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Last updated: 2022/11/18

Search ORF from Assembled RNA-Seq

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No. Name
Length
 Chromosome No./Scaffold Id
Scaffold Length		 BLAST (vs nr) Gene ontology
2551 O_BomoOtmSK12297_5prime_partial:A_BomoOtmSK_comp14280_c0_seq3
148bp
2552 O_BomoOtmSK12298_5prime_partial:A_BomoOtmSK_comp14280_c0_seq3
144bp
2553 O_BomoOtmSK12299_complete:A_BomoOtmSK_comp14281_c0_seq1
193bp
 phosphatidylglycerophosphatase_and_protein-tyrosine_phosphatase_1_isoform_X1_[Bombyx_mori]
GO:0004439 F phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006470 P protein dephosphorylation
GO:0006629 P lipid metabolic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008654 P phospholipid biosynthetic process
GO:0008962 F phosphatidylglycerophosphatase activity
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0022008 P neurogenesis
GO:0035335 P peptidyl-tyrosine dephosphorylation
2554 O_BomoOtmSK1229_complete:A_BomoOtmSK_comp4770_c0_seq1
175bp
2555 O_BomoOtmSK122_internal:A_BomoOtmSK_comp475_c0_seq1
133bp
 PREDICTED:_RNA-directed_DNA_polymerase_from_mobile_element_jockey-like_[Amyelois_transitella]
2556 O_BomoOtmSK12300_complete:A_BomoOtmSK_comp14281_c0_seq3
197bp
 phosphatidylglycerophosphatase_and_protein-tyrosine_phosphatase_1_isoform_X1_[Bombyx_mori]
GO:0004439 F phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004725 F protein tyrosine phosphatase activity
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0006470 P protein dephosphorylation
GO:0006629 P lipid metabolic process
GO:0006655 P phosphatidylglycerol biosynthetic process
GO:0008138 F protein tyrosine/serine/threonine phosphatase activity
GO:0008654 P phospholipid biosynthetic process
GO:0008962 F phosphatidylglycerophosphatase activity
GO:0016020 C membrane
GO:0016311 P dephosphorylation
GO:0016787 F hydrolase activity
GO:0016791 F phosphatase activity
GO:0022008 P neurogenesis
GO:0035335 P peptidyl-tyrosine dephosphorylation
2557 O_BomoOtmSK12301_complete:A_BomoOtmSK_comp14282_c0_seq2
406bp
 protein_farnesyltransferase_subunit_beta_[Bombyx_mori]
GO:0003824 F catalytic activity
GO:0004311 F farnesyltranstransferase activity
GO:0004659 F prenyltransferase activity
GO:0004660 F protein farnesyltransferase activity
GO:0005515 F protein binding
GO:0005829 C cytosol
GO:0005875 C microtubule associated complex
GO:0005965 C protein farnesyltransferase complex
GO:0008144 F obsolete drug binding
GO:0008270 F zinc ion binding
GO:0008284 P positive regulation of cell population proliferation
GO:0008285 P negative regulation of cell population proliferation
GO:0010035 P response to inorganic substance
GO:0014070 P response to organic cyclic compound
GO:0016740 F transferase activity
GO:0018343 P protein farnesylation
GO:0019840 F isoprenoid binding
GO:0022400 P regulation of rhodopsin mediated signaling pathway
GO:0034097 P response to cytokine
GO:0042060 P wound healing
GO:0042127 P regulation of cell population proliferation
GO:0042277 F peptide binding
GO:0043234 C protein-containing complex
GO:0045787 P positive regulation of cell cycle
GO:0046872 F metal ion binding
GO:0048146 P positive regulation of fibroblast proliferation
GO:0051770 P positive regulation of nitric-oxide synthase biosynthetic process
2558 O_BomoOtmSK12302_complete:A_BomoOtmSK_comp14283_c0_seq1
212bp
 vacuole_membrane_protein_1_isoform_X4_[Bombyx_mori]
GO:0000407 C phagophore assembly site
GO:0000421 C autophagosome membrane
GO:0003674 F molecular_function
GO:0005730 C nucleolus
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006887 P exocytosis
