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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3991 O_BomoOtmSK13593_complete:A_BomoOtmSK_comp14736_c0_seq1
407bp
 lanC-like_protein_1_isoform_X1_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004930 F G protein-coupled receptor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008152 P metabolic process
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0017124 F SH3 domain binding
GO:0043295 F glutathione binding
GO:0046872 F metal ion binding
GO:0050750 F low-density lipoprotein particle receptor binding
GO:0070062 C extracellular exosome
3992 O_BomoOtmSK13594_complete:A_BomoOtmSK_comp14736_c0_seq3
104bp
 lanC-like_protein_1_isoform_X1_[Bombyx_mori]
3993 O_BomoOtmSK13595_complete:A_BomoOtmSK_comp14737_c0_seq1
270bp
 ATP-dependent_DNA_helicase_PIF6_[Bombyx_mori]
GO:0000002 P mitochondrial genome maintenance
GO:0000166 F nucleotide binding
GO:0000287 F magnesium ion binding
GO:0000723 P telomere maintenance
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005657 C replication fork
GO:0005739 C mitochondrion
GO:0006260 P DNA replication
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006974 P cellular response to DNA damage stimulus
GO:0010521 F telomerase inhibitor activity
GO:0016787 F hydrolase activity
GO:0032211 P negative regulation of telomere maintenance via telomerase
GO:0032508 P DNA duplex unwinding
GO:0043141 F 5'-3' DNA helicase activity
GO:0044806 P G-quadruplex DNA unwinding
GO:0051276 P chromosome organization
GO:0051974 P negative regulation of telomerase activity
3994 O_BomoOtmSK13596_complete:A_BomoOtmSK_comp14737_c0_seq1
134bp
 conserved_hypothetical_protein_[Phytophthora_infestans_T30-4]
3995 O_BomoOtmSK13597_5prime_partial:A_BomoOtmSK_comp14738_c0_seq1
180bp
 ribosome_biogenesis_protein_BOP1_homolog_[Bombyx_mori]
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
GO:0043021 F ribonucleoprotein complex binding
3996 O_BomoOtmSK13598_5prime_partial:A_BomoOtmSK_comp14738_c0_seq1
116bp
 ribosome_biogenesis_protein_BOP1_homolog_[Bombyx_mori]
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
GO:0043021 F ribonucleoprotein complex binding
3997 O_BomoOtmSK13599_5prime_partial:A_BomoOtmSK_comp14738_c0_seq2
156bp
 ribosome_biogenesis_protein_BOP1_homolog_[Bombyx_mori]
GO:0000463 P maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 P maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030687 C preribosome, large subunit precursor
GO:0042254 P ribosome biogenesis
GO:0042273 P ribosomal large subunit biogenesis
GO:0043021 F ribonucleoprotein complex binding
3998 O_BomoOtmSK1359_3prime_partial:A_BomoOtmSK_comp4901_c0_seq1
284bp
 E3_ubiquitin-protein_ligase_RNF25_[Bombyx_mori]
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0051059 F NF-kappaB binding
GO:0051092 P positive regulation of NF-kappaB transcription factor activity
GO:0061630 F ubiquitin protein ligase activity
3999 O_BomoOtmSK135_internal:A_BomoOtmSK_comp518_c0_seq1
152bp
 PREDICTED:_uncharacterized_protein_LOC106651271_[Trichogramma_pretiosum]
4000 O_BomoOtmSK13600_5prime_partial:A_BomoOtmSK_comp14738_c0_seq2
112bp
4001 O_BomoOtmSK13601_complete:A_BomoOtmSK_comp14739_c0_seq2
131bp
 hypothetical_protein_[Cotesia_congregata]
4002 O_BomoOtmSK13602_complete:A_BomoOtmSK_comp14740_c0_seq1
442bp
 zinc_finger_protein_436_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
4003 O_BomoOtmSK13603_complete:A_BomoOtmSK_comp14740_c0_seq2
306bp
 zinc_finger_protein_436_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
4004 O_BomoOtmSK13604_complete:A_BomoOtmSK_comp14740_c0_seq2
106bp
 zinc_finger_protein_57_isoform_X4_[Bombyx_mori]
4005 O_BomoOtmSK13605_5prime_partial:A_BomoOtmSK_comp14741_c0_seq1
2096bp
 laminin_subunit_alpha_[Bombyx_mori]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0008021 C synaptic vesicle
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0010906 P regulation of glucose metabolic process
GO:0016321 P female meiosis chromosome segregation
GO:0030054 C cell junction
GO:0030155 P regulation of cell adhesion
GO:0030334 P regulation of cell migration
GO:0030424 C axon
GO:0031410 C cytoplasmic vesicle
GO:0031987 P locomotion involved in locomotory behavior
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035011 P melanotic encapsulation of foreign target
GO:0036062 C presynaptic periactive zone
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0045995 P regulation of embryonic development
GO:0048598 P embryonic morphogenesis
GO:0048854 P brain morphogenesis
