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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
3151 O_BomoOtmSK12837_complete:A_BomoOtmSK_comp14449_c0_seq1
381bp
3152 O_BomoOtmSK12838_complete:A_BomoOtmSK_comp14449_c0_seq2
733bp
 PREDICTED:_histone-lysine_N-methyltransferase_E(z)_isoform_X1_[Papilio_xuthus]
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006723 P cuticle hydrocarbon biosynthetic process
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007517 P muscle organ development
GO:0008168 F methyltransferase activity
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0022008 P neurogenesis
GO:0032259 P methylation
GO:0035097 C histone methyltransferase complex
GO:0035098 C ESC/E(Z) complex
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0042054 F histone methyltransferase activity
GO:0042810 P pheromone metabolic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0048813 P dendrite morphogenesis
GO:0051567 P histone H3-K9 methylation
GO:0070734 P histone H3-K27 methylation
3153 O_BomoOtmSK12839_complete:A_BomoOtmSK_comp14449_c0_seq2
381bp
3154 O_BomoOtmSK1283_complete:A_BomoOtmSK_comp4840_c0_seq1
184bp
3155 O_BomoOtmSK12840_complete:A_BomoOtmSK_comp14449_c0_seq3
387bp
 PREDICTED:_histone-lysine_N-methyltransferase_E(z)_isoform_X1_[Papilio_xuthus]
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006723 P cuticle hydrocarbon biosynthetic process
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007517 P muscle organ development
GO:0008168 F methyltransferase activity
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0022008 P neurogenesis
GO:0032259 P methylation
GO:0035097 C histone methyltransferase complex
GO:0035098 C ESC/E(Z) complex
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0042054 F histone methyltransferase activity
GO:0042810 P pheromone metabolic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0048813 P dendrite morphogenesis
GO:0051567 P histone H3-K9 methylation
GO:0070734 P histone H3-K27 methylation
3156 O_BomoOtmSK12841_complete:A_BomoOtmSK_comp14449_c0_seq3
359bp
3157 O_BomoOtmSK12842_complete:A_BomoOtmSK_comp14449_c0_seq3
358bp
3158 O_BomoOtmSK12843_complete:A_BomoOtmSK_comp14449_c0_seq3
338bp
 PREDICTED:_histone-lysine_N-methyltransferase_E(z)_[Papilio_machaon]
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006723 P cuticle hydrocarbon biosynthetic process
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007517 P muscle organ development
GO:0008168 F methyltransferase activity
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0022008 P neurogenesis
GO:0032259 P methylation
GO:0035097 C histone methyltransferase complex
GO:0035098 C ESC/E(Z) complex
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0042054 F histone methyltransferase activity
GO:0042810 P pheromone metabolic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0048813 P dendrite morphogenesis
GO:0051567 P histone H3-K9 methylation
GO:0070734 P histone H3-K27 methylation
3159 O_BomoOtmSK12844_complete:A_BomoOtmSK_comp14449_c0_seq4
387bp
 PREDICTED:_histone-lysine_N-methyltransferase_E(z)_isoform_X1_[Papilio_xuthus]
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006723 P cuticle hydrocarbon biosynthetic process
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007517 P muscle organ development
GO:0008168 F methyltransferase activity
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0022008 P neurogenesis
GO:0032259 P methylation
GO:0035097 C histone methyltransferase complex
GO:0035098 C ESC/E(Z) complex
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0042054 F histone methyltransferase activity
GO:0042810 P pheromone metabolic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0048813 P dendrite morphogenesis
GO:0051567 P histone H3-K9 methylation
GO:0070734 P histone H3-K27 methylation
3160 O_BomoOtmSK12845_complete:A_BomoOtmSK_comp14449_c0_seq4
359bp
3161 O_BomoOtmSK12846_complete:A_BomoOtmSK_comp14449_c0_seq4
358bp
3162 O_BomoOtmSK12847_complete:A_BomoOtmSK_comp14449_c0_seq4
