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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4141 O_BomoOtmSK13728_5prime_partial:A_BomoOtmSK_comp14770_c0_seq2
949bp
 Uncharacterized_protein_OBRU01_24320,_partial_[Operophtera_brumata]
4142 O_BomoOtmSK13729_complete:A_BomoOtmSK_comp14770_c0_seq2
119bp
4143 O_BomoOtmSK1372_complete:A_BomoOtmSK_comp4909_c0_seq1
707bp
 tyrosine-protein_phosphatase_CDC14_homolog_isoform_X2_[Bombyx_mori]
GO:0000922 C spindle pole
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005819 C spindle
GO:0005856 C cytoskeleton
GO:0006470 P protein dephosphorylation
GO:0007049 P cell cycle
GO:0007096 P regulation of exit from mitosis
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008283 P cell population proliferation
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
GO:0042384 P cilium assembly
GO:0051256 P mitotic spindle midzone assembly
GO:0051301 P cell division
GO:0071850 P regulation of cell cycle
GO:0072686 C mitotic spindle
4144 O_BomoOtmSK13730_complete:A_BomoOtmSK_comp14771_c0_seq1
971bp
 ubiquitin_carboxyl-terminal_hydrolase_43_[Bombyx_mori]
GO:0005654 C nucleoplasm
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0019785 F ISG15-specific protease activity
GO:0019985 P translesion synthesis
GO:0036459 F thiol-dependent deubiquitinase
4145 O_BomoOtmSK13731_complete:A_BomoOtmSK_comp14771_c0_seq2
983bp
 ubiquitin_carboxyl-terminal_hydrolase_43_[Bombyx_mori]
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0036459 F thiol-dependent deubiquitinase
4146 O_BomoOtmSK13732_complete:A_BomoOtmSK_comp14772_c0_seq1
545bp
 Ef1alpha-like_factor_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0002184 P cytoplasmic translational termination
GO:0003747 F translation release factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006479 P protein methylation
GO:0018444 C translation release factor complex
GO:0044822 F RNA binding
4147 O_BomoOtmSK13733_complete:A_BomoOtmSK_comp14772_c0_seq2
538bp
 Ef1alpha-like_factor_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0002184 P cytoplasmic translational termination
GO:0003747 F translation release factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006479 P protein methylation
GO:0018444 C translation release factor complex
GO:0044822 F RNA binding
4148 O_BomoOtmSK13734_complete:A_BomoOtmSK_comp14772_c0_seq3
604bp
 Ef1alpha-like_factor_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0002184 P cytoplasmic translational termination
GO:0003747 F translation release factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006479 P protein methylation
GO:0018444 C translation release factor complex
GO:0044822 F RNA binding
4149 O_BomoOtmSK13735_complete:A_BomoOtmSK_comp14772_c0_seq4
597bp
 Ef1alpha-like_factor_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0002184 P cytoplasmic translational termination
GO:0003747 F translation release factor activity
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006479 P protein methylation
GO:0018444 C translation release factor complex
GO:0044822 F RNA binding
4150 O_BomoOtmSK13736_complete:A_BomoOtmSK_comp14774_c0_seq1
546bp
 FGGY_carbohydrate_kinase_domain-containing_protein_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005975 P carbohydrate metabolic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0016773 F phosphotransferase activity, alcohol group as acceptor
GO:0070050 P neuron cellular homeostasis
4151 O_BomoOtmSK13737_complete:A_BomoOtmSK_comp14775_c0_seq1
283bp
 methyltransferase-like_protein_6_[Bombyx_mori]
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
4152 O_BomoOtmSK13738_complete:A_BomoOtmSK_comp14775_c0_seq3
283bp
 methyltransferase-like_protein_6_[Bombyx_mori]
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
4153 O_BomoOtmSK13739_complete:A_BomoOtmSK_comp14775_c0_seq6
283bp
 methyltransferase-like_protein_6_[Bombyx_mori]
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
4154 O_BomoOtmSK1373_complete:A_BomoOtmSK_comp4909_c0_seq1
160bp
4155 O_BomoOtmSK13740_complete:A_BomoOtmSK_comp14775_c0_seq11
283bp
 methyltransferase-like_protein_6_[Bombyx_mori]
GO:0008168 F methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
4156 O_BomoOtmSK13741_complete:A_BomoOtmSK_comp14776_c0_seq1
452bp
 F-box_only_protein_28_[Bombyx_mori]
GO:0005515 F protein binding
4157 O_BomoOtmSK13742_complete:A_BomoOtmSK_comp14776_c0_seq1
105bp
4158 O_BomoOtmSK13743_5prime_partial:A_BomoOtmSK_comp14777_c0_seq1
291bp
 peroxisomal_membrane_protein_PMP34-like_isoform_X1_[Bombyx_mori]
