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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2611 O_BomoOtmSK12350_complete:A_BomoOtmSK_comp14296_c0_seq5
341bp
 R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0034599 P cellular response to oxidative stress
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048705 P skeletal system morphogenesis
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
2612 O_BomoOtmSK12351_complete:A_BomoOtmSK_comp14296_c0_seq5
171bp
2613 O_BomoOtmSK12352_5prime_partial:A_BomoOtmSK_comp14296_c0_seq5
138bp
 hypothetical_protein_AK812_SmicGene7015_[Symbiodinium_microadriaticum]
2614 O_BomoOtmSK12353_complete:A_BomoOtmSK_comp14296_c0_seq7
315bp
 R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0034599 P cellular response to oxidative stress
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048705 P skeletal system morphogenesis
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
2615 O_BomoOtmSK12354_complete:A_BomoOtmSK_comp14296_c0_seq7
171bp
2616 O_BomoOtmSK12355_5prime_partial:A_BomoOtmSK_comp14296_c0_seq7
135bp
 hypothetical_protein_AK812_SmicGene7015_[Symbiodinium_microadriaticum]
2617 O_BomoOtmSK12356_complete:A_BomoOtmSK_comp14296_c0_seq8
341bp
 R2D2_protein_isoform_X1_[Bombyx_mori]
GO:0003723 F RNA binding
GO:0003725 F double-stranded RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006468 P protein phosphorylation
GO:0016020 C membrane
GO:0019899 F enzyme binding
GO:0030422 P production of siRNA involved in RNA interference
GO:0031047 P gene silencing by RNA
GO:0031054 P pre-miRNA processing
GO:0034599 P cellular response to oxidative stress
GO:0035196 P production of miRNAs involved in gene silencing by miRNA
GO:0042473 P outer ear morphogenesis
GO:0042474 P middle ear morphogenesis
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:0048705 P skeletal system morphogenesis
GO:2001244 P positive regulation of intrinsic apoptotic signaling pathway
2618 O_BomoOtmSK12357_complete:A_BomoOtmSK_comp14296_c0_seq8
171bp
2619 O_BomoOtmSK12358_5prime_partial:A_BomoOtmSK_comp14296_c0_seq8
138bp
 hypothetical_protein_AK812_SmicGene7015_[Symbiodinium_microadriaticum]
2620 O_BomoOtmSK12359_3prime_partial:A_BomoOtmSK_comp14297_c0_seq1
274bp
 reverse_transcriptase_[Operophtera_brumata]
2621 O_BomoOtmSK1235_complete:A_BomoOtmSK_comp4774_c0_seq1
469bp
 uncharacterized_protein_LOC101737722_[Bombyx_mori]
2622 O_BomoOtmSK12360_complete:A_BomoOtmSK_comp14297_c0_seq1
136bp
 PREDICTED:_uncharacterized_protein_LOC105390026_isoform_X1_[Plutella_xylostella]
2623 O_BomoOtmSK12361_complete:A_BomoOtmSK_comp14298_c0_seq1
574bp
 cell_division_cycle_and_apoptosis_regulator_protein_1_[Bombyx_mori]
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005641 C nuclear envelope lumen
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0030335 P positive regulation of cell migration
GO:0030374 F nuclear receptor coactivator activity
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:1903507 P negative regulation of nucleic acid-templated transcription
2624 O_BomoOtmSK12362_3prime_partial:A_BomoOtmSK_comp14298_c0_seq1
449bp
 cell_division_cycle_and_apoptosis_regulator_protein_1_[Bombyx_mori]
GO:0005737 C cytoplasm
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0007049 P cell cycle
GO:0048471 C perinuclear region of cytoplasm
2625 O_BomoOtmSK12363_3prime_partial:A_BomoOtmSK_comp14298_c0_seq2
1006bp
 cell_division_cycle_and_apoptosis_regulator_protein_1_[Bombyx_mori]
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003713 F transcription coactivator activity
GO:0003714 F transcription corepressor activity
GO:0005515 F protein binding
