SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

previous next from show/35878
No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2641 O_BomoOtmSK12378_complete:A_BomoOtmSK_comp14302_c0_seq5
113bp
2642 O_BomoOtmSK12379_complete:A_BomoOtmSK_comp14302_c0_seq6
571bp
 UDP-glycosyltransferase_UGT40G2_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
2643 O_BomoOtmSK1237_complete:A_BomoOtmSK_comp4774_c0_seq2
111bp
2644 O_BomoOtmSK12380_complete:A_BomoOtmSK_comp14302_c0_seq6
113bp
2645 O_BomoOtmSK12381_5prime_partial:A_BomoOtmSK_comp14302_c0_seq6
109bp
2646 O_BomoOtmSK12382_complete:A_BomoOtmSK_comp14302_c0_seq7
526bp
 UDP-glucosyltransferase_protein_3_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
2647 O_BomoOtmSK12383_complete:A_BomoOtmSK_comp14302_c0_seq8
569bp
 UDP-glycosyltransferase_UGT40G2_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
2648 O_BomoOtmSK12384_complete:A_BomoOtmSK_comp14302_c0_seq8
113bp
2649 O_BomoOtmSK12385_complete:A_BomoOtmSK_comp14302_c0_seq9
577bp
 UDP-glycosyltransferase_UGT40G2_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
2650 O_BomoOtmSK12386_complete:A_BomoOtmSK_comp14302_c0_seq9
113bp
2651 O_BomoOtmSK12387_complete:A_BomoOtmSK_comp14302_c0_seq10
520bp
 UDP-glucosyltransferase_protein_3_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
2652 O_BomoOtmSK12388_complete:A_BomoOtmSK_comp14302_c0_seq11
513bp
 UDP-glycosyltransferase_UGT40A1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0008152 P metabolic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
2653 O_BomoOtmSK12389_complete:A_BomoOtmSK_comp14304_c0_seq1
452bp
 zinc_finger_protein_729_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2654 O_BomoOtmSK1238_5prime_partial:A_BomoOtmSK_comp4775_c0_seq1
210bp
 LOW_QUALITY_PROTEIN:_DNA_replication_licensing_factor_Mcm6_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0003674 F molecular_function
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0006260 P DNA replication
GO:0006270 P DNA replication initiation
GO:0007049 P cell cycle
GO:0007067 P mitotic cell cycle
GO:0016787 F hydrolase activity
GO:0032508 P DNA duplex unwinding
GO:0042555 C MCM complex
GO:0046872 F metal ion binding
GO:0051301 P cell division
2655 O_BomoOtmSK12390_complete:A_BomoOtmSK_comp14304_c0_seq2
160bp
 zinc_finger_protein_729_isoform_X1_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
2656 O_BomoOtmSK12391_3prime_partial:A_BomoOtmSK_comp14304_c0_seq4
307bp
 zinc_finger_protein_729_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0071333 P cellular response to glucose stimulus
2657 O_BomoOtmSK12392_complete:A_BomoOtmSK_comp14305_c0_seq1
215bp
 pleckstrin_homology_domain-containing_family_A_member_3_[Bombyx_mori]
GO:0005543 F phospholipid binding
GO:0005545 F 1-phosphatidylinositol binding
GO:0005794 C Golgi apparatus
GO:0008289 F lipid binding
GO:0016020 C membrane
2658 O_BomoOtmSK12393_complete:A_BomoOtmSK_comp14305_c1_seq1
505bp
 uncharacterized_protein_LOC101743404_isoform_X1_[Bombyx_mori]
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006325 P chromatin organization
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007275 P multicellular organism development
GO:0007526 P larval somatic muscle development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0016568 P chromatin organization
GO:0016577 P histone demethylation
GO:0016706 F 2-oxoglutarate-dependent dioxygenase activity
GO:0032453 F histone H3-methyl-lysine-4 demethylase activity
GO:0032922 P circadian regulation of gene expression
GO:0034647 F histone H3-tri/di/monomethyl-lysine-4 demethylase activity
GO:0034720 P histone H3-K4 demethylation
GO:0034721 P histone H3-K4 demethylation, trimethyl-H3-K4-specific
GO:0043970 P histone H3-K9 acetylation
GO:0043992 F histone acetyltransferase activity (H3-K9 specific)
GO:0045475 P locomotor rhythm
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:0070822 C Sin3-type complex
2659 O_BomoOtmSK12394_complete:A_BomoOtmSK_comp14305_c1_seq1