4006 O_BomoOtmSK13606_complete:A_BomoOtmSK_comp14741_c0_seq1
810bp
 laminin_subunit_alpha_[Bombyx_mori]
GO:0001568 P blood vessel development
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0030155 P regulation of cell adhesion
GO:0030198 P extracellular matrix organization
GO:0030334 P regulation of cell migration
GO:0045995 P regulation of embryonic development
GO:0050873 P brown fat cell differentiation
GO:0070062 C extracellular exosome
4007 O_BomoOtmSK13607_complete:A_BomoOtmSK_comp14741_c0_seq1
644bp
 laminin_subunit_alpha_[Bombyx_mori]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0008021 C synaptic vesicle
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0010906 P regulation of glucose metabolic process
GO:0016321 P female meiosis chromosome segregation
GO:0030054 C cell junction
GO:0030155 P regulation of cell adhesion
GO:0030334 P regulation of cell migration
GO:0030424 C axon
GO:0031410 C cytoplasmic vesicle
GO:0031987 P locomotion involved in locomotory behavior
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035011 P melanotic encapsulation of foreign target
GO:0036062 C presynaptic periactive zone
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0045995 P regulation of embryonic development
GO:0048598 P embryonic morphogenesis
GO:0048854 P brain morphogenesis
4008 O_BomoOtmSK13608_complete:A_BomoOtmSK_comp14741_c0_seq1
275bp
4009 O_BomoOtmSK13609_complete:A_BomoOtmSK_comp14741_c0_seq1
202bp
4010 O_BomoOtmSK1360_5prime_partial:A_BomoOtmSK_comp4901_c0_seq1
103bp
4011 O_BomoOtmSK13610_complete:A_BomoOtmSK_comp14741_c0_seq1
202bp
4012 O_BomoOtmSK13611_complete:A_BomoOtmSK_comp14741_c0_seq1
159bp
4013 O_BomoOtmSK13612_complete:A_BomoOtmSK_comp14741_c0_seq1
146bp
4014 O_BomoOtmSK13613_complete:A_BomoOtmSK_comp14741_c0_seq1
122bp
4015 O_BomoOtmSK13614_complete:A_BomoOtmSK_comp14741_c0_seq1
106bp
4016 O_BomoOtmSK13615_complete:A_BomoOtmSK_comp14741_c0_seq1
104bp
4017 O_BomoOtmSK13616_5prime_partial:A_BomoOtmSK_comp14741_c0_seq2
2096bp
 laminin_subunit_alpha_[Bombyx_mori]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0008021 C synaptic vesicle
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0010906 P regulation of glucose metabolic process
GO:0016321 P female meiosis chromosome segregation
GO:0030054 C cell junction
GO:0030155 P regulation of cell adhesion
GO:0030334 P regulation of cell migration
GO:0030424 C axon
GO:0031410 C cytoplasmic vesicle
GO:0031987 P locomotion involved in locomotory behavior
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035011 P melanotic encapsulation of foreign target
GO:0036062 C presynaptic periactive zone
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0045995 P regulation of embryonic development
GO:0048598 P embryonic morphogenesis
GO:0048854 P brain morphogenesis
4018 O_BomoOtmSK13617_complete:A_BomoOtmSK_comp14741_c0_seq2
1568bp
 laminin_subunit_alpha_[Bombyx_mori]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0005102 F signaling receptor binding
GO:0005576 C extracellular region
GO:0005578 C extracellular matrix
GO:0005604 C basement membrane
GO:0005605 C basement membrane
GO:0007155 P cell adhesion
GO:0007411 P axon guidance
GO:0007417 P central nervous system development
GO:0007422 P peripheral nervous system development
GO:0007476 P imaginal disc-derived wing morphogenesis
GO:0007498 P mesoderm development
GO:0007507 P heart development
GO:0008021 C synaptic vesicle
GO:0009887 P animal organ morphogenesis
GO:0009888 P tissue development
GO:0010906 P regulation of glucose metabolic process
GO:0016321 P female meiosis chromosome segregation
GO:0030054 C cell junction
GO:0030155 P regulation of cell adhesion
GO:0030334 P regulation of cell migration
GO:0030424 C axon
GO:0031410 C cytoplasmic vesicle
GO:0031987 P locomotion involved in locomotory behavior
GO:0033627 P cell adhesion mediated by integrin
GO:0034446 P substrate adhesion-dependent cell spreading
GO:0035001 P dorsal trunk growth, open tracheal system
GO:0035011 P melanotic encapsulation of foreign target
GO:0036062 C presynaptic periactive zone
GO:0042995 C cell projection
GO:0045202 C synapse
GO:0045886 P negative regulation of synaptic assembly at neuromuscular junction
GO:0045995 P regulation of embryonic development
GO:0048598 P embryonic morphogenesis
GO:0048854 P brain morphogenesis
4019 O_BomoOtmSK13618_complete:A_BomoOtmSK_comp14741_c0_seq2
275bp
4020 O_BomoOtmSK13619_complete:A_BomoOtmSK_comp14741_c0_seq2
202bp
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