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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4201 O_BomoOtmSK13782_complete:A_BomoOtmSK_comp14789_c0_seq1
112bp
4202 O_BomoOtmSK13783_complete:A_BomoOtmSK_comp14790_c0_seq1
424bp
 probable_tRNA_(uracil-O(2)-)-methyltransferase_[Helicoverpa_armigera]
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016300 F tRNA (uracil) methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0046872 F metal ion binding
4203 O_BomoOtmSK13784_complete:A_BomoOtmSK_comp14790_c0_seq1
336bp
 peroxisomal_targeting_signal_1_receptor_[Bombyx_mori]
GO:0005052 F peroxisome matrix targeting signal-1 binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0006625 P protein targeting to peroxisome
GO:0006810 P transport
GO:0008022 F protein C-terminus binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016561 P protein import into peroxisome matrix, translocation
GO:0051262 P protein tetramerization
4204 O_BomoOtmSK13785_complete:A_BomoOtmSK_comp14790_c0_seq1
237bp
 peroxisomal_targeting_signal_1_receptor_[Bombyx_mori]
4205 O_BomoOtmSK13786_5prime_partial:A_BomoOtmSK_comp14790_c0_seq2
606bp
 probable_tRNA_(uracil-O(2)-)-methyltransferase_[Helicoverpa_armigera]
GO:0005737 C cytoplasm
GO:0008033 P tRNA processing
GO:0008168 F methyltransferase activity
GO:0016300 F tRNA (uracil) methyltransferase activity
GO:0016740 F transferase activity
GO:0030488 P tRNA methylation
GO:0032259 P methylation
GO:0046872 F metal ion binding
4206 O_BomoOtmSK13787_complete:A_BomoOtmSK_comp14790_c0_seq2
336bp
 peroxisomal_targeting_signal_1_receptor_[Bombyx_mori]
GO:0005052 F peroxisome matrix targeting signal-1 binding
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005782 C peroxisomal matrix
GO:0005829 C cytosol
GO:0006625 P protein targeting to peroxisome
GO:0006810 P transport
GO:0008022 F protein C-terminus binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016561 P protein import into peroxisome matrix, translocation
GO:0051262 P protein tetramerization
4207 O_BomoOtmSK13788_complete:A_BomoOtmSK_comp14790_c0_seq2
237bp
 peroxisomal_targeting_signal_1_receptor_[Bombyx_mori]
4208 O_BomoOtmSK13789_internal:A_BomoOtmSK_comp14791_c0_seq1
892bp
 guanine_nucleotide_exchange_factor_DBS_isoform_X3_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0035091 F phosphatidylinositol binding
GO:0035556 P intracellular signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
4209 O_BomoOtmSK1378_complete:A_BomoOtmSK_comp4916_c1_seq2
242bp
 uncharacterized_protein_LOC105842600_[Bombyx_mori]
4210 O_BomoOtmSK13790_3prime_partial:A_BomoOtmSK_comp14791_c0_seq2
893bp
 guanine_nucleotide_exchange_factor_DBS_isoform_X5_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0035091 F phosphatidylinositol binding
GO:0035556 P intracellular signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
4211 O_BomoOtmSK13791_3prime_partial:A_BomoOtmSK_comp14791_c0_seq3
915bp
 guanine_nucleotide_exchange_factor_DBS_isoform_X2_[Bombyx_mori]
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005615 C extracellular space
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0012505 C endomembrane system
GO:0016020 C membrane
GO:0031234 C extrinsic component of cytoplasmic side of plasma membrane
GO:0035023 P regulation of Rho protein signal transduction
GO:0035025 P positive regulation of Rho protein signal transduction
GO:0035091 F phosphatidylinositol binding
GO:0035556 P intracellular signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
4212 O_BomoOtmSK13792_3prime_partial:A_BomoOtmSK_comp14791_c0_seq3
107bp
4213 O_BomoOtmSK13793_3prime_partial:A_BomoOtmSK_comp14792_c0_seq1
451bp
 tubulin-specific_chaperone_D_[Bombyx_mori]
GO:0000226 P microtubule cytoskeleton organization
GO:0005096 F GTPase activator activity
GO:0005737 C cytoplasm
GO:0005874 C microtubule
GO:0005886 C plasma membrane
GO:0005912 C adherens junction
GO:0005923 C bicellular tight junction
GO:0006457 P protein folding
GO:0007021 P tubulin complex assembly
GO:0007023 P post-chaperonin tubulin folding pathway
GO:0010812 P negative regulation of cell-substrate adhesion
GO:0016020 C membrane
GO:0016328 C lateral plasma membrane
GO:0030054 C cell junction
GO:0031115 P negative regulation of microtubule polymerization
GO:0034333 P adherens junction assembly
GO:0043547 P positive regulation of GTPase activity
GO:0048487 F beta-tubulin binding
GO:0070830 P bicellular tight junction assembly
4214 O_BomoOtmSK13794_5prime_partial:A_BomoOtmSK_comp14792_c0_seq1
115bp
4215 O_BomoOtmSK13795_5prime_partial:A_BomoOtmSK_comp14792_c0_seq1
103bp
4216 O_BomoOtmSK13796_3prime_partial:A_BomoOtmSK_comp14793_c0_seq1
349bp
 uncharacterized_protein_LOC101742357_isoform_X1_[Bombyx_mori]
