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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
4021 O_BomoOtmSK1361_3prime_partial:A_BomoOtmSK_comp4902_c0_seq1
418bp
 protein_CASC3_isoform_X3_[Bombyx_mori]
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0006417 P regulation of translation
GO:0006810 P transport
GO:0008380 P RNA splicing
GO:0016070 P RNA metabolic process
GO:0016607 C nuclear speck
GO:0035145 C exon-exon junction complex
GO:0048471 C perinuclear region of cytoplasm
GO:0051028 P mRNA transport
4022 O_BomoOtmSK13620_complete:A_BomoOtmSK_comp14741_c0_seq2
202bp
4023 O_BomoOtmSK13621_complete:A_BomoOtmSK_comp14741_c0_seq2
159bp
4024 O_BomoOtmSK13622_complete:A_BomoOtmSK_comp14741_c0_seq2
146bp
4025 O_BomoOtmSK13623_complete:A_BomoOtmSK_comp14741_c0_seq2
122bp
4026 O_BomoOtmSK13624_complete:A_BomoOtmSK_comp14741_c0_seq2
106bp
4027 O_BomoOtmSK13625_complete:A_BomoOtmSK_comp14741_c0_seq2
104bp
4028 O_BomoOtmSK13626_5prime_partial:A_BomoOtmSK_comp14741_c0_seq3
1258bp
 laminin_subunit_alpha_[Bombyx_mori]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0008021 C synaptic vesicle
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0010906 P regulation of glucose metabolic process
GO:0016321 P female meiosis chromosome segregation
GO:0030054 C cell junction
GO:0030155 P regulation of cell adhesion
GO:0030334 P regulation of cell migration
GO:0030424 C axon
GO:0031410 C cytoplasmic vesicle
GO:0031987 P locomotion involved in locomotory behavior
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035011 P melanotic encapsulation of foreign target
GO:0036062 C presynaptic periactive zone
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0045995 P regulation of embryonic development
GO:0048598 P embryonic morphogenesis
GO:0048854 P brain morphogenesis
4029 O_BomoOtmSK13627_complete:A_BomoOtmSK_comp14741_c0_seq3
202bp
4030 O_BomoOtmSK13628_complete:A_BomoOtmSK_comp14741_c0_seq3
146bp
4031 O_BomoOtmSK13629_complete:A_BomoOtmSK_comp14741_c0_seq3
104bp
4032 O_BomoOtmSK1362_5prime_partial:A_BomoOtmSK_comp4902_c0_seq1
149bp
4033 O_BomoOtmSK13630_5prime_partial:A_BomoOtmSK_comp14741_c0_seq4
2670bp
 laminin_subunit_alpha_[Bombyx_mori]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0008021 C synaptic vesicle
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0010906 P regulation of glucose metabolic process
GO:0016321 P female meiosis chromosome segregation
GO:0030054 C cell junction
GO:0030155 P regulation of cell adhesion
GO:0030334 P regulation of cell migration
GO:0030424 C axon
GO:0031410 C cytoplasmic vesicle
GO:0031987 P locomotion involved in locomotory behavior
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035011 P melanotic encapsulation of foreign target
GO:0036062 C presynaptic periactive zone
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0045995 P regulation of embryonic development
GO:0048598 P embryonic morphogenesis
GO:0048854 P brain morphogenesis
4034 O_BomoOtmSK13631_complete:A_BomoOtmSK_comp14741_c0_seq4
275bp
4035 O_BomoOtmSK13632_complete:A_BomoOtmSK_comp14741_c0_seq4
202bp
4036 O_BomoOtmSK13633_complete:A_BomoOtmSK_comp14741_c0_seq4
202bp
4037 O_BomoOtmSK13634_complete:A_BomoOtmSK_comp14741_c0_seq4
159bp
4038 O_BomoOtmSK13635_complete:A_BomoOtmSK_comp14741_c0_seq4
146bp
4039 O_BomoOtmSK13636_complete:A_BomoOtmSK_comp14741_c0_seq4
104bp
4040 O_BomoOtmSK13637_5prime_partial:A_BomoOtmSK_comp14741_c0_seq5
3697bp
 laminin_subunit_alpha_[Bombyx_mori]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0008021 C synaptic vesicle
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0010906 P regulation of glucose metabolic process
GO:0016321 P female meiosis chromosome segregation
GO:0030054 C cell junction
GO:0030155 P regulation of cell adhesion
GO:0030334 P regulation of cell migration
GO:0030424 C axon
GO:0031410 C cytoplasmic vesicle
GO:0031987 P locomotion involved in locomotory behavior
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035011 P melanotic encapsulation of foreign target
GO:0036062 C presynaptic periactive zone
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0045995 P regulation of embryonic development
GO:0048598 P embryonic morphogenesis
GO:0048854 P brain morphogenesis
4041 O_BomoOtmSK13638_complete:A_BomoOtmSK_comp14741_c0_seq5
275bp
4042 O_BomoOtmSK13639_complete:A_BomoOtmSK_comp14741_c0_seq5
202bp
4043 O_BomoOtmSK1363_complete:A_BomoOtmSK_comp4902_c0_seq1
109bp
4044 O_BomoOtmSK13640_complete:A_BomoOtmSK_comp14741_c0_seq5
202bp
4045 O_BomoOtmSK13641_complete:A_BomoOtmSK_comp14741_c0_seq5
159bp
4046 O_BomoOtmSK13642_complete:A_BomoOtmSK_comp14741_c0_seq5
146bp
4047 O_BomoOtmSK13643_complete:A_BomoOtmSK_comp14741_c0_seq5
122bp
4048 O_BomoOtmSK13644_complete:A_BomoOtmSK_comp14741_c0_seq5
106bp
4049 O_BomoOtmSK13645_complete:A_BomoOtmSK_comp14741_c0_seq5
104bp
4050 O_BomoOtmSK13646_5prime_partial:A_BomoOtmSK_comp14741_c0_seq6
2096bp
 laminin_subunit_alpha_[Bombyx_mori]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0008021 C synaptic vesicle
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0010906 P regulation of glucose metabolic process
GO:0016321 P female meiosis chromosome segregation
GO:0030054 C cell junction
GO:0030155 P regulation of cell adhesion
GO:0030334 P regulation of cell migration
GO:0030424 C axon
GO:0031410 C cytoplasmic vesicle
GO:0031987 P locomotion involved in locomotory behavior
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035011 P melanotic encapsulation of foreign target
GO:0036062 C presynaptic periactive zone
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0045995 P regulation of embryonic development
GO:0048598 P embryonic morphogenesis
GO:0048854 P brain morphogenesis
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