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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3811 O_BomoOtmSK13430_3prime_partial:A_BomoOtmSK_comp14649_c0_seq1
122bp
3812 O_BomoOtmSK13431_complete:A_BomoOtmSK_comp14651_c0_seq1
2033bp
 cadherin-89D_[Helicoverpa_armigera]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0046872 F metal ion binding
3813 O_BomoOtmSK13432_complete:A_BomoOtmSK_comp14651_c0_seq1
109bp
3814 O_BomoOtmSK13433_complete:A_BomoOtmSK_comp14651_c0_seq2
2033bp
 cadherin-89D_[Helicoverpa_armigera]
GO:0005509 F calcium ion binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016339 P calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0044331 P cell-cell adhesion mediated by cadherin
GO:0046872 F metal ion binding
3815 O_BomoOtmSK13434_complete:A_BomoOtmSK_comp14651_c0_seq2
109bp
3816 O_BomoOtmSK13435_complete:A_BomoOtmSK_comp14652_c1_seq2
169bp
 methionine-R-sulfoxide_reductase_B1_isoform_X2_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006979 P response to oxidative stress
GO:0007015 P actin filament organization
GO:0007411 P axon guidance
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0008407 P chaeta morphogenesis
GO:0016491 F oxidoreductase activity
GO:0016671 F oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
GO:0018206 P peptidyl-methionine modification
GO:0030041 P actin filament polymerization
GO:0030091 P protein repair
GO:0033743 F peptide-methionine (R)-S-oxide reductase activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070191 F methionine-R-sulfoxide reductase activity
3817 O_BomoOtmSK13436_complete:A_BomoOtmSK_comp14652_c1_seq3
181bp
 methionine-R-sulfoxide_reductase_B1_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006979 P response to oxidative stress
GO:0007015 P actin filament organization
GO:0007411 P axon guidance
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0008407 P chaeta morphogenesis
GO:0016491 F oxidoreductase activity
GO:0016671 F oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
GO:0018206 P peptidyl-methionine modification
GO:0030041 P actin filament polymerization
GO:0030091 P protein repair
GO:0033743 F peptide-methionine (R)-S-oxide reductase activity
GO:0046872 F metal ion binding
GO:0055114 P obsolete oxidation-reduction process
GO:0070191 F methionine-R-sulfoxide reductase activity
3818 O_BomoOtmSK13437_complete:A_BomoOtmSK_comp14653_c1_seq1
246bp
 putative_glutathione-specific_gamma-glutamylcyclotransferase_2_[Bombyx_mori]
GO:0005112 F Notch binding
GO:0005737 C cytoplasm
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0006915 P apoptotic process
GO:0006986 P response to unfolded protein
GO:0007219 P Notch signaling pathway
GO:0007399 P nervous system development
GO:0008152 P metabolic process
GO:0010955 P negative regulation of protein processing
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0022008 P neurogenesis
GO:0045746 P negative regulation of Notch signaling pathway
GO:0070059 P intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress
3819 O_BomoOtmSK13438_complete:A_BomoOtmSK_comp14657_c0_seq2
161bp
 ADP-ribosylation_factor-like_protein_6-interacting_protein_4_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
3820 O_BomoOtmSK13439_complete:A_BomoOtmSK_comp14657_c0_seq3
138bp
 ADP-ribosylation_factor-like_protein_6-interacting_protein_4_isoform_X1_[Bombyx_mori]
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
3821 O_BomoOtmSK1343_5prime_partial:A_BomoOtmSK_comp4885_c1_seq1
310bp
 PREDICTED:_solute_carrier_family_25_member_35-like_isoform_X2_[Amyelois_transitella]
GO:0003735 F structural constituent of ribosome
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006412 P translation
GO:0006810 P transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
3822 O_BomoOtmSK13440_5prime_partial:A_BomoOtmSK_comp14658_c0_seq1
258bp
 WD_repeat-containing_and_planar_cell_polarity_effector_protein_fritz_homolog_isoform_X4_[Bombyx_mori]
GO:0001736 P establishment of planar polarity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0035320 P imaginal disc-derived wing hair site selection
GO:0042995 C cell projection
3823 O_BomoOtmSK13441_5prime_partial:A_BomoOtmSK_comp14658_c0_seq2
258bp
 WD_repeat-containing_and_planar_cell_polarity_effector_protein_fritz_homolog_isoform_X4_[Bombyx_mori]
GO:0001736 P establishment of planar polarity
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005929 C cilium
GO:0016020 C membrane
GO:0030030 P cell projection organization
GO:0035320 P imaginal disc-derived wing hair site selection
GO:0042995 C cell projection
3824 O_BomoOtmSK13442_complete:A_BomoOtmSK_comp14660_c0_seq1
511bp