GO:0006914 P autophagy
GO:0007029 P endoplasmic reticulum organization
GO:0007030 P Golgi organization
GO:0007155 P cell adhesion
GO:0007566 P embryo implantation
GO:0010506 P regulation of autophagy
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016337 P cell-cell adhesion
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
GO:0034329 P cell junction assembly
2559 O_BomoOtmSK12303_complete:A_BomoOtmSK_comp14283_c0_seq1
144bp
2560 O_BomoOtmSK12304_complete:A_BomoOtmSK_comp14283_c0_seq2
377bp
 vacuole_membrane_protein_1_isoform_X2_[Bombyx_mori]
GO:0000407 C phagophore assembly site
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006887 P exocytosis
GO:0007029 P endoplasmic reticulum organization
GO:0007030 P Golgi organization
GO:0010506 P regulation of autophagy
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
2561 O_BomoOtmSK12305_complete:A_BomoOtmSK_comp14283_c0_seq2
144bp
2562 O_BomoOtmSK12306_5prime_partial:A_BomoOtmSK_comp14283_c0_seq3
438bp
 vacuole_membrane_protein_1_isoform_X2_[Bombyx_mori]
GO:0000407 C phagophore assembly site
GO:0005773 C vacuole
GO:0005774 C vacuolar membrane
GO:0005783 C endoplasmic reticulum
GO:0005886 C plasma membrane
GO:0006887 P exocytosis
GO:0007029 P endoplasmic reticulum organization
GO:0007030 P Golgi organization
GO:0010506 P regulation of autophagy
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0033116 C endoplasmic reticulum-Golgi intermediate compartment membrane
2563 O_BomoOtmSK12307_complete:A_BomoOtmSK_comp14283_c0_seq3
144bp
2564 O_BomoOtmSK12308_complete:A_BomoOtmSK_comp14284_c0_seq1
381bp
 protein_phosphatase_1B_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006470 P protein dephosphorylation
GO:0006499 P N-terminal protein myristoylation
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0032688 P negative regulation of interferon-beta production
GO:0035970 P peptidyl-threonine dephosphorylation
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043124 P negative regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043169 F cation binding
GO:0046872 F metal ion binding
GO:0050687 P negative regulation of defense response to virus
2565 O_BomoOtmSK12309_complete:A_BomoOtmSK_comp14284_c0_seq1
136bp
2566 O_BomoOtmSK1230_3prime_partial:A_BomoOtmSK_comp4771_c0_seq1
194bp
 E2F_transcription_factor_1_[Bombyx_mori]
GO:0001047 F core promoter sequence-specific DNA binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005667 C transcription regulator complex
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0007049 P cell cycle
GO:0008134 F transcription factor binding
GO:0051726 P regulation of cell cycle
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
GO:1990086 P lens fiber cell apoptotic process
2567 O_BomoOtmSK12310_complete:A_BomoOtmSK_comp14284_c0_seq1
119bp
2568 O_BomoOtmSK12311_complete:A_BomoOtmSK_comp14284_c0_seq2
105bp
 protein_phosphatase_1B_[Bombyx_mori]
GO:0000287 F magnesium ion binding
GO:0003824 F catalytic activity
GO:0004721 F phosphoprotein phosphatase activity
GO:0004722 F protein serine/threonine phosphatase activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006470 P protein dephosphorylation
GO:0006499 P N-terminal protein myristoylation
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0030145 F manganese ion binding
GO:0032688 P negative regulation of interferon-beta production
GO:0035970 P peptidyl-threonine dephosphorylation
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043124 P negative regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043169 F cation binding
GO:0046872 F metal ion binding
GO:0050687 P negative regulation of defense response to virus
