Search ORF from Assembled RNA-Seq

No.	Name Length	Chromosome No./Scaffold Id Scaffold Length	BLAST (vs nr)	Gene ontology
3241	O_BomoOtmSK12918_complete:A_BomoOtmSK_comp14484_c0_seq2 218bp	Bomo_Chr8
3242	O_BomoOtmSK12919_complete:A_BomoOtmSK_comp14484_c0_seq2 212bp	Bomo_Chr8
3243	O_BomoOtmSK1291_complete:A_BomoOtmSK_comp4845_c0_seq2 791bp	Bomo_Chr27	endothelin-converting_enzyme_homolog_isoform_X2_[Bombyx_mori]	GO:0004222 F metalloendopeptidase activity GO:0005886 C plasma membrane GO:0006508 P proteolysis GO:0008233 F peptidase activity GO:0008237 F metallopeptidase activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0016485 P protein processing GO:0016787 F hydrolase activity GO:0046872 F metal ion binding
3244	O_BomoOtmSK12920_complete:A_BomoOtmSK_comp14484_c0_seq2 123bp	Bomo_Chr8
3245	O_BomoOtmSK12921_complete:A_BomoOtmSK_comp14484_c0_seq2 102bp	Bomo_Chr8
3246	O_BomoOtmSK12922_complete:A_BomoOtmSK_comp14484_c0_seq2 102bp	Bomo_Chr8
3247	O_BomoOtmSK12923_internal:A_BomoOtmSK_comp14485_c1_seq1 134bp	Bomo_Chr25	Gag-like_protein_[Bombyx_mori]	GO:0001501 P skeletal system development GO:0005201 F extracellular matrix structural constituent GO:0005576 C extracellular region GO:0005578 C extracellular matrix GO:0005581 C collagen trimer GO:0007275 P multicellular organism development GO:0030282 P bone mineralization GO:0046872 F metal ion binding GO:0048570 P notochord morphogenesis
3248	O_BomoOtmSK12924_complete:A_BomoOtmSK_comp14487_c0_seq1 933bp	Bomo_Chr24	uncharacterized_protein_LOC101737811_isoform_X1_[Bombyx_mori]	GO:0000149 F SNARE binding GO:0000323 C lytic vacuole GO:0000775 C chromosome, centromeric region GO:0005515 F protein binding GO:0005694 C chromosome GO:0005764 C lysosome GO:0005768 C endosome GO:0005769 C early endosome GO:0005770 C late endosome GO:0005783 C endoplasmic reticulum GO:0005813 C centrosome GO:0006281 P DNA repair GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum GO:0006914 P autophagy GO:0006974 P cellular response to DNA damage stimulus GO:0007051 P spindle organization GO:0007059 P chromosome segregation GO:0010508 P positive regulation of autophagy GO:0017124 F SH3 domain binding GO:0030496 C midbody GO:0032465 P regulation of cytokinesis GO:0032801 P receptor catabolic process GO:0035493 P SNARE complex assembly GO:0043234 C protein-containing complex GO:0045335 C phagocytic vesicle GO:0046718 P viral entry into host cell GO:0051297 P centrosome cycle GO:0051684 P maintenance of Golgi location GO:0060627 P regulation of vesicle-mediated transport GO:0070418 C DNA-dependent protein kinase complex GO:0071900 P regulation of protein serine/threonine kinase activity GO:0097680 P double-strand break repair via classical nonhomologous end joining
3249	O_BomoOtmSK12925_complete:A_BomoOtmSK_comp14487_c0_seq1 143bp	Bomo_Chr24
3250	O_BomoOtmSK12926_complete:A_BomoOtmSK_comp14487_c0_seq1 124bp	Bomo_Chr24
3251	O_BomoOtmSK12927_3prime_partial:A_BomoOtmSK_comp14488_c0_seq1 154bp	Bomo_Chr27	transcription_factor_EB,_partial_[Helicoverpa_armigera]	GO:0000122 P negative regulation of transcription by RNA polymerase II GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific GO:0003677 F DNA binding GO:0003682 F chromatin binding GO:0003700 F DNA-binding transcription factor activity GO:0003705 F DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0006366 P transcription by RNA polymerase II GO:0006461 P protein-containing complex assembly GO:0007275 P multicellular organism development GO:0010468 P regulation of gene expression GO:0010628 P positive regulation of gene expression GO:0016055 P Wnt signaling pathway GO:0030154 P cell differentiation GO:0030316 P osteoclast differentiation GO:0030318 P melanocyte differentiation GO:0042127 P regulation of cell population