GO:0005641 C nuclear envelope lumen
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007049 P cell cycle
GO:0008284 P positive regulation of cell population proliferation
GO:0030335 P positive regulation of cell migration
GO:0030374 F nuclear receptor coactivator activity
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0048471 C perinuclear region of cytoplasm
GO:1903507 P negative regulation of nucleic acid-templated transcription
2626 O_BomoOtmSK12364_complete:A_BomoOtmSK_comp14299_c0_seq1
338bp
 gamma-soluble_NSF_attachment_protein_[Bombyx_mori]
GO:0005483 F soluble NSF attachment protein activity
GO:0005739 C mitochondrion
GO:0005765 C lysosomal membrane
GO:0005774 C vacuolar membrane
GO:0006810 P transport
GO:0006886 P intracellular protein transport
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0016192 P vesicle-mediated transport
GO:0019905 F syntaxin binding
GO:0031201 C SNARE complex
GO:0043209 C myelin sheath
GO:0061025 P membrane fusion
GO:0070062 C extracellular exosome
2627 O_BomoOtmSK12365_complete:A_BomoOtmSK_comp14299_c0_seq1
219bp
2628 O_BomoOtmSK12366_complete:A_BomoOtmSK_comp14301_c0_seq1
105bp
2629 O_BomoOtmSK12367_complete:A_BomoOtmSK_comp14301_c0_seq3
183bp
 serine_protease_easter_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0006952 P defense response
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016787 F hydrolase activity
GO:0031638 P zymogen activation
2630 O_BomoOtmSK12368_complete:A_BomoOtmSK_comp14301_c0_seq3
105bp
2631 O_BomoOtmSK12369_complete:A_BomoOtmSK_comp14301_c0_seq4
267bp
 serine_protease_easter_[Bombyx_mori]
GO:0004252 F serine-type endopeptidase activity
GO:0005576 C extracellular region
GO:0006508 P proteolysis
GO:0006952 P defense response
GO:0007275 P multicellular organism development
GO:0007311 P maternal specification of dorsal/ventral axis, oocyte, germ-line encoded
GO:0008063 P Toll signaling pathway
GO:0008233 F peptidase activity
GO:0008236 F serine-type peptidase activity
GO:0009950 P dorsal/ventral axis specification
GO:0016787 F hydrolase activity
GO:0031638 P zymogen activation
2632 O_BomoOtmSK1236_5prime_partial:A_BomoOtmSK_comp4774_c0_seq2
687bp
 uncharacterized_protein_LOC101737722_[Bombyx_mori]
2633 O_BomoOtmSK12370_complete:A_BomoOtmSK_comp14302_c0_seq1
518bp
 UDP-glucosyltransferase_protein_3_isoform_X1_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
2634 O_BomoOtmSK12371_complete:A_BomoOtmSK_comp14302_c0_seq2
517bp
 UDP-glycosyltransferase_UGT40G2_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
2635 O_BomoOtmSK12372_complete:A_BomoOtmSK_comp14302_c0_seq2
113bp
2636 O_BomoOtmSK12373_complete:A_BomoOtmSK_comp14302_c0_seq3
521bp
 UDP-glycosyltransferase_UGT40A1_[Bombyx_mori]
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0008152 P metabolic process
GO:0009813 P flavonoid biosynthetic process
GO:0015020 F glucuronosyltransferase activity
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
GO:0031090 C organelle membrane
GO:0043231 C intracellular membrane-bounded organelle
GO:0052696 P flavonoid glucuronidation
2637 O_BomoOtmSK12374_complete:A_BomoOtmSK_comp14302_c0_seq4
519bp
 UDP-glycosyltransferase_UGT40G2_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
2638 O_BomoOtmSK12375_complete:A_BomoOtmSK_comp14302_c0_seq4
113bp
2639 O_BomoOtmSK12376_5prime_partial:A_BomoOtmSK_comp14302_c0_seq4
109bp
2640 O_BomoOtmSK12377_complete:A_BomoOtmSK_comp14302_c0_seq5
525bp
 UDP-glycosyltransferase_UGT40G2_[Bombyx_mori]
GO:0008152 P metabolic process
GO:0016740 F transferase activity
GO:0016757 F glycosyltransferase activity
GO:0016758 F hexosyltransferase activity
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