2569 O_BomoOtmSK12312_internal:A_BomoOtmSK_comp14285_c0_seq1
156bp
2570 O_BomoOtmSK12313_3prime_partial:A_BomoOtmSK_comp14285_c0_seq2
173bp
2571 O_BomoOtmSK12314_complete:A_BomoOtmSK_comp14285_c0_seq2
111bp
 lola_[Danaus_plexippus_plexippus]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007464 P R3/R4 cell fate commitment
GO:0007526 P larval somatic muscle development
GO:0008406 P gonad development
GO:0010906 P regulation of glucose metabolic process
GO:0016199 P axon midline choice point recognition
GO:0019730 P antimicrobial humoral response
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0031987 P locomotion involved in locomotory behavior
GO:0035167 P larval lymph gland hemopoiesis
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045467 P R7 cell development
GO:0045476 P nurse cell apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
2572 O_BomoOtmSK12315_complete:A_BomoOtmSK_comp14285_c0_seq3
115bp
 PREDICTED:_longitudinals_lacking_protein,_isoform_G_isoform_X5_[Papilio_polytes]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007464 P R3/R4 cell fate commitment
GO:0007526 P larval somatic muscle development
GO:0008406 P gonad development
GO:0010906 P regulation of glucose metabolic process
GO:0016199 P axon midline choice point recognition
GO:0019730 P antimicrobial humoral response
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0031987 P locomotion involved in locomotory behavior
GO:0035167 P larval lymph gland hemopoiesis
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045467 P R7 cell development
GO:0045476 P nurse cell apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
2573 O_BomoOtmSK12316_3prime_partial:A_BomoOtmSK_comp14285_c0_seq4
196bp
2574 O_BomoOtmSK12317_complete:A_BomoOtmSK_comp14285_c0_seq4
136bp
 zinc_finger_protein_837_[Bombyx_mori]
GO:0001964 P startle response
GO:0002121 P inter-male aggressive behavior
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007275 P multicellular organism development
GO:0007399 P nervous system development
GO:0007409 P axonogenesis
GO:0007411 P axon guidance
GO:0007464 P R3/R4 cell fate commitment
GO:0007526 P larval somatic muscle development
GO:0008406 P gonad development
GO:0010906 P regulation of glucose metabolic process
GO:0016199 P axon midline choice point recognition
GO:0019730 P antimicrobial humoral response
GO:0022008 P neurogenesis
GO:0030154 P cell differentiation
GO:0031987 P locomotion involved in locomotory behavior
GO:0035167 P larval lymph gland hemopoiesis
GO:0044719 P regulation of imaginal disc-derived wing size
GO:0045467 P R7 cell development
GO:0045476 P nurse cell apoptotic process
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0048854 P brain morphogenesis
2575 O_BomoOtmSK12318_3prime_partial:A_BomoOtmSK_comp14286_c0_seq1
591bp
 myb-like_protein_I_isoform_X6_[Bombyx_mori]
2576 O_BomoOtmSK12319_3prime_partial:A_BomoOtmSK_comp14286_c0_seq2
624bp
 myb-like_protein_I_isoform_X6_[Bombyx_mori]
2577 O_BomoOtmSK1231_5prime_partial:A_BomoOtmSK_comp4772_c1_seq1
574bp
 uncharacterized_protein_CG43867_[Bombyx_mori]
GO:0003674 F molecular_function
GO:0005575 C cellular_component
GO:0005856 C cytoskeleton
GO:0008150 P biological_process
2578 O_BomoOtmSK12320_3prime_partial:A_BomoOtmSK_comp14286_c0_seq3
594bp
 myb-like_protein_I_isoform_X6_[Bombyx_mori]
2579 O_BomoOtmSK12321_3prime_partial:A_BomoOtmSK_comp14286_c0_seq4
824bp
 pericentriolar_material_1_protein_isoform_X2_[Bombyx_mori]
2580 O_BomoOtmSK12322_3prime_partial:A_BomoOtmSK_comp14286_c0_seq5
561bp
 myb-like_protein_I_isoform_X6_[Bombyx_mori]
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