proliferation GO:0042981 P regulation of apoptotic process GO:0043010 P camera-type eye development GO:0043066 P negative regulation of apoptotic process GO:0043234 C protein-containing complex GO:0043473 P pigmentation GO:0043565 F sequence-specific DNA binding GO:0044336 P canonical Wnt signaling pathway involved in negative regulation of apoptotic process GO:0045165 P cell fate commitment GO:0045670 P regulation of osteoclast differentiation GO:0045893 P positive regulation of transcription, DNA-templated GO:0045944 P positive regulation of transcription by RNA polymerase II GO:0046849 P bone remodeling GO:0046983 F protein dimerization activity GO:0097531 P mast cell migration GO:2000144 P positive regulation of DNA-templated transcription, initiation GO:2001141 P regulation of RNA biosynthetic process
3252	O_BomoOtmSK12928_internal:A_BomoOtmSK_comp14488_c1_seq1 198bp	Bomo_Scaf076	transcription_factor_EB_[Bombyx_mori]	GO:0003674 F molecular_function GO:0003677 F DNA binding GO:0003700 F DNA-binding transcription factor activity GO:0005575 C cellular_component GO:0005634 C nucleus GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006357 P regulation of transcription by RNA polymerase II GO:0007275 P multicellular organism development GO:0008150 P biological_process GO:0030318 P melanocyte differentiation GO:0042981 P regulation of apoptotic process GO:0043473 P pigmentation GO:0045670 P regulation of osteoclast differentiation GO:0046983 F protein dimerization activity GO:0097531 P mast cell migration
3253	O_BomoOtmSK12929_5prime_partial:A_BomoOtmSK_comp14488_c1_seq1 121bp	Bomo_Scaf076
3254	O_BomoOtmSK1292_complete:A_BomoOtmSK_comp4845_c0_seq2 138bp	Bomo_Chr27
3255	O_BomoOtmSK12930_5prime_partial:A_BomoOtmSK_comp14490_c0_seq2 190bp	Bomo_Chr11	suppressor_of_cytokine_signaling_6_[Bombyx_mori]	GO:0001772 C immunological synapse GO:0005622 C intracellular anatomical structure GO:0009968 P negative regulation of signal transduction GO:0010498 P proteasomal protein catabolic process GO:0016567 P protein ubiquitination GO:0035556 P intracellular signal transduction GO:0040008 P regulation of growth GO:0050868 P negative regulation of T cell activation
3256	O_BomoOtmSK12931_complete:A_BomoOtmSK_comp14490_c0_seq2 135bp	Bomo_Chr11	Glomulin,_partial_[Operophtera_brumata]
3257	O_BomoOtmSK12932_complete:A_BomoOtmSK_comp14490_c0_seq3 281bp	Bomo_Chr11	suppressor_of_cytokine_signaling_6_[Bombyx_mori]	GO:0001772 C immunological synapse GO:0004860 F protein kinase inhibitor activity GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0006469 P negative regulation of protein kinase activity GO:0006952 P defense response GO:0007259 P receptor signaling pathway via JAK-STAT GO:0009968 P negative regulation of signal transduction GO:0010498 P proteasomal protein catabolic process GO:0016567 P protein ubiquitination GO:0019221 P cytokine-mediated signaling pathway GO:0035556 P intracellular signal transduction GO:0040008 P regulation of growth GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT GO:0050868 P negative regulation of T cell activation
3258	O_BomoOtmSK12933_5prime_partial:A_BomoOtmSK_comp14490_c0_seq4 165bp	Bomo_Chr11	suppressor_of_cytokine_signaling_6_[Bombyx_mori]	GO:0001678 P cellular glucose homeostasis GO:0001772 C immunological synapse GO:0004860 F protein kinase inhibitor activity GO:0005515 F protein binding GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006469 P negative regulation of protein kinase activity GO:0009968 P negative regulation of signal transduction GO:0010498 P proteasomal protein catabolic process GO:0016567 P protein ubiquitination GO:0019221 P cytokine-mediated signaling pathway GO:0035556 P intracellular signal transduction GO:0040008 P regulation of growth GO:0046426 P negative regulation of receptor signaling pathway via JAK-STAT GO:0050868 P negative regulation of T cell activation
