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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3331 O_BomoOtmSK1299_internal:A_BomoOtmSK_comp4852_c0_seq1
170bp
3332 O_BomoOtmSK129_3prime_partial:A_BomoOtmSK_comp495_c0_seq1
185bp
3333 O_BomoOtmSK12_internal:A_BomoOtmSK_comp78_c0_seq1
104bp
 mitochondrial_tRNA-specific_2-thiouridylase_1_[Bombyx_mori]
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0002143 P tRNA wobble position uridine thiolation
GO:0003723 F RNA binding
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0008033 P tRNA processing
GO:0016740 F transferase activity
GO:0016783 F sulfurtransferase activity
GO:0070903 P mitochondrial tRNA thio-modification
3334 O_BomoOtmSK13000_5prime_partial:A_BomoOtmSK_comp14517_c0_seq1
121bp
3335 O_BomoOtmSK13001_5prime_partial:A_BomoOtmSK_comp14518_c0_seq1
292bp
 influenza_virus_NS1A-binding_protein-like_[Bombyx_mori]
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005856 C cytoskeleton
GO:0015629 C actin cytoskeleton
GO:2001243 P negative regulation of intrinsic apoptotic signaling pathway
3336 O_BomoOtmSK13002_complete:A_BomoOtmSK_comp14518_c0_seq1
269bp
3337 O_BomoOtmSK13003_complete:A_BomoOtmSK_comp14518_c0_seq1
252bp
3338 O_BomoOtmSK13004_complete:A_BomoOtmSK_comp14518_c0_seq1
114bp
3339 O_BomoOtmSK13005_3prime_partial:A_BomoOtmSK_comp14520_c0_seq1
2314bp
 uncharacterized_protein_LOC110384064_[Helicoverpa_armigera]
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
3340 O_BomoOtmSK13006_complete:A_BomoOtmSK_comp14520_c0_seq1
231bp
3341 O_BomoOtmSK13007_complete:A_BomoOtmSK_comp14521_c0_seq1
106bp
3342 O_BomoOtmSK13008_5prime_partial:A_BomoOtmSK_comp14522_c0_seq2
131bp
 rab11_family-interacting_protein_4A_isoform_X3_[Bombyx_mori]
GO:0000910 P cytokinesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0030306 F small GTPase binding
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0032456 P endocytic recycling
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045171 C intercellular bridge
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051959 F dynein light intermediate chain binding
GO:0055037 C recycling endosome
GO:0055038 C recycling endosome membrane
GO:0061512 P protein localization to cilium
GO:0070164 P negative regulation of adiponectin secretion
3343 O_BomoOtmSK13009_5prime_partial:A_BomoOtmSK_comp14522_c0_seq3
147bp
 rab11_family-interacting_protein_4A_isoform_X4_[Bombyx_mori]
GO:0000910 P cytokinesis
GO:0005509 F calcium ion binding
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0006810 P transport
GO:0007049 P cell cycle
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0017137 F small GTPase binding
GO:0030306 F small GTPase binding
GO:0030496 C midbody
GO:0032154 C cleavage furrow
GO:0032456 P endocytic recycling
GO:0042803 F protein homodimerization activity
GO:0043231 C intracellular membrane-bounded organelle
GO:0045171 C intercellular bridge
GO:0046872 F metal ion binding
GO:0051301 P cell division
GO:0051959 F dynein light intermediate chain binding
GO:0055037 C recycling endosome
GO:0055038 C recycling endosome membrane
GO:0061512 P protein localization to cilium
GO:0070164 P negative regulation of adiponectin secretion
3344 O_BomoOtmSK1300_internal:A_BomoOtmSK_comp4852_c0_seq1
170bp
 protein_strawberry_notch_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0006355 P regulation of transcription, DNA-templated
GO:0007219 P Notch signaling pathway
GO:0008587 P imaginal disc-derived wing margin morphogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0048190 P wing disc dorsal/ventral pattern formation
3345 O_BomoOtmSK13010_internal:A_BomoOtmSK_comp14523_c0_seq1
233bp
 pol_protein_[Danaus_plexippus_plexippus]
GO:0003964 F RNA-directed DNA polymerase activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
3346 O_BomoOtmSK13011_complete:A_BomoOtmSK_comp14524_c0_seq1
185bp
 ADP-ribosylation_factor-like_protein_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005758 C mitochondrial intermembrane space
GO:0005813 C centrosome
GO:0005815 C microtubule organizing center
GO:0005856 C cytoskeleton
GO:0007049 P cell cycle
GO:0007264 P small GTPase mediated signal transduction
GO:0010811 P positive regulation of cell-substrate adhesion
GO:0015031 P protein transport
GO:0016328 C lateral plasma membrane
GO:0019003 F GDP binding