 Ca2_/calmodulin-dependent_protein_kinase_II_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004683 F calmodulin-dependent protein kinase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0005954 C calcium- and calmodulin-dependent protein kinase complex
GO:0006468 P protein phosphorylation
GO:0007268 P chemical synaptic transmission
GO:0007528 P neuromuscular junction development
GO:0007611 P learning or memory
GO:0007616 P long-term memory
GO:0007619 P courtship behavior
GO:0008049 P male courtship behavior
GO:0008582 P regulation of synaptic assembly at neuromuscular junction
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0019233 P sensory perception of pain
GO:0030424 C axon
GO:0030425 C dendrite
GO:0045211 C postsynaptic membrane
GO:0048786 C presynaptic active zone
GO:0051489 P regulation of filopodium assembly
GO:0060278 P regulation of ovulation
3825 O_BomoOtmSK13443_3prime_partial:A_BomoOtmSK_comp14662_c0_seq1
987bp
 MLE_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0048511 P rhythmic process
GO:0070937 C CRD-mediated mRNA stability complex
3826 O_BomoOtmSK13444_complete:A_BomoOtmSK_comp14662_c0_seq1
198bp
 MLE_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000228 C nuclear chromosome
GO:0000785 C chromatin
GO:0000805 C X chromosome
GO:0003676 F nucleic acid binding
GO:0003682 F chromatin binding
GO:0003723 F RNA binding
GO:0003724 F RNA helicase activity
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005665 C RNA polymerase II, core complex
GO:0005694 C chromosome
GO:0005700 C polytene chromosome
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0007549 P dosage compensation
GO:0008026 F helicase activity
GO:0008340 P determination of adult lifespan
GO:0009047 P dosage compensation by hyperactivation of X chromosome
GO:0016456 C X chromosome located dosage compensation complex, transcription activating
GO:0016457 P dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome
GO:0016787 F hydrolase activity
GO:0031453 P positive regulation of heterochromatin assembly
GO:0044822 F RNA binding
GO:0045433 P male courtship behavior, veined wing generated song production
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048675 P axon extension
GO:0072487 C MSL complex
3827 O_BomoOtmSK13445_complete:A_BomoOtmSK_comp14662_c0_seq1
148bp
3828 O_BomoOtmSK13446_complete:A_BomoOtmSK_comp14662_c0_seq1
113bp
3829 O_BomoOtmSK13447_complete:A_BomoOtmSK_comp14662_c0_seq1
106bp
3830 O_BomoOtmSK13448_complete:A_BomoOtmSK_comp14662_c0_seq1
100bp
3831 O_BomoOtmSK13449_3prime_partial:A_BomoOtmSK_comp14662_c0_seq2
1244bp
 MLE_protein_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006396 P RNA processing
GO:0008026 F helicase activity
GO:0016787 F hydrolase activity
GO:0030529 C ribonucleoprotein complex
GO:0044822 F RNA binding
GO:0048511 P rhythmic process
GO:0070937 C CRD-mediated mRNA stability complex
3832 O_BomoOtmSK1344_complete:A_BomoOtmSK_comp4885_c1_seq1
109bp
3833 O_BomoOtmSK13450_complete:A_BomoOtmSK_comp14662_c0_seq2
148bp
3834 O_BomoOtmSK13451_complete:A_BomoOtmSK_comp14662_c0_seq2
113bp
3835 O_BomoOtmSK13452_complete:A_BomoOtmSK_comp14662_c0_seq2
106bp
3836 O_BomoOtmSK13453_complete:A_BomoOtmSK_comp14662_c0_seq2
100bp
3837 O_BomoOtmSK13454_complete:A_BomoOtmSK_comp14665_c0_seq1
342bp
 aldo-keto_reductase_AKR2E4-like_[Bombyx_mori]
GO:0006629 P lipid metabolic process
GO:0008202 P steroid metabolic process
GO:0016491 F oxidoreductase activity
GO:0055114 P obsolete oxidation-reduction process
3838 O_BomoOtmSK13455_3prime_partial:A_BomoOtmSK_comp14667_c0_seq1
938bp
 WD_repeat_and_FYVE_domain-containing_protein_3_isoform_X3_[Bombyx_mori]
GO:0003831 F beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0005515 F protein binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005737 C cytoplasm
GO:0005776 C autophagosome
GO:0006914 P autophagy
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016234 C inclusion body
GO:0016239 P positive regulation of macroautophagy
GO:0016605 C PML body
GO:0019898 C extrinsic component of membrane
GO:0031965 C nuclear membrane
GO:0034274 C Atg12-Atg5-Atg16 complex
GO:0035973 P aggrephagy
GO:0046872 F metal ion binding
GO:0097635 C extrinsic component of autophagosome membrane
3839 O_BomoOtmSK13456_complete:A_BomoOtmSK_comp14669_c0_seq1
342bp
 aspartylglucosaminidase_[Bombyx_mori]
GO:0003948 F N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
3840 O_BomoOtmSK13457_complete:A_BomoOtmSK_comp14669_c0_seq2
254bp
 aspartylglucosaminidase_[Bombyx_mori]
GO:0003948 F N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0016787 F hydrolase activity
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