporter_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005457 F GDP-fucose transmembrane transporter activity
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 F UDP-xylose transmembrane transporter activity
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006111 P regulation of gluconeogenesis
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015783 P GDP-fucose transmembrane transport
GO:0015788 P UDP-N-acetylglucosamine transmembrane transport
GO:0015790 P UDP-xylose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030173 C integral component of Golgi membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0055085 P transmembrane transport
GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
1539 O_BomoBR101386_complete:A_BomoBR_DN29865_c0_g1_i20
157bp
 RNA-binding_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035327 C euchromatin
GO:0045292 P mRNA cis splicing, via spliceosome
1540 O_BomoBR101387_complete:A_BomoBR_DN29865_c0_g1_i21
157bp
 RNA-binding_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035327 C euchromatin
GO:0045292 P mRNA cis splicing, via spliceosome
1541 O_BomoBR101388_complete:A_BomoBR_DN29865_c0_g1_i21
124bp
 UDP-xylose_and_UDP-N-acetylglucosamine_transporter_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005457 F GDP-fucose transmembrane transporter activity
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 F UDP-xylose transmembrane transporter activity
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006111 P regulation of gluconeogenesis
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015783 P GDP-fucose transmembrane transport
GO:0015788 P UDP-N-acetylglucosamine transmembrane transport
GO:0015790 P UDP-xylose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030173 C integral component of Golgi membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0055085 P transmembrane transport
GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
1542 O_BomoBR101389_complete:A_BomoBR_DN29865_c0_g1_i21
116bp
 UDP-xylose_and_UDP-N-acetylglucosamine_transporter_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005457 F GDP-fucose transmembrane transporter activity
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 F UDP-xylose transmembrane transporter activity
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015783 P GDP-fucose transmembrane transport
GO:0015790 P UDP-xylose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030173 C integral component of Golgi membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0055085 P transmembrane transport
GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
1543 O_BomoBR10138_3prime_partial:A_BomoBR_DN31333_c3_g1_i4
971bp
 titin_isoform_X1_[Bombyx_mori]
1544 O_BomoBR101390_complete:A_BomoBR_DN29865_c0_g1_i22
209bp
 UDP-xylose_and_UDP-N-acetylglucosamine_transporter_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005457 F GDP-fucose transmembrane transporter activity
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 F UDP-xylose transmembrane transporter activity
GO:0005794 C Golgi apparatus
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015783 P GDP-fucose transmembrane transport
GO:0015790 P UDP-xylose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030173 C integral component of Golgi membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0055085 P transmembrane transport
GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
1545 O_BomoBR101391_complete:A_BomoBR_DN29865_c0_g1_i22
157bp
 RNA-binding_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035327 C euchromatin
GO:0045292 P mRNA cis splicing, via spliceosome
1546 O_BomoBR101392_complete:A_BomoBR_DN29865_c0_g1_i22
124bp
 UDP-xylose_and_UDP-N-acetylglucosamine_transporter_isoform_X3_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005457 F GDP-fucose transmembrane transporter activity
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 F UDP-xylose transmembrane transporter activity
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006111 P regulation of gluconeogenesis
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015783 P GDP-fucose transmembrane transport
GO:0015788 P UDP-N-acetylglucosamine transmembrane transport
GO:0015790 P UDP-xylose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030173 C integral component of Golgi membrane
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0055085 P transmembrane transport
GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
1547 O_BomoBR101393_complete:A_BomoBR_DN29865_c0_g1_i23
305bp
 UDP-xylose_and_UDP-N-acetylglucosamine_transporter_isoform_X1_[Bombyx_mori]
GO:0000139 C Golgi membrane
GO:0005462 F UDP-N-acetylglucosamine transmembrane transporter activity
GO:0005464 F UDP-xylose transmembrane transporter activity
GO:0005783 C endoplasmic reticulum
GO:0005794 C Golgi apparatus
GO:0006111 P regulation of gluconeogenesis
GO:0006810 P transport
GO:0008643 P carbohydrate transport
GO:0015788 P UDP-N-acetylglucosamine transmembrane transport
GO:0015790 P UDP-xylose transmembrane transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0055085 P transmembrane transport
GO:1990569 P UDP-N-acetylglucosamine transmembrane transport
1548 O_BomoBR101394_complete:A_BomoBR_DN29865_c0_g1_i23
157bp
 RNA-binding_protein_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000398 P mRNA splicing, via spliceosome
GO:0001178 P regulation of transcriptional start site selection at RNA polymerase II promoter
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0010468 P regulation of gene expression
GO:0031440 P regulation of mRNA 3'-end processing
GO:0035327 C euchromatin
GO:0045292 P mRNA cis splicing, via spliceosome
1549 O_BomoBR101395_3prime_partial:A_BomoBR_DN29822_c4_g2_i1
398bp
 trifunctional_enzyme_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003988 F acetyl-CoA C-acyltransferase activity
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016509 F long-chain-3-hydroxyacyl-CoA dehydrogenase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
1550 O_BomoBR101396_complete:A_BomoBR_DN29822_c4_g2_i1
199bp
1551 O_BomoBR101397_complete:A_BomoBR_DN29822_c4_g2_i1
199bp
1552 O_BomoBR101398_complete:A_BomoBR_DN29822_c4_g2_i1
137bp
1553 O_BomoBR101399_complete:A_BomoBR_DN29822_c4_g3_i1
148bp
 cyclin-dependent_kinase_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0002088 P lens development in camera-type eye
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004693 F cyclin-dependent protein serine/threonine kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006281 P DNA repair
GO:0006468 P protein phosphorylation
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0009636 P response to toxic substance
GO:0015030 C Cajal body
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030332 F cyclin binding
GO:0031100 P animal organ regeneration
GO:0032355 P response to estradiol
GO:0032403 F protein-containing complex binding
GO:0032869 P cellular response to insulin stimulus
GO:0042493 P response to xenobiotic stimulus
GO:0043231 C intracellular membrane-bounded organelle
GO:0045471 P response to ethanol
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
GO:0051591 P response to cAMP
GO:0051602 P response to electrical stimulus
GO:0051726 P regulation of cell cycle
1554 O_BomoBR10139_complete:A_BomoBR_DN31333_c3_g1_i4
216bp
1555 O_BomoBR1013_complete:A_BomoBR_DN30295_c0_g1_i18
125bp
1556 O_BomoBR101400_complete:A_BomoBR_DN29822_c4_g5_i1
155bp
1557 O_BomoBR101401_5prime_partial:A_BomoBR_DN29822_c4_g5_i1
137bp
 ral_GTPase-activating_protein_subunit_beta_[Helicoverpa_armigera]
GO:0005096 F GTPase activator activity
GO:0046982 F protein heterodimerization activity
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0090630 P activation of GTPase activity
1558 O_BomoBR101402_complete:A_BomoBR_DN29822_c4_g2_i2
474bp
 trifunctional_enzyme_subunit_beta,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0003857 F 3-hydroxyacyl-CoA dehydrogenase activity
GO:0003988 F acetyl-CoA C-acyltransferase activity
GO:0004300 F enoyl-CoA hydratase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005740 C mitochondrial envelope
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0006635 P fatty acid beta-oxidation
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016509 F long-chain-3-hydroxyacyl-CoA dehydrogenase activity
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0016747 F acyltransferase activity, transferring groups other than amino-acyl groups
GO:0035965 P cardiolipin acyl-chain remodeling
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
GO:0070062 C extracellular exosome
1559 O_BomoBR101403_complete:A_BomoBR_DN29822_c4_g2_i2
293bp
1560 O_BomoBR101404_complete:A_BomoBR_DN29822_c4_g2_i2
199bp
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