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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4231 O_BomoOtmSK13809_complete:A_BomoOtmSK_comp14795_c0_seq4
279bp
 enoyl-CoA_hydratase_domain-containing_protein_3,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
4232 O_BomoOtmSK1380_internal:A_BomoOtmSK_comp4921_c0_seq1
329bp
 MAU2_chromatid_cohesion_factor_homolog_isoform_X1_[Bombyx_mori]
GO:0000785 C chromatin
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0032116 C SMC loading complex
GO:0034088 P maintenance of mitotic sister chromatid cohesion
GO:0051301 P cell division
4233 O_BomoOtmSK13810_complete:A_BomoOtmSK_comp14795_c0_seq6
171bp
 enoyl-CoA_hydratase_domain-containing_protein_3,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
4234 O_BomoOtmSK13811_complete:A_BomoOtmSK_comp14795_c0_seq6
102bp
 enoyl-CoA_hydratase_domain-containing_protein_3,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
4235 O_BomoOtmSK13812_complete:A_BomoOtmSK_comp14795_c0_seq7
184bp
 enoyl-CoA_hydratase_domain-containing_protein_3,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
4236 O_BomoOtmSK13813_complete:A_BomoOtmSK_comp14795_c0_seq7
181bp
 ADP-ribosylation_factor_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0003956 F NAD(P)+-protein-arginine ADP-ribosyltransferase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006471 P protein ADP-ribosylation
GO:0006810 P transport
GO:0007264 P small GTPase mediated signal transduction
GO:0007269 P neurotransmitter secretion
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
GO:0016197 P endosomal transport
GO:0048488 P synaptic vesicle endocytosis
GO:0048749 P compound eye development
GO:0098793 C presynapse
4237 O_BomoOtmSK13814_complete:A_BomoOtmSK_comp14795_c0_seq8
181bp
 ADP-ribosylation_factor_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0003956 F NAD(P)+-protein-arginine ADP-ribosyltransferase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006471 P protein ADP-ribosylation
GO:0006810 P transport
GO:0007264 P small GTPase mediated signal transduction
GO:0007269 P neurotransmitter secretion
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
GO:0016197 P endosomal transport
GO:0048488 P synaptic vesicle endocytosis
GO:0048749 P compound eye development
GO:0098793 C presynapse
4238 O_BomoOtmSK13815_complete:A_BomoOtmSK_comp14795_c0_seq8
171bp
 enoyl-CoA_hydratase_domain-containing_protein_3,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
4239 O_BomoOtmSK13816_complete:A_BomoOtmSK_comp14795_c0_seq8
102bp
 enoyl-CoA_hydratase_domain-containing_protein_3,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
4240 O_BomoOtmSK13817_complete:A_BomoOtmSK_comp14795_c0_seq9
102bp
 enoyl-CoA_hydratase_domain-containing_protein_3,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
4241 O_BomoOtmSK13818_complete:A_BomoOtmSK_comp14796_c0_seq1
225bp
 ribulose-phosphate_3-epimerase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004750 F D-ribulose-phosphate 3-epimerase activity
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006098 P pentose-phosphate shunt
GO:0008152 P metabolic process
GO:0009052 P pentose-phosphate shunt, non-oxidative branch
GO:0016853 F isomerase activity
GO:0016857 F racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0019323 P pentose catabolic process
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044262 P cellular carbohydrate metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
4242 O_BomoOtmSK13819_complete:A_BomoOtmSK_comp14796_c0_seq2
225bp
 ribulose-phosphate_3-epimerase_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004750 F D-ribulose-phosphate 3-epimerase activity
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006098 P pentose-phosphate shunt
GO:0008152 P metabolic process
GO:0009052 P pentose-phosphate shunt, non-oxidative branch
GO:0016853 F isomerase activity
GO:0016857 F racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0019323 P pentose catabolic process
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044262 P cellular carbohydrate metabolic process
GO:0046872 F metal ion binding
GO:0070062 C extracellular exosome
4243 O_BomoOtmSK1381_3prime_partial:A_BomoOtmSK_comp4923_c0_seq1
513bp
 spondin-2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0005788 C endoplasmic reticulum lumen
GO:0007155 P cell adhesion
GO:0031012 C extracellular matrix
GO:0036066 P protein O-linked fucosylation
GO:0046872 F metal ion binding
4244 O_BomoOtmSK13820_complete:A_BomoOtmSK_comp14797_c0_seq1
323bp
 WD_repeat_domain_61_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016593 C Cdc73/Paf1 complex
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0035327 C euchromatin
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0055087 C Ski complex
4245 O_BomoOtmSK13821_complete:A_BomoOtmSK_comp14798_c0_seq1
911bp
 uncharacterized_protein_LOC101742248_isoform_X1_[Bombyx_mori]
GO:0004649 F poly(ADP-ribose) glycohydrolase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005975 P carbohydrate metabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016045 P detection of bacterium
GO:0016787 F hydrolase activity