GO:0031113 P regulation of microtubule polymerization
GO:0031116 P positive regulation of microtubule polymerization
GO:0034260 P negative regulation of GTPase activity
GO:0051297 P centrosome cycle
GO:0051457 P maintenance of protein location in nucleus
GO:0070062 C extracellular exosome
GO:0070830 P bicellular tight junction assembly
3347 O_BomoOtmSK13012_complete:A_BomoOtmSK_comp14524_c0_seq3
118bp
 ADP-ribosylation_factor-like_protein_2_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005525 F GTP binding
GO:0005575 C cellular_component
GO:0005622 C intracellular anatomical structure
GO:0005829 C cytosol
GO:0006471 P protein ADP-ribosylation
GO:0007264 P small GTPase mediated signal transduction
GO:0007269 P neurotransmitter secretion
GO:0015031 P protein transport
GO:0016197 P endosomal transport
GO:0022008 P neurogenesis
GO:0048488 P synaptic vesicle endocytosis
GO:0098793 C presynapse
3348 O_BomoOtmSK13013_complete:A_BomoOtmSK_comp14527_c0_seq1
466bp
 pantothenate_kinase_3_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004594 F pantothenate kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030118 C clathrin coat
GO:0055037 C recycling endosome
GO:0071944 C cell periphery
3349 O_BomoOtmSK13014_complete:A_BomoOtmSK_comp14527_c0_seq1
111bp
3350 O_BomoOtmSK13015_complete:A_BomoOtmSK_comp14527_c0_seq2
480bp
 pantothenate_kinase_3_isoform_X1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0004594 F pantothenate kinase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005829 C cytosol
GO:0015937 P coenzyme A biosynthetic process
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0030118 C clathrin coat
GO:0055037 C recycling endosome
GO:0071944 C cell periphery
3351 O_BomoOtmSK13016_complete:A_BomoOtmSK_comp14527_c0_seq2
111bp
3352 O_BomoOtmSK13017_complete:A_BomoOtmSK_comp14528_c1_seq1
354bp
 G_protein_alpha_q_isoform_1_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001664 F G protein-coupled receptor binding
GO:0003924 F GTPase activity
GO:0004871 F obsolete signal transducer activity
GO:0005525 F GTP binding
GO:0007165 P signal transduction
GO:0007186 P G protein-coupled receptor signaling pathway
GO:0008152 P metabolic process
GO:0019001 F guanyl nucleotide binding
GO:0031683 F G-protein beta/gamma-subunit complex binding
GO:0046872 F metal ion binding
3353 O_BomoOtmSK13018_complete:A_BomoOtmSK_comp14528_c1_seq1
113bp
3354 O_BomoOtmSK13019_complete:A_BomoOtmSK_comp14529_c0_seq1
322bp
 syntaxin-18_[Bombyx_mori]
GO:0005484 F SNAP receptor activity
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0006888 P endoplasmic reticulum to Golgi vesicle-mediated transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016192 P vesicle-mediated transport
GO:0031201 C SNARE complex
GO:0061025 P membrane fusion
3355 O_BomoOtmSK1301_internal:A_BomoOtmSK_comp4852_c0_seq1
170bp
3356 O_BomoOtmSK13020_complete:A_BomoOtmSK_comp14529_c0_seq1
117bp
3357 O_BomoOtmSK13021_complete:A_BomoOtmSK_comp14529_c0_seq1
111bp
3358 O_BomoOtmSK13022_complete:A_BomoOtmSK_comp14532_c0_seq2
160bp
 acid_phosphatase_isoenzyme_[Bombyx_mori]
GO:0003993 F acid phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0004726 F non-membrane spanning protein tyrosine phosphatase activity
GO:0005737 C cytoplasm
GO:0006470 P protein dephosphorylation
GO:0016787 F hydrolase activity
GO:0035335 P peptidyl-tyrosine dephosphorylation
3359 O_BomoOtmSK13023_complete:A_BomoOtmSK_comp14533_c0_seq1
410bp
 Dual_specificity_mitogen-activated_protein_kinase_kinase_4_[Danaus_plexippus_plexippus]
GO:0000165 P MAPK cascade
GO:0000166 F nucleotide binding
GO:0004672 F protein kinase activity
GO:0004674 F protein serine/threonine kinase activity
GO:0004702 F obsolete signal transducer, downstream of receptor, with serine/threonine kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006468 P protein phosphorylation
GO:0006915 P apoptotic process
GO:0007254 P JNK cascade
GO:0007257 P obsolete activation of JUN kinase activity
GO:0009611 P response to wounding
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0034393 P positive regulation of smooth muscle cell apoptotic process
GO:0071260 P cellular response to mechanical stimulus
GO:2000672 P negative regulation of motor neuron apoptotic process
3360 O_BomoOtmSK13024_complete:A_BomoOtmSK_comp14533_c0_seq1
168bp
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