GO:0000295 F adenine nucleotide transmembrane transporter activity
GO:0001561 P fatty acid alpha-oxidation
GO:0003735 F structural constituent of ribosome
GO:0005347 F ATP transmembrane transporter activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005777 C peroxisome
GO:0005778 C peroxisomal membrane
GO:0005779 C integral component of peroxisomal membrane
GO:0006412 P translation
GO:0006635 P fatty acid beta-oxidation
GO:0006810 P transport
GO:0015217 F ADP transmembrane transporter activity
GO:0015228 F coenzyme A transmembrane transporter activity
GO:0015230 F FAD transmembrane transporter activity
GO:0015866 P ADP transport
GO:0015867 P ATP transport
GO:0015908 P fatty acid transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0035349 P coenzyme A transmembrane transport
GO:0035350 P FAD transmembrane transport
GO:0043132 P NAD transport
GO:0043231 C intracellular membrane-bounded organelle
GO:0044610 F FMN transmembrane transporter activity
GO:0051087 F chaperone binding
GO:0051724 F NAD transmembrane transporter activity
GO:0055085 P transmembrane transport
GO:0080121 P AMP transport
GO:0080122 F AMP transmembrane transporter activity
GO:1901679 P nucleotide transmembrane transport
4159 O_BomoOtmSK13744_complete:A_BomoOtmSK_comp14778_c0_seq2
245bp
 bromodomain_adjacent_to_zinc_finger_domain_protein_1A_[Bombyx_mori]
GO:0000124 C SAGA complex
GO:0000775 C chromosome, centromeric region
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005829 C cytosol
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008080 F N-acetyltransferase activity
GO:0010484 F H3 histone acetyltransferase activity
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0043966 P histone H3 acetylation
GO:0046695 C SLIK (SAGA-like) complex
GO:0070577 F lysine-acetylated histone binding
4160 O_BomoOtmSK13745_5prime_partial:A_BomoOtmSK_comp14779_c0_seq1
394bp
 inhibitor_of_growth_protein_3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035064 F methylated histone binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
4161 O_BomoOtmSK13746_5prime_partial:A_BomoOtmSK_comp14779_c0_seq3
102bp
 inhibitor_of_growth_protein_3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0032777 C Piccolo NuA4 histone acetyltransferase complex
GO:0035064 F methylated histone binding
GO:0035267 C NuA4 histone acetyltransferase complex
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
4162 O_BomoOtmSK13747_5prime_partial:A_BomoOtmSK_comp14779_c0_seq4
102bp
 inhibitor_of_growth_protein_3_[Bombyx_mori]
GO:0000812 C Swr1 complex
GO:0004402 F histone acetyltransferase activity
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0040008 P regulation of growth
GO:0043065 P positive regulation of apoptotic process
GO:0043967 P histone H4 acetylation
GO:0043968 P histone H2A acetylation
GO:0046872 F metal ion binding
4163 O_BomoOtmSK13748_complete:A_BomoOtmSK_comp14780_c0_seq1
966bp
 acyl-CoA_synthetase_family_member_4_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0016878 F acid-thiol ligase activity
4164 O_BomoOtmSK13749_complete:A_BomoOtmSK_comp14780_c0_seq1
209bp
4165 O_BomoOtmSK1374_complete:A_BomoOtmSK_comp4909_c0_seq1
134bp
4166 O_BomoOtmSK13750_complete:A_BomoOtmSK_comp14780_c0_seq2
102bp
 acyl-CoA_synthetase_family_member_4_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0016878 F acid-thiol ligase activity
4167 O_BomoOtmSK13751_complete:A_BomoOtmSK_comp14780_c0_seq2
100bp
4168 O_BomoOtmSK13752_complete:A_BomoOtmSK_comp14780_c0_seq4
477bp
 acyl-CoA_synthetase_family_member_4_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003824 F catalytic activity
GO:0004043 F L-aminoadipate-semialdehyde dehydrogenase activity
GO:0005524 F ATP binding
GO:0005575 C cellular_component
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016491 F oxidoreductase activity
GO:0016874 F ligase activity
GO:0016878 F acid-thiol ligase activity
GO:0019482 P beta-alanine metabolic process
GO:0043041 P amino acid activation for nonribosomal peptide biosynthetic process
GO:0055114 P obsolete oxidation-reduction process
4169 O_BomoOtmSK13753_complete:A_BomoOtmSK_comp14780_c0_seq4
217bp
 acyl-CoA_synthetase_family_member_4_homolog_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003824 F catalytic activity
GO:0005524 F ATP binding
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016874 F ligase activity
GO:0016878 F acid-thiol ligase activity
4170 O_BomoOtmSK13754_complete:A_BomoOtmSK_comp14780_c0_seq4
109bp
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