3259	O_BomoOtmSK12934_complete:A_BomoOtmSK_comp14490_c0_seq6 306bp	Bomo_Chr11	suppressor_of_cytokine_signaling_6_[Bombyx_mori]	GO:0001772 C immunological synapse GO:0005622 C intracellular anatomical structure GO:0009968 P negative regulation of signal transduction GO:0010498 P proteasomal protein catabolic process GO:0016567 P protein ubiquitination GO:0035556 P intracellular signal transduction GO:0040008 P regulation of growth GO:0050868 P negative regulation of T cell activation
3260	O_BomoOtmSK12935_complete:A_BomoOtmSK_comp14490_c0_seq6 135bp	Bomo_Chr11	Glomulin,_partial_[Operophtera_brumata]
3261	O_BomoOtmSK12936_complete:A_BomoOtmSK_comp14490_c0_seq7 183bp	Bomo_Chr11	suppressor_of_cytokine_signaling_6_[Bombyx_mori]
3262	O_BomoOtmSK12937_complete:A_BomoOtmSK_comp14490_c0_seq8 135bp	Bomo_Chr11	Glomulin,_partial_[Operophtera_brumata]
3263	O_BomoOtmSK12938_complete:A_BomoOtmSK_comp14491_c1_seq2 409bp	Bomo_Chr10	SEC14-like_protein_2_isoform_X1_[Bombyx_mori]	GO:0005215 F transporter activity GO:0005622 C intracellular anatomical structure GO:0005634 C nucleus GO:0005737 C cytoplasm GO:0005829 C cytosol GO:0006351 P transcription, DNA-templated GO:0006355 P regulation of transcription, DNA-templated GO:0006810 P transport GO:0008047 F enzyme activator activity GO:0008289 F lipid binding GO:0016021 C integral component of membrane GO:0016765 F transferase activity, transferring alkyl or aryl (other than methyl) groups GO:0043085 P positive regulation of catalytic activity GO:0045542 P positive regulation of cholesterol biosynthetic process
3264	O_BomoOtmSK12939_complete:A_BomoOtmSK_comp14491_c1_seq2 109bp	Bomo_Chr10
3265	O_BomoOtmSK1293_complete:A_BomoOtmSK_comp4845_c0_seq2 112bp	Bomo_Chr27	hypothetical_protein_SD81_43325_[Tolypothrix_campylonemoides_VB511288]
3266	O_BomoOtmSK12940_complete:A_BomoOtmSK_comp14492_c0_seq1 148bp	Bomo_Chr12	myosin-2_essential_light_chain_isoform_X1_[Helicoverpa_armigera]	GO:0005509 F calcium ion binding GO:0005515 F protein binding GO:0016459 C myosin complex GO:0016460 C myosin II complex GO:0016461 C unconventional myosin complex GO:0017022 F myosin binding GO:0030048 P actin filament-based movement GO:0031475 C myosin V complex GO:0031476 C myosin VI complex GO:0031477 C myosin VII complex GO:0032036 F myosin heavy chain binding GO:0046872 F metal ion binding
3267	O_BomoOtmSK12941_complete:A_BomoOtmSK_comp14494_c0_seq1 520bp	Bomo_Chr8	inorganic_phosphate_co-transporter_isoform_X2_[Bombyx_mori]	GO:0006810 P transport GO:0006811 P ion transport GO:0006814 P sodium ion transport GO:0006820 P anion transport GO:0015114 F phosphate ion transmembrane transporter activity GO:0015293 F symporter activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0035435 P phosphate ion transmembrane transport GO:0055085 P transmembrane transport
3268	O_BomoOtmSK12942_complete:A_BomoOtmSK_comp14494_c0_seq2 522bp	Bomo_Chr8	inorganic_phosphate_co-transporter_isoform_X1_[Bombyx_mori]	GO:0006810 P transport GO:0006811 P ion transport GO:0006814 P sodium ion transport GO:0006820 P anion transport GO:0015114 F phosphate ion transmembrane transporter activity GO:0015293 F symporter activity GO:0016020 C membrane GO:0016021 C integral component of membrane GO:0022857 F transmembrane transporter activity GO:0035435 P phosphate ion transmembrane transport GO:0055085 P transmembrane transport
3269	O_BomoOtmSK12943_3prime_partial:A_BomoOtmSK_comp14495_c0_seq1 324bp	Bomo_Chr11	uncharacterized_protein_LOC110386381_[Bombyx_mori]
3270	O_BomoOtmSK12944_3prime_partial:A_BomoOtmSK_comp14495_c0_seq2 287bp	Bomo_Chr11	uncharacterized_protein_LOC110370110_isoform_X3_[Helicoverpa_armigera]