130bp
2660 O_BomoOtmSK12395_complete:A_BomoOtmSK_comp14306_c0_seq1
680bp
 solute_carrier_organic_anion_transporter_family_member_2A1_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006857 P oligopeptide transport
GO:0008514 F organic anion transmembrane transporter activity
GO:0009925 C basal plasma membrane
GO:0009986 C cell surface
GO:0015198 F oligopeptide transmembrane transporter activity
GO:0015347 F sodium-independent organic anion transmembrane transporter activity
GO:0015711 P organic anion transport
GO:0015732 P prostaglandin transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0043252 P sodium-independent organic anion transport
2661 O_BomoOtmSK12396_complete:A_BomoOtmSK_comp14306_c0_seq1
147bp
2662 O_BomoOtmSK12397_complete:A_BomoOtmSK_comp14306_c0_seq1
103bp
2663 O_BomoOtmSK12398_complete:A_BomoOtmSK_comp14306_c0_seq2
680bp
 solute_carrier_organic_anion_transporter_family_member_2A1_isoform_X1_[Bombyx_mori]
GO:0005215 F transporter activity
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006810 P transport
GO:0006811 P ion transport
GO:0006857 P oligopeptide transport
GO:0008514 F organic anion transmembrane transporter activity
GO:0009925 C basal plasma membrane
GO:0009986 C cell surface
GO:0015198 F oligopeptide transmembrane transporter activity
GO:0015347 F sodium-independent organic anion transmembrane transporter activity
GO:0015711 P organic anion transport
GO:0015732 P prostaglandin transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016324 C apical plasma membrane
GO:0043252 P sodium-independent organic anion transport
2664 O_BomoOtmSK12399_complete:A_BomoOtmSK_comp14306_c0_seq2
147bp
2665 O_BomoOtmSK1239_internal:A_BomoOtmSK_comp4777_c0_seq1
292bp
 R3H_domain-containing_protein_2_isoform_X2_[Bombyx_mori]
GO:0003676 F nucleic acid binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0044822 F RNA binding
2666 O_BomoOtmSK123_internal:A_BomoOtmSK_comp482_c0_seq1
174bp
 insulin-like_receptor_[Bombyx_mori]
GO:0000166 F nucleotide binding
GO:0001556 P oocyte maturation
GO:0004672 F protein kinase activity
GO:0004713 F protein tyrosine kinase activity
GO:0004714 F transmembrane receptor protein tyrosine kinase activity
GO:0005010 F insulin-like growth factor-activated receptor activity
GO:0005515 F protein binding
GO:0005520 F insulin-like growth factor binding
GO:0005524 F ATP binding
GO:0005886 C plasma membrane
GO:0005887 C integral component of plasma membrane
GO:0006468 P protein phosphorylation
GO:0007169 P transmembrane receptor protein tyrosine kinase signaling pathway
GO:0007275 P multicellular organism development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016301 F kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0018108 P peptidyl-tyrosine phosphorylation
GO:0043548 F phosphatidylinositol 3-kinase binding
GO:0043560 F insulin receptor substrate binding
GO:0046777 P protein autophosphorylation
GO:0046872 F metal ion binding
GO:0048009 P insulin-like growth factor receptor signaling pathway
GO:0051262 P protein tetramerization
2667 O_BomoOtmSK12400_complete:A_BomoOtmSK_comp14306_c0_seq2
103bp
2668 O_BomoOtmSK12401_complete:A_BomoOtmSK_comp14307_c0_seq1
146bp
 molybdopterin_synthase_catalytic_subunit_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006777 P Mo-molybdopterin cofactor biosynthetic process
GO:0016740 F transferase activity
GO:0019008 C molybdopterin synthase complex
GO:0030366 F molybdopterin synthase activity
GO:0032324 P molybdopterin cofactor biosynthetic process
2669 O_BomoOtmSK12402_complete:A_BomoOtmSK_comp14307_c0_seq2
330bp
 molybdopterin_synthase_catalytic_subunit_isoform_X1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006777 P Mo-molybdopterin cofactor biosynthetic process
GO:0016740 F transferase activity
GO:0019008 C molybdopterin synthase complex
GO:0030366 F molybdopterin synthase activity
2670 O_BomoOtmSK12403_3prime_partial:A_BomoOtmSK_comp14307_c0_seq2
101bp
previous next from show/35878

- SilkBase 1999-2023 -