354bp
 PREDICTED:_histone-lysine_N-methyltransferase_E(z)_[Papilio_machaon]
GO:0000790 C chromatin
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006342 P heterochromatin assembly
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006723 P cuticle hydrocarbon biosynthetic process
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007517 P muscle organ development
GO:0008168 F methyltransferase activity
GO:0016458 P obsolete gene silencing
GO:0016568 P chromatin organization
GO:0016571 P histone methylation
GO:0016740 F transferase activity
GO:0018024 F histone-lysine N-methyltransferase activity
GO:0022008 P neurogenesis
GO:0032259 P methylation
GO:0035097 C histone methyltransferase complex
GO:0035098 C ESC/E(Z) complex
GO:0035186 P syncytial blastoderm mitotic cell cycle
GO:0042054 F histone methyltransferase activity
GO:0042810 P pheromone metabolic process
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046974 F histone methyltransferase activity (H3-K9 specific)
GO:0046976 F histone methyltransferase activity (H3-K27 specific)
GO:0048813 P dendrite morphogenesis
GO:0051567 P histone H3-K9 methylation
GO:0070734 P histone H3-K27 methylation
3163 O_BomoOtmSK12848_complete:A_BomoOtmSK_comp14450_c0_seq1
305bp
 protein_phosphatase_PTC7_homolog_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0005575 C cellular_component
GO:0006470 P protein dephosphorylation
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
3164 O_BomoOtmSK12849_complete:A_BomoOtmSK_comp14451_c0_seq1
397bp
 E3_ubiquitin-protein_ligase_AMFR_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0000838 C Hrd1p ubiquitin ligase ERAD-M complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral component of plasma membrane
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007568 P aging
GO:0007611 P learning or memory
GO:0008270 F zinc ion binding
GO:0009987 P cellular process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030674 F protein-macromolecule adaptor activity
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0032092 P positive regulation of protein binding
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0036513 C Derlin-1 retrotranslocation complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051087 F chaperone binding
GO:0051259 P protein complex oligomerization
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070936 P protein K48-linked ubiquitination
GO:1904264 F ubiquitin protein ligase activity
GO:1904288 F BAT3 complex binding
GO:1990381 F ubiquitin-specific protease binding
3165 O_BomoOtmSK1284_5prime_partial:A_BomoOtmSK_comp4841_c0_seq1
395bp
 TBC1_domain_family_member_23_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0032680 P regulation of tumor necrosis factor production
GO:0032755 P positive regulation of interleukin-6 production
GO:0050727 P regulation of inflammatory response
3166 O_BomoOtmSK12850_complete:A_BomoOtmSK_comp14451_c0_seq1
153bp
3167 O_BomoOtmSK12851_complete:A_BomoOtmSK_comp14451_c0_seq1
107bp
3168 O_BomoOtmSK12852_complete:A_BomoOtmSK_comp14451_c0_seq2
567bp
 E3_ubiquitin-protein_ligase_AMFR_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0000209 P protein polyubiquitination
GO:0000838 C Hrd1p ubiquitin ligase ERAD-M complex
GO:0004842 F ubiquitin-protein transferase activity
GO:0004872 F signaling receptor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005887 C integral component of plasma membrane
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007568 P aging
GO:0007611 P learning or memory
GO:0008270 F zinc ion binding
GO:0009987 P cellular process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030176 C integral component of endoplasmic reticulum membrane
GO:0030425 C dendrite
GO:0030426 C growth cone
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0030674 F protein-macromolecule adaptor activity
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0032092 P positive regulation of protein binding
GO:0034450 F ubiquitin-ubiquitin ligase activity