GO:0043231 C intracellular membrane-bounded organelle
4246 O_BomoOtmSK13822_complete:A_BomoOtmSK_comp14798_c0_seq2
143bp
 uncharacterized_protein_LOC101742248_isoform_X1_[Bombyx_mori]
GO:0004649 F poly(ADP-ribose) glycohydrolase activity
GO:0005975 P carbohydrate metabolic process
GO:0006282 P regulation of DNA repair
GO:0006970 P response to osmotic stress
GO:0006974 P cellular response to DNA damage stimulus
GO:0006979 P response to oxidative stress
GO:0009414 P response to water deprivation
GO:0016787 F hydrolase activity
GO:0048511 P rhythmic process
GO:0050832 P defense response to fungus
GO:0090332 P stomatal closure
4247 O_BomoOtmSK13823_complete:A_BomoOtmSK_comp14798_c0_seq3
831bp
 uncharacterized_protein_LOC101742248_isoform_X2_[Bombyx_mori]
GO:0004649 F poly(ADP-ribose) glycohydrolase activity
GO:0005975 P carbohydrate metabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0050832 P defense response to fungus
4248 O_BomoOtmSK13824_complete:A_BomoOtmSK_comp14798_c0_seq4
824bp
 uncharacterized_protein_LOC101742248_isoform_X3_[Bombyx_mori]
GO:0004649 F poly(ADP-ribose) glycohydrolase activity
GO:0005975 P carbohydrate metabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0016787 F hydrolase activity
GO:0050832 P defense response to fungus
4249 O_BomoOtmSK13825_complete:A_BomoOtmSK_comp14799_c0_seq1
236bp
 Bax_inhibitor-1-like_protein_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006915 P apoptotic process
GO:0006986 P response to unfolded protein
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0043066 P negative regulation of apoptotic process
4250 O_BomoOtmSK13826_complete:A_BomoOtmSK_comp14800_c0_seq1
160bp
 ubiquitin-conjugating_enzyme_E2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0007049 P cell cycle
GO:0007059 P chromosome segregation
GO:0007067 P mitotic cell cycle
GO:0007088 P regulation of mitotic nuclear division
GO:0007275 P multicellular organism development
GO:0016874 F ligase activity
GO:0016925 P protein sumoylation
GO:0019789 F SUMO transferase activity
GO:0031099 P regeneration
GO:0031625 F ubiquitin protein ligase binding
GO:0051301 P cell division
GO:0060216 P definitive hemopoiesis
GO:0061484 P hematopoietic stem cell homeostasis
GO:0061630 F ubiquitin protein ligase activity
4251 O_BomoOtmSK13827_complete:A_BomoOtmSK_comp14801_c0_seq1
464bp
 serine_protease_snake_isoform_X2_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
4252 O_BomoOtmSK13828_complete:A_BomoOtmSK_comp14801_c0_seq2
409bp
 serine_protease_snake_isoform_X2_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
4253 O_BomoOtmSK13829_complete:A_BomoOtmSK_comp14801_c0_seq3
409bp
 serine_protease_snake_isoform_X2_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
4254 O_BomoOtmSK1382_3prime_partial:A_BomoOtmSK_comp4923_c0_seq2
434bp
 spondin-2_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005615 C extracellular space
GO:0005788 C endoplasmic reticulum lumen
GO:0007155 P cell adhesion
GO:0031012 C extracellular matrix
GO:0036066 P protein O-linked fucosylation
GO:0046872 F metal ion binding
4255 O_BomoOtmSK13830_complete:A_BomoOtmSK_comp14801_c0_seq4
464bp
 serine_protease_snake_isoform_X2_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016485 P protein processing
GO:0016787 F hydrolase activity
4256 O_BomoOtmSK13831_internal:A_BomoOtmSK_comp14802_c0_seq1
578bp
 PREDICTED:_tonsoku-like_protein_[Amyelois_transitella]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0008150 P biological_process
4257 O_BomoOtmSK13832_complete:A_BomoOtmSK_comp14802_c0_seq1
101bp
4258 O_BomoOtmSK13833_complete:A_BomoOtmSK_comp14803_c0_seq1
270bp
 protein_TIS11_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0010629 P negative regulation of gene expression
GO:0016246 P RNA interference
GO:0035925 F mRNA 3'-UTR AU-rich region binding
GO:0046872 F metal ion binding
GO:0061158 P 3'-UTR-mediated mRNA destabilization
GO:1900153 P positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
4259 O_BomoOtmSK13834_complete:A_BomoOtmSK_comp14803_c0_seq2
254bp
 protein_TIS11_isoform_X2_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0010629 P negative regulation of gene expression
GO:0016246 P RNA interference
GO:0035925 F mRNA 3'-UTR AU-rich region binding
GO:0046872 F metal ion binding
GO:0061158 P 3'-UTR-mediated mRNA destabilization
GO:1900153 P positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
4260 O_BomoOtmSK13835_complete:A_BomoOtmSK_comp14805_c0_seq1
469bp
 uncharacterized_protein_LOC101743020_isoform_X1_[Bombyx_mori]
GO:0000256 P allantoin catabolic process
GO:0004038 F allantoinase activity
GO:0005575 C cellular_component
GO:0006144 P purine nucleobase metabolic process
GO:0006259 P DNA metabolic process
GO:0008270 F zinc ion binding
GO:0009442 P allantoin assimilation pathway
GO:0016787 F hydrolase activity
GO:0016810 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812 F hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0016888 F endodeoxyribonuclease activity, producing 5'-phosphomonoesters
GO:0046872 F metal ion binding
GO:0050897 F cobalt ion binding
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