4217 O_BomoOtmSK13797_complete:A_BomoOtmSK_comp14793_c0_seq1
224bp
4218 O_BomoOtmSK13798_3prime_partial:A_BomoOtmSK_comp14793_c0_seq3
312bp
 uncharacterized_protein_LOC101742357_isoform_X1_[Bombyx_mori]
4219 O_BomoOtmSK13799_complete:A_BomoOtmSK_comp14793_c0_seq3
224bp
4220 O_BomoOtmSK1379_3prime_partial:A_BomoOtmSK_comp4920_c0_seq1
130bp
 ras-related_protein_M-Ras_isoform_X2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005886 C plasma membrane
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0030742 F GTP-dependent protein binding
GO:0070062 C extracellular exosome
4221 O_BomoOtmSK137_internal:A_BomoOtmSK_comp526_c1_seq1
111bp
 PREDICTED:_uncharacterized_protein_LOC106138849_[Amyelois_transitella]
4222 O_BomoOtmSK13800_5prime_partial:A_BomoOtmSK_comp14794_c0_seq1
335bp
 solute_carrier_family_22_member_3_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005329 F dopamine:sodium symporter activity
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006855 P xenobiotic transmembrane transport
GO:0015101 F organic cation transmembrane transporter activity
GO:0015651 F quaternary ammonium group transmembrane transporter activity
GO:0015695 P organic cation transport
GO:0015697 P quaternary ammonium group transport
GO:0015844 P monoamine transport
GO:0015872 P dopamine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019534 F toxin transmembrane transporter activity
GO:0032098 P regulation of appetite
GO:0051608 P histamine transport
GO:0051615 P histamine uptake
GO:0055085 P transmembrane transport
GO:0072488 P ammonium transmembrane transport
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:1901998 P toxin transport
4223 O_BomoOtmSK13801_complete:A_BomoOtmSK_comp14794_c0_seq1
109bp
4224 O_BomoOtmSK13802_complete:A_BomoOtmSK_comp14794_c0_seq2
490bp
 solute_carrier_family_22_member_3_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005329 F dopamine:sodium symporter activity
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0015101 F organic cation transmembrane transporter activity
GO:0015651 F quaternary ammonium group transmembrane transporter activity
GO:0015695 P organic cation transport
GO:0015697 P quaternary ammonium group transport
GO:0015844 P monoamine transport
GO:0015872 P dopamine transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0019534 F toxin transmembrane transporter activity
GO:0022857 F transmembrane transporter activity
GO:0032098 P regulation of appetite
GO:0051608 P histamine transport
GO:0051615 P histamine uptake
GO:0055085 P transmembrane transport
GO:0072488 P ammonium transmembrane transport
GO:0098779 P positive regulation of mitophagy in response to mitochondrial depolarization
GO:1901998 P toxin transport
4225 O_BomoOtmSK13803_complete:A_BomoOtmSK_comp14794_c0_seq2
109bp
4226 O_BomoOtmSK13804_complete:A_BomoOtmSK_comp14795_c0_seq1
181bp
 ADP-ribosylation_factor_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0003956 F NAD(P)+-protein-arginine ADP-ribosyltransferase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006471 P protein ADP-ribosylation
GO:0006810 P transport
GO:0007264 P small GTPase mediated signal transduction
GO:0007269 P neurotransmitter secretion
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
GO:0016197 P endosomal transport
GO:0048488 P synaptic vesicle endocytosis
GO:0048749 P compound eye development
GO:0098793 C presynapse
4227 O_BomoOtmSK13805_complete:A_BomoOtmSK_comp14795_c0_seq1
102bp
 enoyl-CoA_hydratase_domain-containing_protein_3,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
4228 O_BomoOtmSK13806_complete:A_BomoOtmSK_comp14795_c0_seq2
279bp
 enoyl-CoA_hydratase_domain-containing_protein_3,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
4229 O_BomoOtmSK13807_complete:A_BomoOtmSK_comp14795_c0_seq2
181bp
 ADP-ribosylation_factor_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0003956 F NAD(P)+-protein-arginine ADP-ribosyltransferase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005794 C Golgi apparatus
GO:0005829 C cytosol
GO:0006471 P protein ADP-ribosylation
GO:0006810 P transport
GO:0007264 P small GTPase mediated signal transduction
GO:0007269 P neurotransmitter secretion
GO:0015031 P protein transport
GO:0016192 P vesicle-mediated transport
GO:0016197 P endosomal transport
GO:0048488 P synaptic vesicle endocytosis
GO:0048749 P compound eye development
GO:0098793 C presynapse
4230 O_BomoOtmSK13808_complete:A_BomoOtmSK_comp14795_c0_seq3
184bp
 enoyl-CoA_hydratase_domain-containing_protein_3,_mitochondrial_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0005739 C mitochondrion
GO:0008152 P metabolic process
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