GO:0036513 C Derlin-1 retrotranslocation complex
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0043025 C neuronal cell body
GO:0043234 C protein-containing complex
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:0051087 F chaperone binding
GO:0051259 P protein complex oligomerization
GO:0051865 P protein autoubiquitination
GO:0061630 F ubiquitin protein ligase activity
GO:0070936 P protein K48-linked ubiquitination
GO:1904264 F ubiquitin protein ligase activity
GO:1904288 F BAT3 complex binding
GO:1990381 F ubiquitin-specific protease binding
3169 O_BomoOtmSK12853_3prime_partial:A_BomoOtmSK_comp14451_c0_seq2
195bp
3170 O_BomoOtmSK12854_5prime_partial:A_BomoOtmSK_comp14451_c0_seq2
154bp
3171 O_BomoOtmSK12855_complete:A_BomoOtmSK_comp14451_c0_seq2
153bp
3172 O_BomoOtmSK12856_complete:A_BomoOtmSK_comp14451_c0_seq2
107bp
3173 O_BomoOtmSK12857_internal:A_BomoOtmSK_comp14452_c0_seq1
187bp
 uncharacterized_protein_LOC105842936_[Bombyx_mori]
3174 O_BomoOtmSK12858_complete:A_BomoOtmSK_comp14452_c0_seq1
122bp
3175 O_BomoOtmSK12859_5prime_partial:A_BomoOtmSK_comp14452_c1_seq1
1057bp
 uncharacterized_protein_LOC105842936_[Bombyx_mori]
3176 O_BomoOtmSK1285_3prime_partial:A_BomoOtmSK_comp4843_c0_seq1
766bp
 DNA-directed_RNA_polymerase,_mitochondrial_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005515 F protein binding
GO:0005739 C mitochondrion
GO:0005759 C mitochondrial matrix
GO:0006351 P transcription, DNA-templated
GO:0006390 P mitochondrial transcription
GO:0006391 P transcription initiation from mitochondrial promoter
GO:0007005 P mitochondrion organization
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0042645 C mitochondrial nucleoid
GO:0044822 F RNA binding
3177 O_BomoOtmSK12860_complete:A_BomoOtmSK_comp14453_c1_seq1
409bp
 uncharacterized_protein_LOC110382604_[Helicoverpa_armigera]
3178 O_BomoOtmSK12861_complete:A_BomoOtmSK_comp14453_c1_seq1
139bp
3179 O_BomoOtmSK12862_complete:A_BomoOtmSK_comp14455_c0_seq1
222bp
 exosome_complex_component_RRP46_isoform_X1_[Bombyx_mori]
GO:0000176 C nuclear exosome (RNase complex)
GO:0000177 C cytoplasmic exosome (RNase complex)
GO:0000178 C exosome (RNase complex)
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006364 P rRNA processing
GO:0006401 P RNA catabolic process
GO:0016075 P rRNA catabolic process
GO:0031125 P rRNA 3'-end processing
GO:0034427 P nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0034475 P U4 snRNA 3'-end processing
GO:0035327 C euchromatin
GO:0043928 P exonucleolytic catabolism of deadenylated mRNA
GO:0045006 P DNA deamination
GO:0051607 P defense response to virus
GO:0071028 P nuclear mRNA surveillance
GO:0071051 P polyadenylation-dependent snoRNA 3'-end processing
3180 O_BomoOtmSK12863_complete:A_BomoOtmSK_comp14456_c0_seq1
986bp
 nuclear_pore_complex_protein_Nup153_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005487 F structural constituent of nuclear pore
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005643 C nuclear pore
GO:0005694 C chromosome
GO:0005719 C euchromatin
GO:0005813 C centrosome
GO:0006325 P chromatin organization
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006606 P protein import into nucleus
GO:0006607 P NLS-bearing protein import into nucleus
GO:0006810 P transport
GO:0006999 P nuclear pore organization
GO:0007184 P regulation of SMAD protein signal transduction
GO:0008270 F zinc ion binding
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016568 P chromatin organization
GO:0017056 F structural constituent of nuclear pore
GO:0019233 P sensory perception of pain
GO:0022008 P neurogenesis
GO:0031490 F chromatin DNA binding
GO:0031965 C nuclear membrane
GO:0034399 C nuclear periphery
GO:0034401 P obsolete chromatin organization involved in regulation of transcription
GO:0044613 C nuclear pore central transport channel
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051028 P mRNA transport
GO:0051298 P centrosome duplication
GO:0072686 C mitotic spindle
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